Floris Imhann

Affiliations

Department of Gastroenterology and Hepatology, University of Groningen and University Medical Center Groningen, Groningen, the Netherlands.

Publications (16)

Genetic effects on the commensal microbiota in inflammatory bowel disease patients.

PLoS genetics

Avec: Hugues Aschard , Vincent Laville , Eric Tchetgen Tchetgen , Dan Knights , Floris Imhann , Philippe Seksik , Noah Zaitlen , Mark S Silverberg , Jacques Cosnes , Rinse K Weersma , Ramnik Xavier , Laurent Beaugerie , David Skurnik , Harry Sokol

Impact of commonly used drugs on the composition and metabolic function of the gut microbiota.

Nature communications

Avec: Arnau Vich Vila , Valerie Collij , Serena Sanna , Trishla Sinha , Floris Imhann , Arno R Bourgonje , Zlatan Mujagic , Daisy M A E Jonkers , Ad A M Masclee , Jingyuan Fu , Alexander Kurilshikov , Cisca Wijmenga , Alexandra Zhernakova , Rinse K Weersma

Habitual dietary intake of IBD patients differs from population controls: a case-control study.

European journal of nutrition

Avec: Vera Peters , Ettje F Tigchelaar-Feenstra , Floris Imhann , Jackie A M Dekens , Morris A Swertz , Lude H Franke , Cisca Wijmenga , Rinse K Weersma , Behrooz Z Alizadeh , Gerard Dijkstra , Marjo J E Campmans-Kuijpers

Long-term dietary patterns are associated with pro-inflammatory and anti-inflammatory features of the gut microbiome.

Gut

Avec: Laura A Bolte , Arnau Vich Vila , Floris Imhann , Valerie Collij , Ranko Gacesa , Vera Peters , Cisca Wijmenga , Alexander Kurilshikov , Marjo J E Campmans-Kuijpers , Jingyuan Fu , Gerard Dijkstra , Alexandra Zhernakova , Rinse K Weersma

MLH1 Promotor Hypermethylation in Colorectal and Endometrial Carcinomas from Patients with Lynch Syndrome.

The Journal of molecular diagnostics : JMD

Avec: Noah C Helderman , Katarina D Andini , Monique E van Leerdam , Liselotte P van Hest , Daniël R Hoekman , Aysel Ahadova , Sanne W Bajwa-Ten Broeke , Tjalling Bosse , Elise M J van der Logt , Floris Imhann , Matthias Kloor , Alexandra M J Langers , Vincent T H B M Smit , Diantha Terlouw , Tom van Wezel , Hans Morreau , Maartje Nielsen

Whole exome sequencing analyses reveal gene-microbiota interactions in the context of IBD.

Gut

Avec: Shixian Hu , Arnau Vich Vila , Ranko Gacesa , Valerie Collij , Christine Stevens , Jack M Fu , Isaac Wong , Michael E Talkowski , Manuel A Rivas , Floris Imhann , Laura Bolte , Hendrik van Dullemen , Gerard Dijkstra , Marijn C Visschedijk , Eleonora A Festen , Ramnik J Xavier , Jingyuan Fu , Mark J Daly , Cisca Wijmenga , Alexandra Zhernakova , Alexander Kurilshikov , Rinse K Weersma

The 1000IBD project: multi-omics data of 1000 inflammatory bowel disease patients; data release 1.

BMC gastroenterology

Avec: Floris Imhann , K J Van der Velde , R Barbieri , R Alberts , M D Voskuil , A Vich Vila , V Collij , L M Spekhorst , K W J Van der Sloot , V Peters , H M Van Dullemen , M C Visschedijk , E A M Festen , M A Swertz , G Dijkstra , R K Weersma

Patient attitudes towards faecal sampling for gut microbiome studies and clinical care reveal positive engagement and room for improvement.

PloS one

Avec: Laura A Bolte , Marjolein A Y Klaassen , Valerie Collij , Arnau Vich Vila , Jingyuan Fu , Taco A van der Meulen , Jacco J de Haan , Gerbrig J Versteegen , Aafje Dotinga , Alexandra Zhernakova , Cisca Wijmenga , Rinse K Weersma , Floris Imhann

Anti-inflammatory Gut Microbial Pathways Are Decreased During Crohn's Disease Exacerbations.

Journal of Crohn's & colitis

Avec: Marjolein A Y Klaassen , Floris Imhann , Valerie Collij , Jingyuan Fu , Cisca Wijmenga , Alexandra Zhernakova , Gerard Dijkstra , Eleonora A M Festen , Ranko Gacesa , Arnau Vich Vila , Rinse K Weersma

Author Correction: Gut microbiome structure and metabolic activity in inflammatory bowel disease.

Nature microbiology

Avec: Eric A Franzosa , Alexandra Sirota-Madi , Julian Avila-Pacheco , Nadine Fornelos , Henry J Haiser , Stefan Reinker , Tommi Vatanen , A Brantley Hall , Himel Mallick , Lauren J McIver , Jenny S Sauk , Robin G Wilson , Betsy W Stevens , Justin M Scott , Kerry Pierce , Amy A Deik , Kevin Bullock , Floris Imhann , Jeffrey A Porter , Alexandra Zhernakova , Jingyuan Fu , Rinse K Weersma , Cisca Wijmenga , Clary B Clish , Hera Vlamakis , Curtis Huttenhower , Ramnik J Xavier

Correction to: The 1000IBD project: multi-omics data of 1000 inflammatory bowel disease patients; data release 1.

BMC gastroenterology

Avec: Floris Imhann , K J Van der Velde , R Barbieri , R Alberts , M D Voskuil , A Vich Vila , V Collij , L M Spekhorst , K W J Van der Sloot , V Peters , H M Van Dullemen , M C Visschedijk , E A M Festen , M A Swertz , G Dijkstra , R K Weersma

Gut microbiome structure and metabolic activity in inflammatory bowel disease.

Nature microbiology

Avec: Eric A Franzosa , Alexandra Sirota-Madi , Julian Avila-Pacheco , Nadine Fornelos , Henry J Haiser , Stefan Reinker , Tommi Vatanen , A Brantley Hall , Himel Mallick , Lauren J McIver , Jenny S Sauk , Robin G Wilson , Betsy W Stevens , Justin M Scott , Kerry Pierce , Amy A Deik , Kevin Bullock , Floris Imhann , Jeffrey A Porter , Alexandra Zhernakova , Jingyuan Fu , Rinse K Weersma , Cisca Wijmenga , Clary B Clish , Hera Vlamakis , Curtis Huttenhower , Ramnik J Xavier

MOLGENIS research: advanced bioinformatics data software for non-bioinformaticians.

Bioinformatics (Oxford, England)

Avec: K Joeri van der Velde , Floris Imhann , Bart Charbon , Chao Pang , David van Enckevort , Mariska Slofstra , Ruggero Barbieri , Rudi Alberts , Dennis Hendriksen , Fleur Kelpin , Mark de Haan , Tommy de Boer , Sido Haakma , Connor Stroomberg , Salome Scholtens , Gert-Jan van de Geijn , Eleonora A M Festen , Rinse K Weersma , Morris A Swertz

SLC39A8 missense variant is associated with Crohn's disease but does not have a major impact on gut microbiome composition in healthy subjects.

PloS one

Avec: Valerie Collij , Floris Imhann , Arnau Vich Vila , Jingyuan Fu , Gerard Dijkstra , Eleonora A M Festen , Michiel D Voskuil , Mark J Daly , Ramnik J Xavier , Cisca Wijmenga , Alexandra Zhernakova , Rinse K Weersma

Analysis of 1135 gut metagenomes identifies sex-specific resistome profiles.

Gut microbes

Avec: Trishla Sinha , Arnau Vich Vila , Sanzhima Garmaeva , Soesma A Jankipersadsing , Floris Imhann , Valerie Collij , Marc Jan Bonder , Xiaofang Jiang , Thomas Gurry , Eric J Alm , Mauro D'Amato , Rinse K Weersma , Sicco Scherjon , Cisca Wijmenga , Jingyuan Fu , Alexander Kurilshikov , Alexandra Zhernakova

A combination of fecal calprotectin and human beta-defensin 2 facilitates diagnosis and monitoring of inflammatory bowel disease.

Gut microbes

Avec: R Gacesa , A Vich Vila , V Collij , Z Mujagic , A Kurilshikov , M D Voskuil , E A M Festen , C Wijmenga , D M A E Jonkers , G Dijkstra , J Fu , A Zhernakova , F Imhann , R K Weersma

Réseau de co-auteurs

Rinse K Weersma 12 collaborations

Cisca Wijmenga 10 collaborations

Jingyuan Fu 9 collaborations

Alexandra Zhernakova 9 collaborations

Arnau Vich Vila 7 collaborations

Valerie Collij 7 collaborations

Gerard Dijkstra 5 collaborations

Alexander Kurilshikov 4 collaborations

Ramnik J Xavier 4 collaborations

Ranko Gacesa 3 collaborations

M D Voskuil 3 collaborations

A Vich Vila 3 collaborations

V Collij 3 collaborations

E A M Festen 3 collaborations

G Dijkstra 3 collaborations

R K Weersma 3 collaborations

Eleonora A M Festen 3 collaborations

Trishla Sinha 2 collaborations

Vera Peters 2 collaborations

Morris A Swertz 2 collaborations

Marjo J E Campmans-Kuijpers 2 collaborations

Laura A Bolte 2 collaborations

Mark J Daly 2 collaborations

K J Van der Velde 2 collaborations

R Barbieri 2 collaborations

R Alberts 2 collaborations

L M Spekhorst 2 collaborations

K W J Van der Sloot 2 collaborations

V Peters 2 collaborations

H M Van Dullemen 2 collaborations

M C Visschedijk 2 collaborations

M A Swertz 2 collaborations

Marjolein A Y Klaassen 2 collaborations

Eric A Franzosa 2 collaborations

Alexandra Sirota-Madi 2 collaborations

Julian Avila-Pacheco 2 collaborations

Nadine Fornelos 2 collaborations

Henry J Haiser 2 collaborations

Stefan Reinker 2 collaborations

Tommi Vatanen 2 collaborations

A Brantley Hall 2 collaborations

Himel Mallick 2 collaborations

Lauren J McIver 2 collaborations

Jenny S Sauk 2 collaborations

Robin G Wilson 2 collaborations

Betsy W Stevens 2 collaborations

Justin M Scott 2 collaborations

Kerry Pierce 2 collaborations

Amy A Deik 2 collaborations

Kevin Bullock 2 collaborations

Jeffrey A Porter 2 collaborations

Clary B Clish 2 collaborations

Hera Vlamakis 2 collaborations

Curtis Huttenhower 2 collaborations

Hugues Aschard 1 collaboration

Vincent Laville 1 collaboration

Eric Tchetgen Tchetgen 1 collaboration

Dan Knights 1 collaboration

Philippe Seksik 1 collaboration

Noah Zaitlen 1 collaboration

Mark S Silverberg 1 collaboration

Jacques Cosnes 1 collaboration

Ramnik Xavier 1 collaboration

Laurent Beaugerie 1 collaboration

David Skurnik 1 collaboration

Harry Sokol 1 collaboration

Serena Sanna 1 collaboration

Arno R Bourgonje 1 collaboration

Zlatan Mujagic 1 collaboration

Daisy M A E Jonkers 1 collaboration

Ad A M Masclee 1 collaboration

Ettje F Tigchelaar-Feenstra 1 collaboration

Jackie A M Dekens 1 collaboration

Lude H Franke 1 collaboration

Behrooz Z Alizadeh 1 collaboration

Noah C Helderman 1 collaboration

Katarina D Andini 1 collaboration

Monique E van Leerdam 1 collaboration

Liselotte P van Hest 1 collaboration

Daniël R Hoekman 1 collaboration

Aysel Ahadova 1 collaboration

Sanne W Bajwa-Ten Broeke 1 collaboration

Tjalling Bosse 1 collaboration

Elise M J van der Logt 1 collaboration

Matthias Kloor 1 collaboration

Alexandra M J Langers 1 collaboration

Vincent T H B M Smit 1 collaboration

Diantha Terlouw 1 collaboration

Tom van Wezel 1 collaboration

Hans Morreau 1 collaboration

Maartje Nielsen 1 collaboration

Shixian Hu 1 collaboration

Christine Stevens 1 collaboration

Jack M Fu 1 collaboration

Isaac Wong 1 collaboration

Michael E Talkowski 1 collaboration

Manuel A Rivas 1 collaboration

Laura Bolte 1 collaboration

Hendrik van Dullemen 1 collaboration

Marijn C Visschedijk 1 collaboration

Eleonora A Festen 1 collaboration

Taco A van der Meulen 1 collaboration

Jacco J de Haan 1 collaboration

Gerbrig J Versteegen 1 collaboration

Aafje Dotinga 1 collaboration

K Joeri van der Velde 1 collaboration

Bart Charbon 1 collaboration

Chao Pang 1 collaboration

David van Enckevort 1 collaboration

Mariska Slofstra 1 collaboration

Ruggero Barbieri 1 collaboration

Rudi Alberts 1 collaboration

Dennis Hendriksen 1 collaboration

Fleur Kelpin 1 collaboration

Mark de Haan 1 collaboration

Tommy de Boer 1 collaboration

Sido Haakma 1 collaboration

Connor Stroomberg 1 collaboration

Salome Scholtens 1 collaboration

Gert-Jan van de Geijn 1 collaboration

Michiel D Voskuil 1 collaboration

Sanzhima Garmaeva 1 collaboration

Soesma A Jankipersadsing 1 collaboration

Marc Jan Bonder 1 collaboration

Xiaofang Jiang 1 collaboration

Thomas Gurry 1 collaboration

Eric J Alm 1 collaboration

Mauro D'Amato 1 collaboration

Sicco Scherjon 1 collaboration

R Gacesa 1 collaboration

Z Mujagic 1 collaboration

A Kurilshikov 1 collaboration

C Wijmenga 1 collaboration

D M A E Jonkers 1 collaboration

J Fu 1 collaboration

A Zhernakova 1 collaboration

F Imhann 1 collaboration