Jan Funke

Affiliations

Federal Institute of Hydrology (BfG), Am Mainzer Tor 1, 56068, Koblenz, Germany.

Publications (9)

Ozonation products of zidovudine and thymidine in oxidative water treatment.

Water research X

Avec: Jan Funke , Carsten Prasse , Christian Dietrich , Thomas A Ternes

Reconstruction of motor control circuits in adult Drosophila using automated transmission electron microscopy.

Cell

Avec: Jasper S Phelps , David Grant Colburn Hildebrand , Brett J Graham , Aaron T Kuan , Logan A Thomas , Tri M Nguyen , Julia Buhmann , Anthony W Azevedo , Anne Sustar , Sweta Agrawal , Mingguan Liu , Brendan L Shanny , Jan Funke , John C Tuthill , Wei-Chung Allen Lee

Large Scale Image Segmentation with Structured Loss Based Deep Learning for Connectome Reconstruction.

IEEE transactions on pattern analysis and machine intelligence

Avec: Jan Funke , Fabian Tschopp , William Grisaitis , Arlo Sheridan , Chandan Singh , Stephan Saalfeld , Srinivas C Turaga

Dense neuronal reconstruction through X-ray holographic nano-tomography.

Nature neuroscience

Avec: Aaron T Kuan , Jasper S Phelps , Logan A Thomas , Tri M Nguyen , Julie Han , Chiao-Lin Chen , Anthony W Azevedo , John C Tuthill , Jan Funke , Peter Cloetens , Alexandra Pacureanu , Wei-Chung Allen Lee

Connectome-driven neural inventory of a complete visual system.

bioRxiv : the preprint server for biology

Avec: Aljoscha Nern , Frank Loesche , Shin-Ya Takemura , Laura E Burnett , Marisa Dreher , Eyal Gruntman , Judith Hoeller , Gary B Huang , Michal Januszewski , Nathan C Klapoetke , Sanna Koskela , Kit D Longden , Zhiyuan Lu , Stephan Preibisch , Wei Qiu , Edward M Rogers , Pavithraa Seenivasan , Arthur Zhao , John Bogovic , Brandon S Canino , Jody Clements , Michael Cook , Samantha Finley-May , Miriam A Flynn , Imran Hameed , Kenneth J Hayworth , Gary Patrick Hopkins , Philip M Hubbard , William T Katz , Julie Kovalyak , Shirley A Lauchie , Meghan Leonard , Alanna Lohff , Charli A Maldonado , Caroline Mooney , Nneoma Okeoma , Donald J Olbris , Christopher Ordish , Tyler Paterson , Emily M Phillips , Tobias Pietzsch , Jennifer Rivas Salinas , Patricia K Rivlin , Ashley L Scott , Louis A Scuderi , Satoko Takemura , Iris Talebi , Alexander Thomson , Eric T Trautman , Lowell Umayam , Claire Walsh , John J Walsh , C Shan Xu , Emily A Yakal , Tansy Yang , Ting Zhao , Jan Funke , Reed George , Harald F Hess , Gregory S X E Jefferis , Christopher Knecht , Wyatt Korff , Stephen M Plaza , Sandro Romani , Stephan Saalfeld , Louis K Scheffer , Stuart Berg , Gerald M Rubin , Michael B Reiser

Hierarchical architecture of dopaminergic circuits enables second-order conditioning in

eLife

Avec: Daichi Yamada , Daniel Bushey , Feng Li , Karen L Hibbard , Megan Sammons , Jan Funke , Ashok Litwin-Kumar , Toshihide Hige , Yoshinori Aso

Neuronal wiring diagram of an adult brain.

bioRxiv : the preprint server for biology

Avec: Sven Dorkenwald , Arie Matsliah , Amy R Sterling , Philipp Schlegel , Szi-Chieh Yu , Claire E McKellar , Albert Lin , Marta Costa , Katharina Eichler , Yijie Yin , Will Silversmith , Casey Schneider-Mizell , Chris S Jordan , Derrick Brittain , Akhilesh Halageri , Kai Kuehner , Oluwaseun Ogedengbe , Ryan Morey , Jay Gager , Krzysztof Kruk , Eric Perlman , Runzhe Yang , David Deutsch , Doug Bland , Marissa Sorek , Ran Lu , Thomas Macrina , Kisuk Lee , J Alexander Bae , Shang Mu , Barak Nehoran , Eric Mitchell , Sergiy Popovych , Jingpeng Wu , Zhen Jia , Manuel Castro , Nico Kemnitz , Dodam Ih , Alexander Shakeel Bates , Nils Eckstein , Jan Funke , Forrest Collman , Davi D Bock , Gregory S X E Jefferis , H Sebastian Seung , Mala Murthy , Auteur inconnu

Network statistics of the whole-brain connectome of Drosophila.

Nature

Avec: Albert Lin , Runzhe Yang , Sven Dorkenwald , Arie Matsliah , Amy R Sterling , Philipp Schlegel , Szi-Chieh Yu , Claire E McKellar , Marta Costa , Katharina Eichler , Alexander Shakeel Bates , Nils Eckstein , Jan Funke , Gregory S X E Jefferis , Mala Murthy

Automated reconstruction of whole-embryo cell lineages by learning from sparse annotations.

Nature biotechnology

Avec: Caroline Malin-Mayor , Peter Hirsch , Leo Guignard , Katie McDole , Yinan Wan , William C Lemon , Dagmar Kainmueller , Philipp J Keller , Stephan Preibisch , Jan Funke

Réseau de co-auteurs

Gregory S X E Jefferis 3 collaborations

Jasper S Phelps 2 collaborations

Aaron T Kuan 2 collaborations

Logan A Thomas 2 collaborations

Tri M Nguyen 2 collaborations

Anthony W Azevedo 2 collaborations

John C Tuthill 2 collaborations

Wei-Chung Allen Lee 2 collaborations

Stephan Saalfeld 2 collaborations

Stephan Preibisch 2 collaborations

Sven Dorkenwald 2 collaborations

Arie Matsliah 2 collaborations

Amy R Sterling 2 collaborations

Philipp Schlegel 2 collaborations

Szi-Chieh Yu 2 collaborations

Claire E McKellar 2 collaborations

Albert Lin 2 collaborations

Marta Costa 2 collaborations

Katharina Eichler 2 collaborations

Runzhe Yang 2 collaborations

Alexander Shakeel Bates 2 collaborations

Nils Eckstein 2 collaborations

Mala Murthy 2 collaborations

Carsten Prasse 1 collaboration

Christian Dietrich 1 collaboration

Thomas A Ternes 1 collaboration

David Grant Colburn Hildebrand 1 collaboration

Brett J Graham 1 collaboration

Julia Buhmann 1 collaboration

Anne Sustar 1 collaboration

Sweta Agrawal 1 collaboration

Mingguan Liu 1 collaboration

Brendan L Shanny 1 collaboration

Fabian Tschopp 1 collaboration

William Grisaitis 1 collaboration

Arlo Sheridan 1 collaboration

Chandan Singh 1 collaboration

Srinivas C Turaga 1 collaboration

Julie Han 1 collaboration

Chiao-Lin Chen 1 collaboration

Peter Cloetens 1 collaboration

Alexandra Pacureanu 1 collaboration

Aljoscha Nern 1 collaboration

Frank Loesche 1 collaboration

Shin-Ya Takemura 1 collaboration

Laura E Burnett 1 collaboration

Marisa Dreher 1 collaboration

Eyal Gruntman 1 collaboration

Judith Hoeller 1 collaboration

Gary B Huang 1 collaboration

Michal Januszewski 1 collaboration

Nathan C Klapoetke 1 collaboration

Sanna Koskela 1 collaboration

Kit D Longden 1 collaboration

Zhiyuan Lu 1 collaboration

Wei Qiu 1 collaboration

Edward M Rogers 1 collaboration

Pavithraa Seenivasan 1 collaboration

Arthur Zhao 1 collaboration

John Bogovic 1 collaboration

Brandon S Canino 1 collaboration

Jody Clements 1 collaboration

Michael Cook 1 collaboration

Samantha Finley-May 1 collaboration

Miriam A Flynn 1 collaboration

Imran Hameed 1 collaboration

Kenneth J Hayworth 1 collaboration

Gary Patrick Hopkins 1 collaboration

Philip M Hubbard 1 collaboration

William T Katz 1 collaboration

Julie Kovalyak 1 collaboration

Shirley A Lauchie 1 collaboration

Meghan Leonard 1 collaboration

Alanna Lohff 1 collaboration

Charli A Maldonado 1 collaboration

Caroline Mooney 1 collaboration

Nneoma Okeoma 1 collaboration

Donald J Olbris 1 collaboration

Christopher Ordish 1 collaboration

Tyler Paterson 1 collaboration

Emily M Phillips 1 collaboration

Tobias Pietzsch 1 collaboration

Jennifer Rivas Salinas 1 collaboration

Patricia K Rivlin 1 collaboration

Ashley L Scott 1 collaboration

Louis A Scuderi 1 collaboration

Satoko Takemura 1 collaboration

Iris Talebi 1 collaboration

Alexander Thomson 1 collaboration

Eric T Trautman 1 collaboration

Lowell Umayam 1 collaboration

Claire Walsh 1 collaboration

John J Walsh 1 collaboration

C Shan Xu 1 collaboration

Emily A Yakal 1 collaboration

Tansy Yang 1 collaboration

Ting Zhao 1 collaboration

Reed George 1 collaboration

Harald F Hess 1 collaboration

Christopher Knecht 1 collaboration

Wyatt Korff 1 collaboration

Stephen M Plaza 1 collaboration

Sandro Romani 1 collaboration

Louis K Scheffer 1 collaboration

Stuart Berg 1 collaboration

Gerald M Rubin 1 collaboration

Michael B Reiser 1 collaboration

Daichi Yamada 1 collaboration

Daniel Bushey 1 collaboration

Feng Li 1 collaboration

Karen L Hibbard 1 collaboration

Megan Sammons 1 collaboration

Ashok Litwin-Kumar 1 collaboration

Toshihide Hige 1 collaboration

Yoshinori Aso 1 collaboration

Yijie Yin 1 collaboration

Will Silversmith 1 collaboration

Casey Schneider-Mizell 1 collaboration

Chris S Jordan 1 collaboration

Derrick Brittain 1 collaboration

Akhilesh Halageri 1 collaboration

Kai Kuehner 1 collaboration

Oluwaseun Ogedengbe 1 collaboration

Ryan Morey 1 collaboration

Jay Gager 1 collaboration

Krzysztof Kruk 1 collaboration

Eric Perlman 1 collaboration

David Deutsch 1 collaboration

Doug Bland 1 collaboration

Marissa Sorek 1 collaboration

Ran Lu 1 collaboration

Thomas Macrina 1 collaboration

Kisuk Lee 1 collaboration

J Alexander Bae 1 collaboration

Shang Mu 1 collaboration

Barak Nehoran 1 collaboration

Eric Mitchell 1 collaboration

Sergiy Popovych 1 collaboration

Jingpeng Wu 1 collaboration

Zhen Jia 1 collaboration

Manuel Castro 1 collaboration

Nico Kemnitz 1 collaboration

Dodam Ih 1 collaboration

Forrest Collman 1 collaboration

Davi D Bock 1 collaboration

H Sebastian Seung 1 collaboration

None None 1 collaboration

Caroline Malin-Mayor 1 collaboration

Peter Hirsch 1 collaboration

Leo Guignard 1 collaboration

Katie McDole 1 collaboration

Yinan Wan 1 collaboration

William C Lemon 1 collaboration

Dagmar Kainmueller 1 collaboration

Philipp J Keller 1 collaboration