The crucial role of bioimage analysts in scientific research and publication.

Bioimage analysis Bioimage analysts Bioimaging Training

Journal

Journal of cell science
ISSN: 1477-9137
Titre abrégé: J Cell Sci
Pays: England
ID NLM: 0052457

Informations de publication

Date de publication:
15 Oct 2024
Historique:
medline: 30 10 2024
pubmed: 30 10 2024
entrez: 30 10 2024
Statut: ppublish

Résumé

Bioimage analysis (BIA), a crucial discipline in biological research, overcomes the limitations of subjective analysis in microscopy through the creation and application of quantitative and reproducible methods. The establishment of dedicated BIA support within academic institutions is vital to improving research quality and efficiency and can significantly advance scientific discovery. However, a lack of training resources, limited career paths and insufficient recognition of the contributions made by bioimage analysts prevent the full realization of this potential. This Perspective - the result of the recent The Company of Biologists Workshop 'Effectively Communicating Bioimage Analysis', which aimed to summarize the global BIA landscape, categorize obstacles and offer possible solutions - proposes strategies to bring about a cultural shift towards recognizing the value of BIA by standardizing tools, improving training and encouraging formal credit for contributions. We also advocate for increased funding, standardized practices and enhanced collaboration, and we conclude with a call to action for all stakeholders to join efforts in advancing BIA.

Identifiants

pubmed: 39475207
pii: 362545
doi: 10.1242/jcs.262322
pii:
doi:

Types de publication

Journal Article Review

Langues

eng

Sous-ensembles de citation

IM

Subventions

Organisme : Chan Zuckerberg Initiative
ID : 2020-225720
Organisme : Silicon Valley Community Foundation
Organisme : NIGMS NIH HHS
ID : P41 GM135019
Pays : United States
Organisme : Cancer Research UK
ID : CC1069
Pays : United Kingdom
Organisme : Medical Research Council
ID : CC1069
Pays : United Kingdom
Organisme : Wellcome Trust
ID : CC1069
Pays : United Kingdom
Organisme : University of Helsinki
Organisme : Biocenter Finland
Organisme : Federal Ministry of Education and Research
Organisme : Sächsisches Staatsministerium für Wissenschaft, Kultur und Tourismus
ID : ScaDS.AI
Organisme : Biotechnology and Biological Sciences Research Council
ID : BB/V006169/1
Pays : United Kingdom
Organisme : Horizon Europe
ID : 101057970
Organisme : Ministerio de Ciencia, Innovación y Universidades
Organisme : Agencia Estatal de Investigación
ID : PID2023-152631OB-I00
Organisme : European Regional Development Fund
Organisme : The University of Edinburgh
Organisme : Helmholtz Association
Organisme : NIH HHS
ID : U01CA200059-06
Pays : United States
Organisme : Engineering and Physical Sciences Research Council
ID : EP/S024336/1
Organisme : University of Leeds
Organisme : National Bioinformatics Infrastructure Sweden
Organisme : SciLifeLab
Organisme : National Microscopy Infrastructure
ID : VR-RFI 2019-00217
Organisme : French National Research Agency
ID : ANR-10-INBS-04
Organisme : Academy of Finland
ID : 337531
Organisme : Morgridge Institute for Research
Organisme : Beckman Center for Light Sheet Microscopy
Organisme : University of Zurich

Informations de copyright

© 2024. Published by The Company of Biologists Ltd.

Déclaration de conflit d'intérêts

Competing interests The authors declare no competing or financial interests.

Auteurs

Beth A Cimini (BA)

Imaging Platform, Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA.

Peter Bankhead (P)

Edinburgh Pathology, Centre for Genomic & Experimental Medicine and CRUK Scotland Centre, Institute of Genetics and Cancer, The University of Edinburgh, Edinburgh EH4 2XU, UK.

Rocco D'Antuono (R)

Crick Advanced Light Microscopy STP , The Francis Crick Institute, London NW1 1AT, UK.
Department of Biomedical Engineering, School of Biological Sciences, University of Reading, Reading RG6 6AY, UK.

Elnaz Fazeli (E)

Biomedicum Imaging Unit, Faculty of Medicine and HiLIFE, University of Helsinki, FI-00014 Helsinki, Finland.

Julia Fernandez-Rodriguez (J)

Centre for Cellular Imaging, Sahlgrenska Academy, University of Gothenburg, SE-405 30 Gothenburg, Sweden.

Caterina Fuster-Barceló (C)

Bioengineering Department, Universidad Carlos III de Madrid, 28911 Madrid, Spain.

Robert Haase (R)

Center for Scalable Data Analytics and Artificial Intelligence (ScaDS.AI) Dresden/Leipzig , Universität Leipzig, 04105 Leipzig, Germany.

Helena Klara Jambor (HK)

DAViS , University of Applied Sciences of the Grisons, 7000 Chur, Switzerland.

Martin L Jones (ML)

Electron Microscopy STP , The Francis Crick Institute, London NW1 1AT, UK.

Florian Jug (F)

Fondazione Human Technopole, 20157 Milan, Italy.

Anna H Klemm (AH)

Science for Life Laboratory BioImage Informatics Facility and Department of Information Technology, Uppsala University, SE-75105 Uppsala, Sweden.

Anna Kreshuk (A)

Cell Biology and Biophysics , European Molecular Biology Laboratory, 69115 Heidelberg, Germany.

Stefania Marcotti (S)

Randall Centre for Cell and Molecular Biophysics and Research Management & Innovation Directorate , King's College London, London SE1 1UL, UK.

Gabriel G Martins (GG)

GIMM - Gulbenkian Institute for Molecular Medicine, R. Quinta Grande 6, 2780-156 Oeiras, Portugal.

Sara McArdle (S)

La Jolla Institute for Immunology, Microscopy Core Facility, San Diego, CA 92037, USA.

Kota Miura (K)

Bioimage Analysis & Research, BIO-Plaza 1062, Nishi-Furumatsu 2-26-22 Kita-ku, Okayama, 700-0927, Japan.

Arrate Muñoz-Barrutia (A)

Bioengineering Department, Universidad Carlos III de Madrid, 28911 Madrid, Spain.

Laura C Murphy (LC)

Institute of Genetics and Cancer , The University of Edinburgh, Edinburgh EH4 2XU, UK.

Michael S Nelson (MS)

University of Wisconsin-Madison, Biomedical Engineering, Madison, WI 53706, USA.

Simon F Nørrelykke (SF)

Image Analysis Collaboratory , Harvard Medical School, Boston, MA 02115, USA.

Perrine Paul-Gilloteaux (P)

Nantes Université, CHU Nantes, CNRS, Inserm, BioCore, F-44000 Nantes, France.

Thomas Pengo (T)

Minnesota Supercomputing Institute, University of Minnesota Twin Cities, Minneapolis, MN 55005, USA.

Joanna W Pylvänäinen (JW)

Åbo Akademi University, Faculty of Science and Engineering, Biosciences, 20520 Turku, Finland.

Lior Pytowski (L)

Pixel Biology Ltd, 9 South Park Court, East Avenue, Oxford OX4 1YZ, UK.

Arianna Ravera (A)

Scientific Computing and Research Support Unit, University of Lausanne, 1005 Lausanne, Switzerland.

Annika Reinke (A)

Division of Intelligent Medical Systems and Helmholtz Imaging, German Cancer Research Center (DKFZ), 69120 Heidelberg, Germany.

Yousr Rekik (Y)

Université Grenoble Alpes, CNRS, CEA, IRIG, Laboratoire de chimie et de biologie des métaux, F-38000 Grenoble, France.
Université Grenoble Alpes, CEA, IRIG, Laboratoire Modélisation et Exploration des Matériaux, F-38000 Grenoble, France.

Caterina Strambio-De-Castillia (C)

Program in Molecular Medicine, University of Massachusetts Chan Medical School, Worcester, MA 01605, USA.

Daniel Thédié (D)

Institute of Cell Biology , The University of Edinburgh, Edinburgh EH9 3FF, UK.

Virginie Uhlmann (V)

BioVisionCenter , University of Zurich, 8057 Zurich, Switzerland.

Oliver Umney (O)

School of Computing , University of Leeds, Leeds LS2 9JT, UK.

Laura Wiggins (L)

University of Sheffield, Department of Materials Science and Engineering, Sheffield S10 2TN, UK.

Kevin W Eliceiri (KW)

University of Wisconsin-Madison, Biomedical Engineering, Madison, WI 53706, USA.

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