Evolutionary cues of gene fusion and fission in plants.

Arabidopsis / genetics Gene Fusion Evolution, Molecular Genome, Plant / genetics Arabidopsis Proteins / genetics Genes, Plant / genetics
Gene fusion and fission Protein targeting Signal peptide

Journal

Plant cell reports
ISSN: 1432-203X
Titre abrégé: Plant Cell Rep
Pays: Germany
ID NLM: 9880970

Informations de publication

Date de publication:
28 Sep 2024
Historique:
received: 25 07 2024
accepted: 12 09 2024
medline: 29 9 2024
pubmed: 29 9 2024
entrez: 28 9 2024
Statut: epublish

Résumé

Here, we systematically analyzed the potential fusion and fission events of neighboring genes in Arabidopsis genome and analyzed the influence on the protein targeting.

Identifiants

DOI: 10.1007/s00299-024-03331-7 PMID: 39342028
pubmed: 39342028
doi: 10.1007/s00299-024-03331-7
pii: 10.1007/s00299-024-03331-7
doi:

Substances chimiques

Arabidopsis Proteins 0

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

245

Subventions

Organisme : Wellcome Trust
ID : 202404
Pays : United Kingdom
Organisme : Hebei Provincial Department of Science and Technology
ID : 20326336D

Informations de copyright

© 2024. The Author(s), under exclusive licence to Springer-Verlag GmbH Germany, part of Springer Nature.

Références

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doi: 10.1007/s00299-017-2131-2 pubmed: 28352967
Badrinarayanan A, Le TBK, Laub MT (2015) Bacterial chromosome organization and segregation. Annu Rev Cell Dev Biol 31:171–199
doi: 10.1146/annurev-cellbio-100814-125211 pubmed: 26566111 pmcid: 4706359
Jividen K, Li H (2014) Chimeric RNAs generated by intergenic splicing in normal and cancer cells. Genes Chromosomes Cancer 53(12):963–971
doi: 10.1002/gcc.22207 pubmed: 25131334
Lai J, An J, Seim I, Walpole C, Hoffman A, Moya L, Srinivasan S, Perry-Keene JL, Wang C, Lehman ML, Nelson CC, Clements JA, Batra J, Australian Prostate Cancer Bioresource (2016) Fusion transcript loci share many genomic features with non-fusion loci. BMC Genomics 16:1021
doi: 10.1186/s12864-015-2235-4 pubmed: 26626734 pmcid: 4667522
Lee S, Hu Y, Loo SK, Tan Y, Bhargava R, Lewis MT, Wang XS (2020) Landscape analysis of adjacent gene rearrangements reveals BCL2L14-ETV6 gene fusions in more aggressive triple-negative breast cancer. Proc Natl Acad Sci U S A 117(18):9912–9921
doi: 10.1073/pnas.1921333117 pubmed: 32321829 pmcid: 7211963
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doi: 10.1093/nar/gkab108 pubmed: 33621342 pmcid: 7969006
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Varley KE, Gertz J, Roberts BS, Davis NS, Bowling KM, Kirby MK, Nesmith AS, Oliver PG, Grizzle WE, Forero A, Buchsbaum DJ, LoBuglio AF, Myers RM (2014) Recurrent read-through fusion transcripts in breast cancer. Breast Cancer Res Treat 146(2):287–297
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Auteurs

Chuanjing An (C)

Institute of Sericulture, Chengde Medical University, Chengde, 067000, Hebei, China.
Department of Biological Science and Technology, Chengde Medical University, Chengde, 067000, Hebei, China.
ORCID: 0000-0002-6073-0115

Mengyuan Zhang (M)

College of Horticulture, Northwest A&F University, Yangling, China.

Yanru Song (Y)

College of Veterinary Medicine, China Agriculture University, Beijing, 100193, China.

Zhengwen Yan (Z)

Institute of Sericulture, Chengde Medical University, Chengde, 067000, Hebei, China.
Department of Biological Science and Technology, Chengde Medical University, Chengde, 067000, Hebei, China.

Ling Zhou (L)

Institute of Sericulture, Chengde Medical University, Chengde, 067000, Hebei, China.
Department of Biological Science and Technology, Chengde Medical University, Chengde, 067000, Hebei, China.

Yuefang Gao (Y)

College of Horticulture, Northwest A&F University, Yangling, China. yuefanggao@nwafu.edu.cn.

Jisheng Li (J)

Institute of Sericulture, Chengde Medical University, Chengde, 067000, Hebei, China. jshlee@cdmc.edu.cn.
Department of Biological Science and Technology, Chengde Medical University, Chengde, 067000, Hebei, China. jshlee@cdmc.edu.cn.

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Classifications MeSH

questionsmedicales.fr › Eucaryotes › Viridiplantae › Streptophyta › Embryophyta › Tracheobionta › Magnoliopsida › Brassicaceae › Arabidopsis › Evolutionary cues of gene fusion and fission in plants.
questionsmedicales.fr › Phénomènes génétiques › Recombinaison génétique › Fusion de gènes › Evolutionary cues of gene fusion and fission in plants.
questionsmedicales.fr › Phénomènes biologiques › Évolution biologique › Évolution moléculaire › Evolutionary cues of gene fusion and fission in plants.
questionsmedicales.fr › Phénomènes génétiques › Structures génétiques › Génome › Génome végétal › Evolutionary cues of gene fusion and fission in plants.
questionsmedicales.fr › Acides aminés, peptides et protéines › Protéines › Protéines végétales › Protéines d'Arabidopsis › Evolutionary cues of gene fusion and fission in plants.
questionsmedicales.fr › Phénomènes génétiques › Structures génétiques › Génome › Génome végétal › Gènes de plante › Evolutionary cues of gene fusion and fission in plants.