Electric fields imbue enzyme reactivity by aligning active site fragment orbitals.


Journal

Proceedings of the National Academy of Sciences of the United States of America
ISSN: 1091-6490
Titre abrégé: Proc Natl Acad Sci U S A
Pays: United States
ID NLM: 7505876

Informations de publication

Date de publication:
29 Oct 2024
Historique:
medline: 25 10 2024
pubmed: 25 10 2024
entrez: 25 10 2024
Statut: ppublish

Résumé

It is broadly recognized that intramolecular electric fields, produced by the protein scaffold and acting on the active site, facilitate enzymatic catalysis. This field effect can be described by several theoretical models, each of which is intuitive to varying degrees. In this contribution, we show that a fundamental effect of electric fields is to generate electrostatic potentials that facilitate the energetic alignment of reactant frontier orbitals. We apply this model to demystify the impact of electric fields on high-valent iron-oxo heme proteins: catalases, peroxidases, and peroxygenases/monooxygenases. Specifically, we show that this model easily accounts for the observed field-induced changes to the spin distribution within peroxidase active sites and explains the transition between epoxidation and hydroxylation pathways seen in Cytochrome P450 active site models. Thus, for the intuitive interpretation of the chemical effect of the field, the strategy involves analyzing the response of the orbitals of active site fragments, and their energetic alignment. We note that the energy difference between fragment orbitals involved in charge redistribution acts as a measure for the chemical hardness/softness of the reactive complex. This measure, and its sensitivity to electric fields, offers a single parameter model from which to quantitatively assess the effects of electric fields on reactivity and selectivity. Thus, the model provides an additional perspective to describe electrostatic preorganization and offers ways for its manipulation.

Identifiants

pubmed: 39453743
doi: 10.1073/pnas.2411976121
doi:

Substances chimiques

Peroxidases EC 1.11.1.-
Cytochrome P-450 Enzyme System 9035-51-2

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

e2411976121

Subventions

Organisme : National Science Foundation (NSF)
ID : CHE-2203366
Organisme : State of Colorado
ID : AIA-2021

Déclaration de conflit d'intérêts

Competing interests statement:The authors declare no competing interest.

Auteurs

M E Eberhart (ME)

Chemistry Department, Colorado School of Mines, Golden, CO 80401.

Timothy R Wilson (TR)

Chemistry Department, Colorado School of Mines, Golden, CO 80401.

T E Jones (TE)

Theoretical Division, Los Alamos National Laboratory, Los Alamos, NM 87545.

Anastassia N Alexandrova (AN)

Department of Chemistry and Biochemistry, University of California, Los Angeles, CA 90095.

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Classifications MeSH