Dmitry Rychkov

Affiliations

Department of Pediatrics, University of California, San Francisco.

Publications (12)

Gene Expression Meta-Analysis Reveals Concordance in Gene Activation, Pathway, and Cell-Type Enrichment in Dermatomyositis Target Tissues.

ACR open rheumatology

Avec: Jessica Neely , Dmitry Rychkov , Manish Paranjpe , Michael Waterfield , Susan Kim , Marina Sirota

Molecular Diversity of Clinically Stable Human Kidney Allografts.

JAMA network open

Avec: Dmitry Rychkov , Swastika Sur , Marina Sirota , Minnie M Sarwal

Single-cell RNA-seq analysis reveals cell subsets and gene signatures associated with Rheumatoid Arthritis Disease Activity.

JCI insight

Avec: Marie Binvignat , Brenda Y Miao , Camilla Wibrand , Monica M Yang , Dmitry Rychkov , Emily Flynn , Joanne Nititham , Whitney Tamaki , Umair Khan , Alexander Carvidi , Melissa Krueger , Erene C Niemi , Yang Sun , Gabriela K Fragiadakis , Jérémie Sellam , Encarnita Mariotti-Ferrandiz , David Klatzmann , Andrew J Gross , Chun Jimmie Ye , Atul J Butte , Lindsey A Criswell , Mary C Nakamura , Marina Sirota

Single-Cell RNA Sequencing of Tocilizumab-Treated Peripheral Blood Mononuclear Cells as an

Frontiers in genetics

Avec: Arya Zarinsefat , George Hartoularos , Dmitry Rychkov , Priyanka Rashmi , Sindhu Chandran , Flavio Vincenti , Chun J Yee , Minnie M Sarwal

The Immune Signatures data resource, a compendium of systems vaccinology datasets.

Scientific data

Avec: Joann Diray-Arce , Helen E R Miller , Evan Henrich , Bram Gerritsen , Matthew P Mulè , Slim Fourati , Jeremy Gygi , Thomas Hagan , Lewis Tomalin , Dmitry Rychkov , Dmitri Kazmin , Daniel G Chawla , Hailong Meng , Patrick Dunn , John Campbell , Auteur inconnu , Minnie Sarwal , John S Tsang , Ofer Levy , Bali Pulendran , Rafick Sekaly , Aris Floratos , Raphael Gottardo , Steven H Kleinstein , Mayte Suárez-Fariñas

Perturbations in podocyte transcriptome and biological pathways induced by FSGS associated circulating factors.

Annals of translational medicine

Avec: Priyanka Rashmi , Tara K Sigdel , Dmitry Rychkov , Izabella Damm , Andrea Alice Da Silva , Flavio Vincenti , Andre L Lourenco , Charles S Craik , Jochen Reiser , Minnie M Sarwal

Cross-Tissue Transcriptomic Analysis Leveraging Machine Learning Approaches Identifies New Biomarkers for Rheumatoid Arthritis.

Frontiers in immunology

Avec: Dmitry Rychkov , Jessica Neely , Tomiko Oskotsky , Steven Yu , Noah Perlmutter , Joanne Nititham , Alexander Carvidi , Melissa Krueger , Andrew Gross , Lindsey A Criswell , Judith F Ashouri , Marina Sirota

Physical Activity Associates With Lower Systemic Inflammatory Gene Expression in Rheumatoid Arthritis.

The Journal of rheumatology

Avec: Sarah L Patterson , Shenghuan Sun , Dmitry Rychkov , Patricia Katz , Alexandra Tsitsiklis , Mary C Nakamura , Paula Hayakawa Serpa , Charles R Langelier , Marina Sirota

Pan-vaccine analysis reveals innate immune endotypes predictive of antibody responses to vaccination.

Nature immunology

Avec: Slim Fourati , Lewis E Tomalin , Matthew P Mulè , Daniel G Chawla , Bram Gerritsen , Dmitry Rychkov , Evan Henrich , Helen E R Miller , Thomas Hagan , Joann Diray-Arce , Patrick Dunn , Auteur inconnu , Ofer Levy , Raphael Gottardo , Minnie M Sarwal , John S Tsang , Mayte Suárez-Fariñas , Bali Pulendran , Steven H Kleinstein , Rafick-Pierre Sékaly

Reporters of TCR signaling identify arthritogenic T cells in murine and human autoimmune arthritis.

Proceedings of the National Academy of Sciences of the United States of America

Avec: Judith F Ashouri , Lih-Yun Hsu , Steven Yu , Dmitry Rychkov , Yiling Chen , Debra A Cheng , Marina Sirota , Erik Hansen , Lisa Lattanza , Julie Zikherman , Arthur Weiss

Mechanical Amorphization of Chitosan with Different Molecular Weights.

Polymers

Avec: Ekaterina Podgorbunskikh , Timofei Kuskov , Denis Rychkov , Oleg Lomovskii , Aleksey Bychkov

Transcriptional atlas of the human immune response to 13 vaccines reveals a common predictor of vaccine-induced antibody responses.

Nature immunology

Avec: Thomas Hagan , Bram Gerritsen , Lewis E Tomalin , Slim Fourati , Matthew P Mulè , Daniel G Chawla , Dmitri Rychkov , Evan Henrich , Helen E R Miller , Joann Diray-Arce , Patrick Dunn , Audrey Lee , Auteur inconnu , Ofer Levy , Raphael Gottardo , Minne M Sarwal , John S Tsang , Mayte Suárez-Fariñas , Rafick-Pierre Sékaly , Steven H Kleinstein , Bali Pulendran

Réseau de co-auteurs

Marina Sirota 6 collaborations

Minnie M Sarwal 4 collaborations

Joann Diray-Arce 3 collaborations

Helen E R Miller 3 collaborations

Evan Henrich 3 collaborations

Bram Gerritsen 3 collaborations

Matthew P Mulè 3 collaborations

Slim Fourati 3 collaborations

Thomas Hagan 3 collaborations

Daniel G Chawla 3 collaborations

Patrick Dunn 3 collaborations

None None 3 collaborations

John S Tsang 3 collaborations

Ofer Levy 3 collaborations

Bali Pulendran 3 collaborations

Raphael Gottardo 3 collaborations

Steven H Kleinstein 3 collaborations

Mayte Suárez-Fariñas 3 collaborations

Jessica Neely 2 collaborations

Joanne Nititham 2 collaborations

Alexander Carvidi 2 collaborations

Melissa Krueger 2 collaborations

Lindsey A Criswell 2 collaborations

Mary C Nakamura 2 collaborations

Priyanka Rashmi 2 collaborations

Flavio Vincenti 2 collaborations

Steven Yu 2 collaborations

Judith F Ashouri 2 collaborations

Lewis E Tomalin 2 collaborations

Rafick-Pierre Sékaly 2 collaborations

Manish Paranjpe 1 collaboration

Michael Waterfield 1 collaboration

Susan Kim 1 collaboration

Swastika Sur 1 collaboration

Marie Binvignat 1 collaboration

Brenda Y Miao 1 collaboration

Camilla Wibrand 1 collaboration

Monica M Yang 1 collaboration

Emily Flynn 1 collaboration

Whitney Tamaki 1 collaboration

Umair Khan 1 collaboration

Erene C Niemi 1 collaboration

Yang Sun 1 collaboration

Gabriela K Fragiadakis 1 collaboration

Jérémie Sellam 1 collaboration

Encarnita Mariotti-Ferrandiz 1 collaboration

David Klatzmann 1 collaboration

Andrew J Gross 1 collaboration

Chun Jimmie Ye 1 collaboration

Atul J Butte 1 collaboration

Arya Zarinsefat 1 collaboration

George Hartoularos 1 collaboration

Sindhu Chandran 1 collaboration

Chun J Yee 1 collaboration

Jeremy Gygi 1 collaboration

Lewis Tomalin 1 collaboration

Dmitri Kazmin 1 collaboration

Hailong Meng 1 collaboration

John Campbell 1 collaboration

Minnie Sarwal 1 collaboration

Rafick Sekaly 1 collaboration

Aris Floratos 1 collaboration

Tara K Sigdel 1 collaboration

Izabella Damm 1 collaboration

Andrea Alice Da Silva 1 collaboration

Andre L Lourenco 1 collaboration

Charles S Craik 1 collaboration

Jochen Reiser 1 collaboration

Tomiko Oskotsky 1 collaboration

Noah Perlmutter 1 collaboration

Andrew Gross 1 collaboration

Sarah L Patterson 1 collaboration

Shenghuan Sun 1 collaboration

Patricia Katz 1 collaboration

Alexandra Tsitsiklis 1 collaboration

Paula Hayakawa Serpa 1 collaboration

Charles R Langelier 1 collaboration

Lih-Yun Hsu 1 collaboration

Yiling Chen 1 collaboration

Debra A Cheng 1 collaboration

Erik Hansen 1 collaboration

Lisa Lattanza 1 collaboration

Julie Zikherman 1 collaboration

Arthur Weiss 1 collaboration

Ekaterina Podgorbunskikh 1 collaboration

Timofei Kuskov 1 collaboration

Denis Rychkov 1 collaboration

Oleg Lomovskii 1 collaboration

Aleksey Bychkov 1 collaboration

Dmitri Rychkov 1 collaboration

Audrey Lee 1 collaboration

Minne M Sarwal 1 collaboration