Daniel A Orringer

Affiliations

Department of Neurosurgery, New York University, New York, NY, USA.

ORCID: 0000-0001-6427-8376

Publications (29)

An automated tissue-to-diagnosis pipeline using intraoperative stimulated Raman histology and deep learning.

Molecular & cellular oncology

Avec: Todd C Hollon , Daniel A Orringer

A Data-Driven Approach to Predicting 5-Aminolevulinic Acid-Induced Fluorescence and World Health Organization Grade in Newly Diagnosed Diffuse Gliomas.

Neurosurgery

Avec: Michael Müther , Mohammed Jaber , Timothy D Johnson , Daniel A Orringer , Walter Stummer

Stimulated Raman histology, a novel method to allow for rapid pathologic examination of unprocessed, fresh prostate biopsies.

The Prostate

Avec: Miles P Mannas , Derek Jones , Fang-Ming Deng , Deepthi Hoskoppal , Jonathan Melamed , Daniel A Orringer , Samir S Taneja

Hierarchical discriminative learning improves visual representations of biomedical microscopy.

Proceedings. IEEE Computer Society Conference on Computer Vision and Pattern Recognition

Avec: Cheng Jiang , Xinhai Hou , Akhil Kondepudi , Asadur Chowdury , Christian W Freudiger , Daniel A Orringer , Honglak Lee , Todd C Hollon

Clinical Translation of Stimulated Raman Histology.

Methods in molecular biology (Clifton, N.J.)

Avec: Cordelia Orillac , Todd Hollon , Daniel A Orringer

OpenSRH: optimizing brain tumor surgery using intraoperative stimulated Raman histology.

Advances in neural information processing systems

Avec: Cheng Jiang , Asadur Chowdury , Xinhai Hou , Akhil Kondepudi , Christian W Freudiger , Kyle Conway , Sandra Camelo-Piragua , Daniel A Orringer , Honglak Lee , Todd C Hollon

Posterior Fossa Craniotomy for Adherent Fourth Ventricle Neurocysticercosis.

Operative neurosurgery (Hagerstown, Md.)

Avec: Lynze R Franko , Balaji Pandian , Avneesh Gupta , Luis E Savastano , Kevin S Chen , James Riddell , Daniel A Orringer

Automated histologic diagnosis of CNS tumors with machine learning.

CNS oncology

Avec: Siri Sahib S Khalsa , Todd C Hollon , Arjun Adapa , Esteban Urias , Sudharsan Srinivasan , Neil Jairath , Julianne Szczepanski , Peter Ouillette , Sandra Camelo-Piragua , Daniel A Orringer

Laser interstitial thermal therapy.

Neuro-oncology advances

Avec: Katherine G Holste , Daniel A Orringer

Fluorescence Guidance and Intraoperative Adjuvants to Maximize Extent of Resection.

Neurosurgery

Avec: Cordelia Orillac , Walter Stummer , Daniel A Orringer

Label-free brain tumor imaging using Raman-based methods.

Journal of neuro-oncology

Avec: Todd Hollon , Daniel A Orringer

Rapid Automated Analysis of Skull Base Tumor Specimens Using Intraoperative Optical Imaging and Artificial Intelligence.

Neurosurgery

Avec: Cheng Jiang , Abhishek Bhattacharya , Joseph R Linzey , Rushikesh S Joshi , Sung Jik Cha , Sudharsan Srinivasan , Daniel Alber , Akhil Kondepudi , Esteban Urias , Balaji Pandian , Wajd N Al-Holou , Stephen E Sullivan , B Gregory Thompson , Jason A Heth , Christian W Freudiger , Siri Sahib S Khalsa , Donato R Pacione , John G Golfinos , Sandra Camelo-Piragua , Daniel A Orringer , Honglak Lee , Todd C Hollon

Prognostic value of DNA methylation subclassification, aneuploidy, and CDKN2A/B homozygous deletion in predicting clinical outcome of IDH mutant astrocytomas.

Neuro-oncology

Avec: Kristyn Galbraith , Mekka Garcia , Siyu Wei , Anna Chen , Chanel Schroff , Jonathan Serrano , Donato Pacione , Dimitris G Placantonakis , Christopher M William , Arline Faustin , David Zagzag , Marissa Barbaro , Maria Del Pilar Guillermo Prieto Eibl , Mitsuaki Shirahata , David Reuss , Quynh T Tran , Zahangir Alom , Andreas von Deimling , Brent A Orr , Erik P Sulman , John G Golfinos , Daniel A Orringer , Rajan Jain , Evan Lieberman , Yang Feng , Matija Snuderl

Artificial-intelligence-based molecular classification of diffuse gliomas using rapid, label-free optical imaging.

Nature medicine

Avec: Todd Hollon , Cheng Jiang , Asadur Chowdury , Mustafa Nasir-Moin , Akhil Kondepudi , Alexander Aabedi , Arjun Adapa , Wajd Al-Holou , Jason Heth , Oren Sagher , Pedro Lowenstein , Maria Castro , Lisa Irina Wadiura , Georg Widhalm , Volker Neuschmelting , David Reinecke , Niklas von Spreckelsen , Mitchel S Berger , Shawn L Hervey-Jumper , John G Golfinos , Matija Snuderl , Sandra Camelo-Piragua , Christian Freudiger , Honglak Lee , Daniel A Orringer

Intraoperative margin assessment with near real time pathology during partial gland ablation of prostate cancer: A feasibility study.

Urologic oncology

Avec: Miles P Mannas , Fang-Ming Deng , Adrian Ion-Margineanu , Christian Freudiger , Derek Jones , Deepthi Hoskoppal , Jonathan Melamed , James Wysock , Daniel A Orringer , Samir S Taneja

Synthetic high-density lipoprotein nanoparticles for the treatment of Niemann-Pick diseases.

BMC medicine

Avec: Mark L Schultz , Maria V Fawaz , Ruth D Azaria , Todd C Hollon , Elaine A Liu , Thaddeus J Kunkel , Troy A Halseth , Kelsey L Krus , Ran Ming , Emily E Morin , Hayley S McLoughlin , David D Bushart , Henry L Paulson , Vikram G Shakkottai , Daniel A Orringer , Anna S Schwendeman , Andrew P Lieberman

Impact of rare and multiple concurrent gene fusions on diagnostic DNA methylation classifier in brain tumors.

Molecular cancer research : MCR

Avec: Kristyn Galbraith , Jonathan Serrano , Guomiao Shen , Ivy Tran , Cheyanne C Slocum , Courtney Ketchum , Zied Abdullaev , Rust Turakulov , Tejus Bale , Marc Ladanyi , Purvil Sukhadia , Michael Zaidinski , Kerry Mullaney , Sara DiNapoli , Benjamin L Liechty , Marissa Barbaro , Jeffrey C Allen , Sharon L Gardner , Jeffrey Wisoff , David Harter , Eveline Teresa Hidalgo , John G Golfinos , Daniel A Orringer , Kenneth Aldape , Jamal Benhamida , Kazimierz O Wrzeszczynski , George Jour , Matija Snuderl

Stimulated Raman histology as a method to determine the adequacy of renal mass biopsy and identify malignant subtypes of renal cell carcinoma.

Urologic oncology

Avec: Miles P Mannas , Fang-Ming Deng , Eric C Belanger , Derek Jones , Joyce Ren , William Huang , Daniel A Orringer , Samir S Taneja

Ultra-Rapid Droplet Digital PCR Enables Intraoperative Tumor Quantification.

medRxiv : the preprint server for health sciences

Avec: Zachary R Murphy , Emilia C Bianchini , Andrew Smith , Lisa I Körner , Teresa Russell , David Reinecke , Yuxiu Wang , Matija Snuderl , Daniel A Orringer , Gilad D Evrony

Localization of protoporphyrin IX during glioma-resection surgery via paired stimulated Raman histology and fluorescence microscopy.

Nature biomedical engineering

Avec: Mustafa Nasir-Moin , Lisa Irina Wadiura , Vlad Sacalean , Devin Juros , Misha Movahed-Ezazi , Emily K Lock , Andrew Smith , Matthew Lee , Hannah Weiss , Michael Müther , Daniel Alber , Sujay Ratna , Camila Fang , Eric Suero-Molina , Sönke Hellwig , Walter Stummer , Karl Rössler , Johannes A Hainfellner , Georg Widhalm , Barbara Kiesel , David Reichert , Mario Mischkulnig , Rajan Jain , Jakob Straehle , Nicolas Neidert , Oliver Schnell , Jürgen Beck , Jay Trautman , Steve Pastore , Donato Pacione , Dimitris Placantonakis , Eric Karl Oermann , John G Golfinos , Todd C Hollon , Matija Snuderl , Christian W Freudiger , Dieter Henrik Heiland , Daniel A Orringer

Rapid, label-free detection of diffuse glioma recurrence using intraoperative stimulated Raman histology and deep neural networks.

Neuro-oncology

Avec: Todd C Hollon , Balaji Pandian , Esteban Urias , Akshay V Save , Arjun R Adapa , Sudharsan Srinivasan , Neil K Jairath , Zia Farooq , Tamara Marie , Wajd N Al-Holou , Karen Eddy , Jason A Heth , Siri Sahib S Khalsa , Kyle Conway , Oren Sagher , Jeffrey N Bruce , Peter Canoll , Christian W Freudiger , Sandra Camelo-Piragua , Honglak Lee , Daniel A Orringer

Near real-time intraoperative brain tumor diagnosis using stimulated Raman histology and deep neural networks.

Nature medicine

Avec: Todd C Hollon , Balaji Pandian , Arjun R Adapa , Esteban Urias , Akshay V Save , Siri Sahib S Khalsa , Daniel G Eichberg , Randy S D'Amico , Zia U Farooq , Spencer Lewis , Petros D Petridis , Tamara Marie , Ashish H Shah , Hugh J L Garton , Cormac O Maher , Jason A Heth , Erin L McKean , Stephen E Sullivan , Shawn L Hervey-Jumper , Parag G Patil , B Gregory Thompson , Oren Sagher , Guy M McKhann , Ricardo J Komotar , Michael E Ivan , Matija Snuderl , Marc L Otten , Timothy D Johnson , Michael B Sisti , Jeffrey N Bruce , Karin M Muraszko , Jay Trautman , Christian W Freudiger , Peter Canoll , Honglak Lee , Sandra Camelo-Piragua , Daniel A Orringer

Neuro-oncology practice

Avec: David B Altshuler , Lin Wang , Lili Zhao , Zachary Miklja , Joey Linzey , Amanda Brezzell , Sofia Kakaizada , Saritha Krishna , Daniel A Orringer , Emily M Briceño , Nicolette Gabel , Shawn L Hervey-Jumper

Unlocking glioma genetics with deep learning.

Med (New York, N.Y.)

Avec: Daniel A Orringer , Todd C Hollon

Stimulated Raman Histology Interpretation by Artificial Intelligence Provides Near-Real-Time Pathologic Feedback for Unprocessed Prostate Biopsies.

The Journal of urology

Avec: M P Mannas , F M Deng , A Ion-Margineanu , D Jones , D Hoskoppal , J Melamed , S Pastore , C Freudiger , D A Orringer , S S Taneja

Toward digital histopathological assessment in surgery for central nervous system tumors using stimulated Raman histology.

Neurosurgical focus

Avec: Lisa I Wadiura , Barbara Kiesel , Thomas Roetzer-Pejrimovsky , Mario Mischkulnig , Clemens C Vogel , Johannes A Hainfellner , Christian Matula , Christian W Freudiger , Daniel A Orringer , Adelheid Wöhrer , Karl Roessler , Georg Widhalm

102 AI-Based Molecular Classification of Diffuse Gliomas using Rapid, Label-Free Optical Imaging.

Neurosurgery

Avec: Todd Charles Hollon , John G Golfinos , Daniel A Orringer , Mitchel Berger , Shawn L Hervey-Jumper , Karin M Muraszko , Christian Freudiger , Jason Heth , Oren Sagher , Cheng Jiang , Asadur Chowdury , Mustafa Nasir Moin , Akhil Kondepudi , Alexander Arash Aabedi , Arjun R Adapa , Wajd Al-Holou , Lisa Wadiura , Georg Widhalm , Volker Neuschmelting , David Reinecke , Sandra Camelo-Piragua

T2-FLAIR mismatch sign predicts DNA methylation subclass and CDKN2A/B status in IDH-mutant astrocytomas.

Clinical cancer research : an official journal of the American Association for Cancer Research

Avec: Matthew D Lee , Rajan Jain , Kristyn Galbraith , Anna Chen , Evan Lieberman , Sohil H Patel , Dimitris G Placantonakis , David Zagzag , Marissa Barbaro , Maria Del Pilar Guillermo Prieto Eibl , John G Golfinos , Daniel A Orringer , Matija Snuderl

Fast intraoperative detection of primary CNS lymphoma and differentiation from common CNS tumors using stimulated Raman histology and deep learning.

medRxiv : the preprint server for health sciences

Avec: David Reinecke , Nader Maroouf , Andrew Smith , Daniel Alber , John Markert , Nicolas K Goff , Todd C Hollon , Asadur Chowdury , Cheng Jiang , Xinhai Hou , Anna-Katharina Meissner , Gina Fürtjes , Maximilian I Ruge , Daniel Ruess , Thomas Stehle , Abdulkader Al-Shughri , Lisa I Körner , Georg Widhalm , Thomas Roetzer-Pejrimovsky , John G Golfinos , Matija Snuderl , Volker Neuschmelting , Daniel A Orringer

Réseau de co-auteurs

Todd C Hollon 11 collaborations

John G Golfinos 8 collaborations

Matija Snuderl 8 collaborations

Christian W Freudiger 7 collaborations

Sandra Camelo-Piragua 7 collaborations

Cheng Jiang 6 collaborations

Honglak Lee 6 collaborations

Akhil Kondepudi 5 collaborations

Asadur Chowdury 5 collaborations

Georg Widhalm 5 collaborations

Balaji Pandian 4 collaborations

Siri Sahib S Khalsa 4 collaborations

Esteban Urias 4 collaborations

Oren Sagher 4 collaborations

David Reinecke 4 collaborations

Shawn L Hervey-Jumper 4 collaborations

Walter Stummer 3 collaborations

Miles P Mannas 3 collaborations

Derek Jones 3 collaborations

Fang-Ming Deng 3 collaborations

Samir S Taneja 3 collaborations

Xinhai Hou 3 collaborations

Todd Hollon 3 collaborations

Sudharsan Srinivasan 3 collaborations

Daniel Alber 3 collaborations

Jason A Heth 3 collaborations

Kristyn Galbraith 3 collaborations

Marissa Barbaro 3 collaborations

Rajan Jain 3 collaborations

Volker Neuschmelting 3 collaborations

Christian Freudiger 3 collaborations

Andrew Smith 3 collaborations

Arjun R Adapa 3 collaborations

Michael Müther 2 collaborations

Timothy D Johnson 2 collaborations

Deepthi Hoskoppal 2 collaborations

Jonathan Melamed 2 collaborations

Cordelia Orillac 2 collaborations

Kyle Conway 2 collaborations

Arjun Adapa 2 collaborations

Wajd N Al-Holou 2 collaborations

Stephen E Sullivan 2 collaborations

B Gregory Thompson 2 collaborations

Anna Chen 2 collaborations

Jonathan Serrano 2 collaborations

Donato Pacione 2 collaborations

Dimitris G Placantonakis 2 collaborations

David Zagzag 2 collaborations

Maria Del Pilar Guillermo Prieto Eibl 2 collaborations

Evan Lieberman 2 collaborations

Mustafa Nasir-Moin 2 collaborations

Wajd Al-Holou 2 collaborations

Jason Heth 2 collaborations

Lisa Irina Wadiura 2 collaborations

Lisa I Körner 2 collaborations

Johannes A Hainfellner 2 collaborations

Barbara Kiesel 2 collaborations

Mario Mischkulnig 2 collaborations

Jay Trautman 2 collaborations

Akshay V Save 2 collaborations

Tamara Marie 2 collaborations

Jeffrey N Bruce 2 collaborations

Peter Canoll 2 collaborations

Karin M Muraszko 2 collaborations

Thomas Roetzer-Pejrimovsky 2 collaborations

Mohammed Jaber 1 collaboration

Lynze R Franko 1 collaboration

Avneesh Gupta 1 collaboration

Luis E Savastano 1 collaboration

Kevin S Chen 1 collaboration

James Riddell 1 collaboration

Neil Jairath 1 collaboration

Julianne Szczepanski 1 collaboration

Peter Ouillette 1 collaboration

Katherine G Holste 1 collaboration

Abhishek Bhattacharya 1 collaboration

Joseph R Linzey 1 collaboration

Rushikesh S Joshi 1 collaboration

Sung Jik Cha 1 collaboration

Donato R Pacione 1 collaboration

Mekka Garcia 1 collaboration

Siyu Wei 1 collaboration

Chanel Schroff 1 collaboration

Christopher M William 1 collaboration

Arline Faustin 1 collaboration

Mitsuaki Shirahata 1 collaboration

David Reuss 1 collaboration

Quynh T Tran 1 collaboration

Zahangir Alom 1 collaboration

Andreas von Deimling 1 collaboration

Brent A Orr 1 collaboration

Erik P Sulman 1 collaboration

Yang Feng 1 collaboration

Alexander Aabedi 1 collaboration

Pedro Lowenstein 1 collaboration

Maria Castro 1 collaboration

Niklas von Spreckelsen 1 collaboration

Mitchel S Berger 1 collaboration

Adrian Ion-Margineanu 1 collaboration

James Wysock 1 collaboration

Mark L Schultz 1 collaboration

Maria V Fawaz 1 collaboration

Ruth D Azaria 1 collaboration

Elaine A Liu 1 collaboration

Thaddeus J Kunkel 1 collaboration

Troy A Halseth 1 collaboration

Kelsey L Krus 1 collaboration

Ran Ming 1 collaboration

Emily E Morin 1 collaboration

Hayley S McLoughlin 1 collaboration

David D Bushart 1 collaboration

Henry L Paulson 1 collaboration

Vikram G Shakkottai 1 collaboration

Anna S Schwendeman 1 collaboration

Andrew P Lieberman 1 collaboration

Guomiao Shen 1 collaboration

Ivy Tran 1 collaboration

Cheyanne C Slocum 1 collaboration

Courtney Ketchum 1 collaboration

Zied Abdullaev 1 collaboration

Rust Turakulov 1 collaboration

Tejus Bale 1 collaboration

Marc Ladanyi 1 collaboration

Purvil Sukhadia 1 collaboration

Michael Zaidinski 1 collaboration

Kerry Mullaney 1 collaboration

Sara DiNapoli 1 collaboration

Benjamin L Liechty 1 collaboration

Jeffrey C Allen 1 collaboration

Sharon L Gardner 1 collaboration

Jeffrey Wisoff 1 collaboration

David Harter 1 collaboration

Eveline Teresa Hidalgo 1 collaboration

Kenneth Aldape 1 collaboration

Jamal Benhamida 1 collaboration

Kazimierz O Wrzeszczynski 1 collaboration

George Jour 1 collaboration

Eric C Belanger 1 collaboration

Joyce Ren 1 collaboration

William Huang 1 collaboration

Zachary R Murphy 1 collaboration

Emilia C Bianchini 1 collaboration

Teresa Russell 1 collaboration

Yuxiu Wang 1 collaboration

Gilad D Evrony 1 collaboration

Vlad Sacalean 1 collaboration

Devin Juros 1 collaboration

Misha Movahed-Ezazi 1 collaboration

Emily K Lock 1 collaboration

Matthew Lee 1 collaboration

Hannah Weiss 1 collaboration

Sujay Ratna 1 collaboration

Camila Fang 1 collaboration

Eric Suero-Molina 1 collaboration

Sönke Hellwig 1 collaboration

Karl Rössler 1 collaboration

David Reichert 1 collaboration

Jakob Straehle 1 collaboration

Nicolas Neidert 1 collaboration

Oliver Schnell 1 collaboration

Jürgen Beck 1 collaboration

Steve Pastore 1 collaboration

Dimitris Placantonakis 1 collaboration

Eric Karl Oermann 1 collaboration

Dieter Henrik Heiland 1 collaboration

Neil K Jairath 1 collaboration

Zia Farooq 1 collaboration

Karen Eddy 1 collaboration

Daniel G Eichberg 1 collaboration

Randy S D'Amico 1 collaboration

Zia U Farooq 1 collaboration

Spencer Lewis 1 collaboration

Petros D Petridis 1 collaboration

Ashish H Shah 1 collaboration

Hugh J L Garton 1 collaboration

Cormac O Maher 1 collaboration

Erin L McKean 1 collaboration

Parag G Patil 1 collaboration

Guy M McKhann 1 collaboration

Ricardo J Komotar 1 collaboration

Michael E Ivan 1 collaboration

Marc L Otten 1 collaboration

Michael B Sisti 1 collaboration

David B Altshuler 1 collaboration

Lin Wang 1 collaboration

Lili Zhao 1 collaboration

Zachary Miklja 1 collaboration

Joey Linzey 1 collaboration

Amanda Brezzell 1 collaboration

Sofia Kakaizada 1 collaboration

Saritha Krishna 1 collaboration

Emily M Briceño 1 collaboration

Nicolette Gabel 1 collaboration

M P Mannas 1 collaboration

F M Deng 1 collaboration

A Ion-Margineanu 1 collaboration

D Jones 1 collaboration

D Hoskoppal 1 collaboration

J Melamed 1 collaboration

S Pastore 1 collaboration

C Freudiger 1 collaboration

D A Orringer 1 collaboration

S S Taneja 1 collaboration

Lisa I Wadiura 1 collaboration

Clemens C Vogel 1 collaboration

Christian Matula 1 collaboration

Adelheid Wöhrer 1 collaboration

Karl Roessler 1 collaboration

Todd Charles Hollon 1 collaboration

Mitchel Berger 1 collaboration

Mustafa Nasir Moin 1 collaboration

Alexander Arash Aabedi 1 collaboration

Lisa Wadiura 1 collaboration

Matthew D Lee 1 collaboration

Sohil H Patel 1 collaboration

Nader Maroouf 1 collaboration

John Markert 1 collaboration

Nicolas K Goff 1 collaboration

Anna-Katharina Meissner 1 collaboration

Gina Fürtjes 1 collaboration

Maximilian I Ruge 1 collaboration

Daniel Ruess 1 collaboration

Thomas Stehle 1 collaboration

Abdulkader Al-Shughri 1 collaboration