Correlation of Solvent Interaction Analysis Signatures with Thermodynamic Properties and In Silico Calculations of the Structural Effects of Point Mutations in Two Proteins.

aqueous two-phase system bacteriophage T4 lysozyme conformational stability protein partitioning solvent interaction analysis staphylococcal nuclease A structural signature

Journal

International journal of molecular sciences
ISSN: 1422-0067
Titre abrégé: Int J Mol Sci
Pays: Switzerland
ID NLM: 101092791

Informations de publication

Date de publication:
06 Sep 2024
Historique:
received: 29 07 2024
revised: 29 08 2024
accepted: 05 09 2024
medline: 14 9 2024
pubmed: 14 9 2024
entrez: 14 9 2024
Statut: epublish

Résumé

The partition behavior of single and double-point mutants of bacteriophage T4 lysozyme (T4 lysozyme) and staphylococcal nuclease A was examined in different aqueous two-phase systems (ATPSs) and studied by Solvent Interaction Analysis (SIA). Additionally, the solvent accessible surface area (SASA) of modeled mutants of both proteins was calculated. The in silico calculations and the in vitro analyses of the staphylococcal nuclease and T4 lysozyme mutants correlate, indicating that the partition analysis in ATPSs provides a valid descriptor (SIA signature) covering various protein features, such as structure, structural dynamics, and conformational stability.

Identifiants

pubmed: 39273601
pii: ijms25179652
doi: 10.3390/ijms25179652
pii:
doi:

Substances chimiques

Muramidase EC 3.2.1.17
Solvents 0
Micrococcal Nuclease EC 3.1.31.1
Viral Proteins 0

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Auteurs

Amber R Titus (AR)

Cleveland Diagnostics, 3615 Superior Ave., Cleveland, OH 44114, USA.

Pedro P Madeira (PP)

Cleveland Diagnostics, 3615 Superior Ave., Cleveland, OH 44114, USA.
CICECO-Aveiro Institute of Materials, Department of Chemistry, University of Aveiro, 3810-193 Aveiro, Portugal.

Vladimir N Uversky (VN)

Department of Molecular Medicine and Byrd Alzheimer's Research Institute, Morsani College of Medicine, University of South Florida, Tampa, FL 33612, USA.

Boris Y Zaslavsky (BY)

Cleveland Diagnostics, 3615 Superior Ave., Cleveland, OH 44114, USA.

Articles similaires

Humans Meta-Analysis as Topic Sample Size Models, Statistical Computer Simulation
alpha-Synuclein Humans Animals Mice Lewy Body Disease
Humans Algorithms Software Artificial Intelligence Computer Simulation
Humans Robotic Surgical Procedures Clinical Competence Male Female

Classifications MeSH