Javier Rodriguez-Hernaez

Affiliations

Department of Pathology, NYULSoM, New York, NY, USA.

Publications (7)

RNA Interactions Are Essential for CTCF-Mediated Genome Organization.

Molecular cell

Avec: Ricardo Saldaña-Meyer , Javier Rodriguez-Hernaez , Thelma Escobar , Mayilaadumveettil Nishana , Karina Jácome-López , Elphege P Nora , Benoit G Bruneau , Aristotelis Tsirigos , Mayra Furlan-Magaril , Jane Skok , Danny Reinberg

3D Enhancer-promoter networks provide predictive features for gene expression and coregulation in early embryonic lineages.

Nature structural & molecular biology

Avec: Dylan Murphy , Eralda Salataj , Dafne Campigli Di Giammartino , Javier Rodriguez-Hernaez , Andreas Kloetgen , Vidur Garg , Erin Char , Christopher M Uyehara , Ly-Sha Ee , UkJin Lee , Matthias Stadtfeld , Anna-Katerina Hadjantonakis , Aristotelis Tsirigos , Alexander Polyzos , Effie Apostolou

NSD2 overexpression drives clustered chromatin and transcriptional changes in a subset of insulated domains.

Nature communications

Avec: Priscillia Lhoumaud , Sana Badri , Javier Rodriguez-Hernaez , Theodore Sakellaropoulos , Gunjan Sethia , Andreas Kloetgen , MacIntosh Cornwell , Sourya Bhattacharyya , Ferhat Ay , Richard Bonneau , Aristotelis Tsirigos , Jane A Skok

Author Correction: Defining the relative and combined contribution of CTCF and CTCFL to genomic regulation.

Genome biology

Avec: Mayilaadumveettil Nishana , Caryn Ha , Javier Rodriguez-Hernaez , Ali Ranjbaran , Erica Chio , Elphege P Nora , Sana B Badri , Andreas Kloetgen , Benoit G Bruneau , Aristotelis Tsirigos , Jane A Skok

Defining the relative and combined contribution of CTCF and CTCFL to genomic regulation.

Genome biology

Avec: Mayilaadumveettil Nishana , Caryn Ha , Javier Rodriguez-Hernaez , Ali Ranjbaran , Erica Chio , Elphege P Nora , Sana B Badri , Andreas Kloetgen , Benoit G Bruneau , Aristotelis Tsirigos , Jane A Skok

Cell-type-specific prediction of 3D chromatin organization enables high-throughput in silico genetic screening.

Nature biotechnology

Avec: Jimin Tan , Nina Shenker-Tauris , Javier Rodriguez-Hernaez , Eric Wang , Theodore Sakellaropoulos , Francesco Boccalatte , Palaniraja Thandapani , Jane Skok , Iannis Aifantis , David Fenyö , Bo Xia , Aristotelis Tsirigos

Systematic mapping and modeling of 3D enhancer-promoter interactions in early mouse embryonic lineages reveal regulatory principles that determine the levels and cell-type specificity of gene expression.

bioRxiv : the preprint server for biology

Avec: Dylan Murphy , Eralda Salataj , Dafne Campigli Di Giammartino , Javier Rodriguez-Hernaez , Andreas Kloetgen , Vidur Garg , Erin Char , Christopher M Uyehara , Ly-Sha Ee , UkJin Lee , Matthias Stadtfeld , Anna-Katerina Hadjantonakis , Aristotelis Tsirigos , Alexander Polyzos , Effie Apostolou

Réseau de co-auteurs

Aristotelis Tsirigos 7 collaborations

Andreas Kloetgen 5 collaborations

Mayilaadumveettil Nishana 3 collaborations

Elphege P Nora 3 collaborations

Benoit G Bruneau 3 collaborations

Jane A Skok 3 collaborations

Jane Skok 2 collaborations

Dylan Murphy 2 collaborations

Eralda Salataj 2 collaborations

Dafne Campigli Di Giammartino 2 collaborations

Vidur Garg 2 collaborations

Erin Char 2 collaborations

Christopher M Uyehara 2 collaborations

Ly-Sha Ee 2 collaborations

UkJin Lee 2 collaborations

Matthias Stadtfeld 2 collaborations

Anna-Katerina Hadjantonakis 2 collaborations

Alexander Polyzos 2 collaborations

Effie Apostolou 2 collaborations

Theodore Sakellaropoulos 2 collaborations

Caryn Ha 2 collaborations

Ali Ranjbaran 2 collaborations

Erica Chio 2 collaborations

Sana B Badri 2 collaborations

Ricardo Saldaña-Meyer 1 collaboration

Thelma Escobar 1 collaboration

Karina Jácome-López 1 collaboration

Mayra Furlan-Magaril 1 collaboration

Danny Reinberg 1 collaboration

Priscillia Lhoumaud 1 collaboration

Sana Badri 1 collaboration

Gunjan Sethia 1 collaboration

MacIntosh Cornwell 1 collaboration

Sourya Bhattacharyya 1 collaboration

Ferhat Ay 1 collaboration

Richard Bonneau 1 collaboration

Jimin Tan 1 collaboration

Nina Shenker-Tauris 1 collaboration

Eric Wang 1 collaboration

Francesco Boccalatte 1 collaboration

Palaniraja Thandapani 1 collaboration

Iannis Aifantis 1 collaboration

David Fenyö 1 collaboration

Bo Xia 1 collaboration