Harley Pyles

Affiliations

Department of Biochemistry, University of Washington, Seattle, WA 98195.
Institute for Protein Design, University of Washington, Seattle, WA 98195.

Publications (10)

Ion-dependent protein-surface interactions from intrinsic solvent response.

Proceedings of the National Academy of Sciences of the United States of America

Avec: Jesse L Prelesnik , Robert G Alberstein , Shuai Zhang , Harley Pyles , David Baker , Jim Pfaendtner , James J De Yoreo , F Akif Tezcan , Richard C Remsing , Christopher J Mundy

Sequence-Structure-Binding Relationships Reveal Adhesion Behavior of the Car9 Solid-Binding Peptide: An Integrated Experimental and Simulation Study.

Journal of the American Chemical Society

Avec: Brittney Hellner , Sarah Alamdari , Harley Pyles , Shuai Zhang , Arushi Prakash , Kayla G Sprenger , James J De Yoreo , David Baker , Jim Pfaendtner , François Baneyx

bioRxiv : the preprint server for biology

Avec: Hanlun Jiang , Kevin M Jude , Kejia Wu , Jorge Fallas , George Ueda , T J Brunette , Derrick Hicks , Harley Pyles , Aerin Yang , Lauren Carter , Mila Lamb , Xinting Li , Paul M Levine , Lance Stewart , K Christopher Garcia , David Baker

De novo design of buttressed loops for sculpting protein functions.

Nature chemical biology

Avec: Hanlun Jiang , Kevin M Jude , Kejia Wu , Jorge Fallas , George Ueda , T J Brunette , Derrick R Hicks , Harley Pyles , Aerin Yang , Lauren Carter , Mila Lamb , Xinting Li , Paul M Levine , Lance Stewart , K Christopher Garcia , David Baker

Quantifying the Dynamics of Protein Self-Organization Using Deep Learning Analysis of Atomic Force Microscopy Data.

Nano letters

Avec: Maxim Ziatdinov , Shuai Zhang , Orion Dollar , Jim Pfaendtner , Christopher J Mundy , Xin Li , Harley Pyles , David Baker , James J De Yoreo , Sergei V Kalinin

Rotational dynamics and transition mechanisms of surface-adsorbed proteins.

Proceedings of the National Academy of Sciences of the United States of America

Avec: Shuai Zhang , Robbie Sadre , Benjamin A Legg , Harley Pyles , Talita Perciano , E Wes Bethel , David Baker , Oliver Rübel , James J De Yoreo

Formation, chemical evolution and solidification of the dense liquid phase of calcium (bi)carbonate.

Nature materials

Avec: Biao Jin , Ying Chen , Harley Pyles , Marcel D Baer , Benjamin A Legg , Zheming Wang , Nancy M Washton , Karl T Mueller , David Baker , Gregory K Schenter , Christopher J Mundy , James J De Yoreo

Disentangling Rotational Dynamics and Ordering Transitions in a System of Self-Organizing Protein Nanorods

ACS nano

Avec: Sergei V Kalinin , Shuai Zhang , Mani Valleti , Harley Pyles , David Baker , James J De Yoreo , Maxim Ziatdinov

Directing polymorph specific calcium carbonate formation with de novo protein templates.

Nature communications

Avec: Fatima A Davila-Hernandez , Biao Jin , Harley Pyles , Shuai Zhang , Zheming Wang , Timothy F Huddy , Asim K Bera , Alex Kang , Chun-Long Chen , James J De Yoreo , David Baker

Engineering Biomolecular Self-Assembly at Solid-Liquid Interfaces.

Advanced materials (Deerfield Beach, Fla.)

Avec: Shuai Zhang , Jiajun Chen , Jianli Liu , Harley Pyles , David Baker , Chun-Long Chen , James J De Yoreo

Réseau de co-auteurs

David Baker 10 collaborations

James J De Yoreo 8 collaborations

Shuai Zhang 7 collaborations

Jim Pfaendtner 3 collaborations

Christopher J Mundy 3 collaborations

Hanlun Jiang 2 collaborations

Kevin M Jude 2 collaborations

Kejia Wu 2 collaborations

Jorge Fallas 2 collaborations

George Ueda 2 collaborations

T J Brunette 2 collaborations

Aerin Yang 2 collaborations

Lauren Carter 2 collaborations

Mila Lamb 2 collaborations

Xinting Li 2 collaborations

Paul M Levine 2 collaborations

Lance Stewart 2 collaborations

K Christopher Garcia 2 collaborations

Maxim Ziatdinov 2 collaborations

Sergei V Kalinin 2 collaborations

Benjamin A Legg 2 collaborations

Biao Jin 2 collaborations

Zheming Wang 2 collaborations

Chun-Long Chen 2 collaborations

Jesse L Prelesnik 1 collaboration

Robert G Alberstein 1 collaboration

F Akif Tezcan 1 collaboration

Richard C Remsing 1 collaboration

Brittney Hellner 1 collaboration

Sarah Alamdari 1 collaboration

Arushi Prakash 1 collaboration

Kayla G Sprenger 1 collaboration

François Baneyx 1 collaboration

Derrick Hicks 1 collaboration

Derrick R Hicks 1 collaboration

Orion Dollar 1 collaboration

Xin Li 1 collaboration

Robbie Sadre 1 collaboration

Talita Perciano 1 collaboration

E Wes Bethel 1 collaboration

Oliver Rübel 1 collaboration

Ying Chen 1 collaboration

Marcel D Baer 1 collaboration

Nancy M Washton 1 collaboration

Karl T Mueller 1 collaboration

Gregory K Schenter 1 collaboration

Mani Valleti 1 collaboration

Fatima A Davila-Hernandez 1 collaboration

Timothy F Huddy 1 collaboration

Asim K Bera 1 collaboration

Alex Kang 1 collaboration

Jiajun Chen 1 collaboration

Jianli Liu 1 collaboration