Caleb M Radens

Affiliations
  • Cell and Molecular Biology Graduate Group, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania 19104, USA.

Publications (8)

Meta-analysis of transcriptomic variation in T-cell populations reveals both variable and consistent signatures of gene expression and splicing.

RNA (New York, N.Y.)
Avec: Caleb M Radens , Davia Blake , Paul Jewell , Yoseph Barash , Kristen W Lynch

Alternative splicing of apoptosis genes promotes human T cell survival.

eLife
Avec: Davia Blake , Caleb M Radens , Max B Ferretti , Matthew R Gazzara , Kristen W Lynch

Deep profiling and custom databases improve detection of proteoforms generated by alternative splicing.

Genome research
Avec: Laura M Agosto , Matthew R Gazzara , Caleb M Radens , Simone Sidoli , Josue Baeza , Benjamin A Garcia , Kristen W Lynch

RNA splicing analysis using heterogeneous and large RNA-seq datasets.

Nature communications
Avec: Jorge Vaquero-Garcia , Joseph K Aicher , San Jewell , Matthew R Gazzara , Caleb M Radens , Anupama Jha , Scott S Norton , Nicholas F Lahens , Gregory R Grant , Yoseph Barash

MOCCASIN: a method for correcting for known and unknown confounders in RNA splicing analysis.

Nature communications
Avec: Barry Slaff , Caleb M Radens , Paul Jewell , Anupama Jha , Nicholas F Lahens , Gregory R Grant , Andrei Thomas-Tikhonenko , Kristen W Lynch , Yoseph Barash

An Alternatively Spliced Gain-of-Function NT5C2 Isoform Contributes to Chemoresistance in Acute Lymphoblastic Leukemia.

bioRxiv : the preprint server for biology
Avec: Manuel Torres-Diz , Clara Reglero , Catherine D Falkenstein , Annette Castro , Katharina E Hayer , Caleb M Radens , Mathieu Quesnel-Vallières , Zhiwei Ang , Priyanka Sehgal , Marilyn M Li , Yoseph Barash , Sarah K Tasian , Adolfo Ferrando , Andrei Thomas-Tikhonenko

An Alternatively Spliced Gain-of-Function NT5C2 Isoform Contributes to Chemoresistance in Acute Lymphoblastic Leukemia.

Cancer research
Avec: Manuel Torres-Diz , Clara Reglero , Catherine D Falkenstein , Annette Castro , Katharina E Hayer , Caleb M Radens , Mathieu Quesnel-Vallières , Zhiwei Ang , Priyanka Sehgal , Marilyn M Li , Yoseph Barash , Sarah K Tasian , Adolfo Ferrando , Andrei Thomas-Tikhonenko

Machine learning-optimized targeted detection of alternative splicing.

bioRxiv : the preprint server for biology
Avec: Kevin Yang , Nathaniel Islas , San Jewell , Anupama Jha , Caleb M Radens , Jeffrey A Pleiss , Kristen W Lynch , Yoseph Barash , Peter S Choi

Réseau de co-auteurs

Yoseph Barash 6 collaborations
Kristen W Lynch 5 collaborations
Matthew R Gazzara 3 collaborations
Anupama Jha 3 collaborations
Andrei Thomas-Tikhonenko 3 collaborations
Davia Blake 2 collaborations
Paul Jewell 2 collaborations
San Jewell 2 collaborations
Nicholas F Lahens 2 collaborations
Gregory R Grant 2 collaborations
Manuel Torres-Diz 2 collaborations
Clara Reglero 2 collaborations
Catherine D Falkenstein 2 collaborations
Annette Castro 2 collaborations
Katharina E Hayer 2 collaborations
Mathieu Quesnel-Vallières 2 collaborations
Zhiwei Ang 2 collaborations
Priyanka Sehgal 2 collaborations
Marilyn M Li 2 collaborations
Sarah K Tasian 2 collaborations
Adolfo Ferrando 2 collaborations
Max B Ferretti 1 collaboration
Laura M Agosto 1 collaboration
Simone Sidoli 1 collaboration
Josue Baeza 1 collaboration
Benjamin A Garcia 1 collaboration
Jorge Vaquero-Garcia 1 collaboration
Joseph K Aicher 1 collaboration
Scott S Norton 1 collaboration
Barry Slaff 1 collaboration
Kevin Yang 1 collaboration
Nathaniel Islas 1 collaboration
Jeffrey A Pleiss 1 collaboration
Peter S Choi 1 collaboration