V Collij

Affiliations

Department of Gastroenterology and Hepatology, University of Groningen and University Medical Center Groningen, PO Box 30.001, 9700RB, Groningen, the Netherlands.
Department of Genetics, University of Groningen and University Medical Center Groningen, Groningen, the Netherlands.

Publications (20)

The Composition and Metabolic Potential of the Human Small Intestinal Microbiota Within the Context of Inflammatory Bowel Disease.

Journal of Crohn's & colitis

Avec: Renate A A A Ruigrok , Valerie Collij , Paula Sureda , Marjolein A Y Klaassen , Laura A Bolte , Bernadien H Jansen , Michiel D Voskuil , Jingyuan Fu , Cisca Wijmenga , Alexandra Zhernakova , Rinse K Weersma , Arnau Vich Vila

Impact of commonly used drugs on the composition and metabolic function of the gut microbiota.

Nature communications

Avec: Arnau Vich Vila , Valerie Collij , Serena Sanna , Trishla Sinha , Floris Imhann , Arno R Bourgonje , Zlatan Mujagic , Daisy M A E Jonkers , Ad A M Masclee , Jingyuan Fu , Alexander Kurilshikov , Cisca Wijmenga , Alexandra Zhernakova , Rinse K Weersma

Exploring the Predictive Value of Gut Microbiome Signatures for Therapy Intensification in Patients With Inflammatory Bowel Disease: A 10-Year Follow-up Study.

Inflammatory bowel diseases

Avec: Zainab M A Al Radi , Femke M Prins , Valerie Collij , Arnau Vich Vila , Eleonora A M Festen , Gerard Dijkstra , Rinse K Weersma , Marjolein A Y Klaassen , Ranko Gacesa

Gut microbiome dysbiosis is associated with increased mortality after solid organ transplantation.

Science translational medicine

Avec: J Casper Swarte , Yanni Li , Shixian Hu , Johannes R Björk , Ranko Gacesa , Arnau Vich Vila , Rianne M Douwes , Valerie Collij , Alexander Kurilshikov , Adrian Post , Marjolein A Y Klaassen , Michele F Eisenga , António W Gomes-Neto , Daan Kremer , Bernadien H Jansen , Tim J Knobbe , Stefan P Berger , Jan-Stephan F Sanders , M Rebecca Heiner-Fokkema , Robert J Porte , Frans J C Cuperus , Vincent E de Meijer , Cisca Wijmenga , Eleonora A M Festen , Alexandra Zhernakova , Jingyuan Fu , Hermie J M Harmsen , Hans Blokzijl , Stephan J L Bakker , Rinse K Weersma

Faecal metabolome and its determinants in inflammatory bowel disease.

Gut

Avec: Arnau Vich Vila , Shixian Hu , Sergio Andreu-Sánchez , Valerie Collij , Bernadien H Jansen , Hannah E Augustijn , Laura A Bolte , Renate A A A Ruigrok , Galeb Abu-Ali , Cosmas Giallourakis , Jessica Schneider , John Parkinson , Amal Al-Garawi , Alexandra Zhernakova , Ranko Gacesa , Jingyuan Fu , Rinse K Weersma

Whole exome sequencing analyses reveal gene-microbiota interactions in the context of IBD.

Gut

Avec: Shixian Hu , Arnau Vich Vila , Ranko Gacesa , Valerie Collij , Christine Stevens , Jack M Fu , Isaac Wong , Michael E Talkowski , Manuel A Rivas , Floris Imhann , Laura Bolte , Hendrik van Dullemen , Gerard Dijkstra , Marijn C Visschedijk , Eleonora A Festen , Ramnik J Xavier , Jingyuan Fu , Mark J Daly , Cisca Wijmenga , Alexandra Zhernakova , Alexander Kurilshikov , Rinse K Weersma

Gut microbiota in inflammatory bowel diseases: moving from basic science to clinical applications.

Human genetics

Avec: Valerie Collij , Marjolein A Y Klaassen , Rinse K Weersma , Arnau Vich Vila

The 1000IBD project: multi-omics data of 1000 inflammatory bowel disease patients; data release 1.

BMC gastroenterology

Avec: Floris Imhann , K J Van der Velde , R Barbieri , R Alberts , M D Voskuil , A Vich Vila , V Collij , L M Spekhorst , K W J Van der Sloot , V Peters , H M Van Dullemen , M C Visschedijk , E A M Festen , M A Swertz , G Dijkstra , R K Weersma

Patient attitudes towards faecal sampling for gut microbiome studies and clinical care reveal positive engagement and room for improvement.

PloS one

Avec: Laura A Bolte , Marjolein A Y Klaassen , Valerie Collij , Arnau Vich Vila , Jingyuan Fu , Taco A van der Meulen , Jacco J de Haan , Gerbrig J Versteegen , Aafje Dotinga , Alexandra Zhernakova , Cisca Wijmenga , Rinse K Weersma , Floris Imhann

The gut microbiome across the cardiovascular risk spectrum.

European journal of preventive cardiology

Avec: Femke M Prins , Valerie Collij , Hilde E Groot , Johannes R Björk , J Casper Swarte , Sergio Andreu-Sánchez , Bernadien H Jansen , Jingyuan Fu , Hermie J M Harmsen , Alexandra Zhernakova , Erik Lipsic , Pim van der Harst , Rinse K Weersma , Ranko Gacesa

Gut feelings: the relations between depression, anxiety, psychotropic drugs and the gut microbiome.

Gut microbes

Avec: S Brushett , R Gacesa , A Vich Vila , M F Brandao Gois , S Andreu-Sánchez , J C Swarte , M A Y Klaassen , V Collij , T Sinha , L A Bolte , J Wu , M Swertz , M L A de Kroon , S A Reijneveld , C Wijmenga , R K Weersma , J Fu , H M van Loo , A Kurilshikov , A Zhernakova

Gut microbial co-abundance networks show specificity in inflammatory bowel disease and obesity.

Nature communications

Avec: Lianmin Chen , Valerie Collij , Martin Jaeger , Inge C L van den Munckhof , Arnau Vich Vila , Alexander Kurilshikov , Ranko Gacesa , Trishla Sinha , Marije Oosting , Leo A B Joosten , Joost H W Rutten , Niels P Riksen , Ramnik J Xavier , Folkert Kuipers , Cisca Wijmenga , Alexandra Zhernakova , Mihai G Netea , Rinse K Weersma , Jingyuan Fu

Long-term dietary patterns are associated with pro-inflammatory and anti-inflammatory features of the gut microbiome.

Gut

Avec: Laura A Bolte , Arnau Vich Vila , Floris Imhann , Valerie Collij , Ranko Gacesa , Vera Peters , Cisca Wijmenga , Alexander Kurilshikov , Marjo J E Campmans-Kuijpers , Jingyuan Fu , Gerard Dijkstra , Alexandra Zhernakova , Rinse K Weersma

Environmental factors shaping the gut microbiome in a Dutch population.

Nature

Avec: R Gacesa , A Kurilshikov , A Vich Vila , T Sinha , M A Y Klaassen , L A Bolte , S Andreu-Sánchez , L Chen , V Collij , S Hu , J A M Dekens , V C Lenters , J R Björk , J C Swarte , M A Swertz , B H Jansen , J Gelderloos-Arends , S Jankipersadsing , M Hofker , R C H Vermeulen , S Sanna , H J M Harmsen , C Wijmenga , J Fu , A Zhernakova , R K Weersma

Anti-inflammatory Gut Microbial Pathways Are Decreased During Crohn's Disease Exacerbations.

Journal of Crohn's & colitis

Avec: Marjolein A Y Klaassen , Floris Imhann , Valerie Collij , Jingyuan Fu , Cisca Wijmenga , Alexandra Zhernakova , Gerard Dijkstra , Eleonora A M Festen , Ranko Gacesa , Arnau Vich Vila , Rinse K Weersma

Correction to: The 1000IBD project: multi-omics data of 1000 inflammatory bowel disease patients; data release 1.

BMC gastroenterology

SLC39A8 missense variant is associated with Crohn's disease but does not have a major impact on gut microbiome composition in healthy subjects.

PloS one

Avec: Valerie Collij , Floris Imhann , Arnau Vich Vila , Jingyuan Fu , Gerard Dijkstra , Eleonora A M Festen , Michiel D Voskuil , Mark J Daly , Ramnik J Xavier , Cisca Wijmenga , Alexandra Zhernakova , Rinse K Weersma

Analysis of 1135 gut metagenomes identifies sex-specific resistome profiles.

Gut microbes

Avec: Trishla Sinha , Arnau Vich Vila , Sanzhima Garmaeva , Soesma A Jankipersadsing , Floris Imhann , Valerie Collij , Marc Jan Bonder , Xiaofang Jiang , Thomas Gurry , Eric J Alm , Mauro D'Amato , Rinse K Weersma , Sicco Scherjon , Cisca Wijmenga , Jingyuan Fu , Alexander Kurilshikov , Alexandra Zhernakova

A combination of fecal calprotectin and human beta-defensin 2 facilitates diagnosis and monitoring of inflammatory bowel disease.

Gut microbes

Avec: R Gacesa , A Vich Vila , V Collij , Z Mujagic , A Kurilshikov , M D Voskuil , E A M Festen , C Wijmenga , D M A E Jonkers , G Dijkstra , J Fu , A Zhernakova , F Imhann , R K Weersma

Effect of host genetics on the gut microbiome in 7,738 participants of the Dutch Microbiome Project.

Nature genetics

Avec: Esteban A Lopera-Maya , Alexander Kurilshikov , Adriaan van der Graaf , Shixian Hu , Sergio Andreu-Sánchez , Lianmin Chen , Arnau Vich Vila , Ranko Gacesa , Trishla Sinha , Valerie Collij , Marjiolein A Y Klaassen , Laura A Bolte , Milla F Brandao Gois , Pieter B T Neerincx , Morris A Swertz , Auteur inconnu , Hermie J M Harmsen , Cisca Wijmenga , Jingyuan Fu , Rinse K Weersma , Alexandra Zhernakova , Serena Sanna

Réseau de co-auteurs

Valerie Collij 15 collaborations

Rinse K Weersma 15 collaborations

Arnau Vich Vila 14 collaborations

Jingyuan Fu 13 collaborations

Alexandra Zhernakova 13 collaborations

Cisca Wijmenga 11 collaborations

Floris Imhann 9 collaborations

Ranko Gacesa 9 collaborations

Alexander Kurilshikov 7 collaborations

Marjolein A Y Klaassen 6 collaborations

Laura A Bolte 5 collaborations

Gerard Dijkstra 5 collaborations

A Vich Vila 5 collaborations

R K Weersma 5 collaborations

Bernadien H Jansen 4 collaborations

Trishla Sinha 4 collaborations

Eleonora A M Festen 4 collaborations

Shixian Hu 4 collaborations

Hermie J M Harmsen 3 collaborations

Sergio Andreu-Sánchez 3 collaborations

Ramnik J Xavier 3 collaborations

M D Voskuil 3 collaborations

E A M Festen 3 collaborations

M A Swertz 3 collaborations

G Dijkstra 3 collaborations

R Gacesa 3 collaborations

C Wijmenga 3 collaborations

J Fu 3 collaborations

A Kurilshikov 3 collaborations

A Zhernakova 3 collaborations

Renate A A A Ruigrok 2 collaborations

Michiel D Voskuil 2 collaborations

Serena Sanna 2 collaborations

Femke M Prins 2 collaborations

J Casper Swarte 2 collaborations

Johannes R Björk 2 collaborations

Mark J Daly 2 collaborations

K J Van der Velde 2 collaborations

R Barbieri 2 collaborations

R Alberts 2 collaborations

L M Spekhorst 2 collaborations

K W J Van der Sloot 2 collaborations

V Peters 2 collaborations

H M Van Dullemen 2 collaborations

M C Visschedijk 2 collaborations

S Andreu-Sánchez 2 collaborations

J C Swarte 2 collaborations

M A Y Klaassen 2 collaborations

T Sinha 2 collaborations

L A Bolte 2 collaborations

Lianmin Chen 2 collaborations

Paula Sureda 1 collaboration

Arno R Bourgonje 1 collaboration

Zlatan Mujagic 1 collaboration

Daisy M A E Jonkers 1 collaboration

Ad A M Masclee 1 collaboration

Zainab M A Al Radi 1 collaboration

Yanni Li 1 collaboration

Rianne M Douwes 1 collaboration

Adrian Post 1 collaboration

Michele F Eisenga 1 collaboration

António W Gomes-Neto 1 collaboration

Daan Kremer 1 collaboration

Tim J Knobbe 1 collaboration

Stefan P Berger 1 collaboration

Jan-Stephan F Sanders 1 collaboration

M Rebecca Heiner-Fokkema 1 collaboration

Robert J Porte 1 collaboration

Frans J C Cuperus 1 collaboration

Vincent E de Meijer 1 collaboration

Hans Blokzijl 1 collaboration

Stephan J L Bakker 1 collaboration

Hannah E Augustijn 1 collaboration

Galeb Abu-Ali 1 collaboration

Cosmas Giallourakis 1 collaboration

Jessica Schneider 1 collaboration

John Parkinson 1 collaboration

Amal Al-Garawi 1 collaboration

Christine Stevens 1 collaboration

Jack M Fu 1 collaboration

Isaac Wong 1 collaboration

Michael E Talkowski 1 collaboration

Manuel A Rivas 1 collaboration

Laura Bolte 1 collaboration

Hendrik van Dullemen 1 collaboration

Marijn C Visschedijk 1 collaboration

Eleonora A Festen 1 collaboration

Taco A van der Meulen 1 collaboration

Jacco J de Haan 1 collaboration

Gerbrig J Versteegen 1 collaboration

Aafje Dotinga 1 collaboration

Hilde E Groot 1 collaboration

Erik Lipsic 1 collaboration

Pim van der Harst 1 collaboration

S Brushett 1 collaboration

M F Brandao Gois 1 collaboration

J Wu 1 collaboration

M Swertz 1 collaboration

M L A de Kroon 1 collaboration

S A Reijneveld 1 collaboration

H M van Loo 1 collaboration

Martin Jaeger 1 collaboration

Inge C L van den Munckhof 1 collaboration

Marije Oosting 1 collaboration

Leo A B Joosten 1 collaboration

Joost H W Rutten 1 collaboration

Niels P Riksen 1 collaboration

Folkert Kuipers 1 collaboration

Mihai G Netea 1 collaboration

Vera Peters 1 collaboration

Marjo J E Campmans-Kuijpers 1 collaboration

L Chen 1 collaboration

S Hu 1 collaboration

J A M Dekens 1 collaboration

V C Lenters 1 collaboration

J R Björk 1 collaboration

B H Jansen 1 collaboration

J Gelderloos-Arends 1 collaboration

S Jankipersadsing 1 collaboration

M Hofker 1 collaboration

R C H Vermeulen 1 collaboration

S Sanna 1 collaboration

H J M Harmsen 1 collaboration

Sanzhima Garmaeva 1 collaboration

Soesma A Jankipersadsing 1 collaboration

Marc Jan Bonder 1 collaboration

Xiaofang Jiang 1 collaboration

Thomas Gurry 1 collaboration

Eric J Alm 1 collaboration

Mauro D'Amato 1 collaboration

Sicco Scherjon 1 collaboration

Z Mujagic 1 collaboration

D M A E Jonkers 1 collaboration

F Imhann 1 collaboration

Esteban A Lopera-Maya 1 collaboration

Adriaan van der Graaf 1 collaboration

Marjiolein A Y Klaassen 1 collaboration

Milla F Brandao Gois 1 collaboration

Pieter B T Neerincx 1 collaboration

Morris A Swertz 1 collaboration

None None 1 collaboration