Javier Tamames

Affiliations

Centro Nacional de Biotecnología. Consejo Superior de Investigaciones Científicas (CSIC), Cantoblanco, Madrid, USA.

Publications (16)

Metagenomic analysis of an urban resistome before and after wastewater treatment.

Scientific reports

Avec: Felipe Lira , Ivone Vaz-Moreira , Javier Tamames , Célia M Manaia , José Luis Martínez

Microdiversity ensures the maintenance of functional microbial communities under changing environmental conditions.

The ISME journal

Avec: Natalia García-García , Javier Tamames , Alexandra M Linz , Carlos Pedrós-Alió , Fernando Puente-Sánchez

A dimensional reduction approach to modulate the core ruminal microbiome associated with methane emissions via selective breeding.

Journal of dairy science

Avec: Alejandro Saborío-Montero , Adrían López-García , Mónica Gutiérrez-Rivas , Raquel Atxaerandio , Idoia Goiri , Aser García-Rodriguez , José A Jiménez-Montero , Carmen González , Javier Tamames , Fernando Puente-Sánchez , Luis Varona , Magdalena Serrano , Cristina Ovilo , Oscar González-Recio

Fungal and ciliate protozoa are the main rumen microbes associated with methane emissions in dairy cattle.

GigaScience

Avec: Adrián López-García , Alejandro Saborío-Montero , Mónica Gutiérrez-Rivas , Raquel Atxaerandio , Idoia Goiri , Aser García-Rodríguez , Jose A Jiménez-Montero , Carmen González , Javier Tamames , Fernando Puente-Sánchez , Magdalena Serrano , Rafael Carrasco , Cristina Óvilo , Oscar González-Recio

Microbiota characterization of sheep milk and its association with somatic cell count using 16s rRNA gene sequencing.

Journal of animal breeding and genetics = Zeitschrift fur Tierzuchtung und Zuchtungsbiologie

Avec: Cristina Esteban-Blanco , Beatriz Gutiérrez-Gil , Fernando Puente-Sánchez , Héctor Marina , Javier Tamames , Alberto Acedo , Juan José Arranz

M&Ms: a versatile software for building microbial mock communities.

Bioinformatics (Oxford, England)

Avec: Natalia García-García , Javier Tamames , Fernando Puente-Sánchez

Quantifying microbial guilds.

ISME communications

Avec: Juan Rivas-Santisteban , Pablo Yubero , Semidán Robaina-Estévez , José M González , Javier Tamames , Carlos Pedrós-Alió

Mycobiome Profiles in Breast Milk from Healthy Women Depend on Mode of Delivery, Geographic Location, and Interaction with Bacteria.

Applied and environmental microbiology

Avec: Alba Boix-Amorós , Fernando Puente-Sánchez , Elloise du Toit , Kaisa M Linderborg , Yumei Zhang , Baoru Yang , Seppo Salminen , Erika Isolauri , Javier Tamames , Alex Mira , Maria Carmen Collado

Metagenomic and metabolic analyses of poly-extreme microbiome from an active crater volcano lake.

Environmental research

Avec: Betsy Anaid Peña-Ocaña , Cesar Ivan Ovando-Ovando , Fernando Puente-Sánchez , Javier Tamames , Luis Eduardo Servín-Garcidueñas , Elena González-Toril , Wilbert Gutiérrez-Sarmiento , Ricardo Jasso-Chávez , Víctor Manuel Ruíz-Valdiviezo

Cross-biome microbial networks reveal functional redundancy and suggest genome reduction through functional complementarity.

Communications biology

Avec: Fernando Puente-Sánchez , Alberto Pascual-García , Ugo Bastolla , Carlos Pedrós-Alió , Javier Tamames

Bacterioplankton taxa compete for iron along the early spring-summer transition in the Arctic Ocean.

Ecology and evolution

Avec: Fernando Puente-Sánchez , Luis Alberto Macías-Pérez , Karley L Campbell , Marta Royo-Llonch , Vanessa Balagué , Pablo Sánchez , Javier Tamames , Christopher John Mundy , Carlos Pedrós-Alió

In situ metagenomics: A platform for rapid sequencing and analysis of metagenomes in less than one day.

Molecular ecology resources

Avec: Javier Tamames , Diego Jiménez , Álvaro Redondo , Sandra Martínez-García , Asunción de Los Rios

SQMtools: automated processing and visual analysis of 'omics data with R and anvi'o.

BMC bioinformatics

Avec: Fernando Puente-Sánchez , Natalia García-García , Javier Tamames

Assessing the performance of different approaches for functional and taxonomic annotation of metagenomes.

BMC genomics

Avec: Javier Tamames , Marta Cobo-Simón , Fernando Puente-Sánchez

In silico evaluation and selection of the best 16S rRNA gene primers for use in next-generation sequencing to detect oral bacteria and archaea.

Microbiome

Avec: Alba Regueira-Iglesias , Lara Vázquez-González , Carlos Balsa-Castro , Nicolás Vila-Blanco , Triana Blanco-Pintos , Javier Tamames , Maria José Carreira , Inmaculada Tomás

Assessment of short-read shotgun sequencing and microbiome analysis of faecal samples to discriminate between equol producers and non-producers.

Beneficial microbes

Avec: L Vázquez , R Cabrera-Rubio , J Tamames , B Mayo , A B Flórez

Réseau de co-auteurs

Fernando Puente-Sánchez 11 collaborations

Carlos Pedrós-Alió 4 collaborations

Natalia García-García 3 collaborations

Alejandro Saborío-Montero 2 collaborations

Mónica Gutiérrez-Rivas 2 collaborations

Raquel Atxaerandio 2 collaborations

Idoia Goiri 2 collaborations

Carmen González 2 collaborations

Magdalena Serrano 2 collaborations

Oscar González-Recio 2 collaborations

Felipe Lira 1 collaboration

Ivone Vaz-Moreira 1 collaboration

Célia M Manaia 1 collaboration

José Luis Martínez 1 collaboration

Alexandra M Linz 1 collaboration

Adrían López-García 1 collaboration

Aser García-Rodriguez 1 collaboration

José A Jiménez-Montero 1 collaboration

Luis Varona 1 collaboration

Cristina Ovilo 1 collaboration

Adrián López-García 1 collaboration

Aser García-Rodríguez 1 collaboration

Jose A Jiménez-Montero 1 collaboration

Rafael Carrasco 1 collaboration

Cristina Óvilo 1 collaboration

Cristina Esteban-Blanco 1 collaboration

Beatriz Gutiérrez-Gil 1 collaboration

Héctor Marina 1 collaboration

Alberto Acedo 1 collaboration

Juan José Arranz 1 collaboration

Juan Rivas-Santisteban 1 collaboration

Pablo Yubero 1 collaboration

Semidán Robaina-Estévez 1 collaboration

José M González 1 collaboration

Alba Boix-Amorós 1 collaboration

Elloise du Toit 1 collaboration

Kaisa M Linderborg 1 collaboration

Yumei Zhang 1 collaboration

Baoru Yang 1 collaboration

Seppo Salminen 1 collaboration

Erika Isolauri 1 collaboration

Alex Mira 1 collaboration

Maria Carmen Collado 1 collaboration

Betsy Anaid Peña-Ocaña 1 collaboration

Cesar Ivan Ovando-Ovando 1 collaboration

Luis Eduardo Servín-Garcidueñas 1 collaboration

Elena González-Toril 1 collaboration

Wilbert Gutiérrez-Sarmiento 1 collaboration

Ricardo Jasso-Chávez 1 collaboration

Víctor Manuel Ruíz-Valdiviezo 1 collaboration

Alberto Pascual-García 1 collaboration

Ugo Bastolla 1 collaboration

Luis Alberto Macías-Pérez 1 collaboration

Karley L Campbell 1 collaboration

Marta Royo-Llonch 1 collaboration

Vanessa Balagué 1 collaboration

Pablo Sánchez 1 collaboration

Christopher John Mundy 1 collaboration

Diego Jiménez 1 collaboration

Álvaro Redondo 1 collaboration

Sandra Martínez-García 1 collaboration

Asunción de Los Rios 1 collaboration

Marta Cobo-Simón 1 collaboration

Alba Regueira-Iglesias 1 collaboration

Lara Vázquez-González 1 collaboration

Carlos Balsa-Castro 1 collaboration

Nicolás Vila-Blanco 1 collaboration

Triana Blanco-Pintos 1 collaboration

Maria José Carreira 1 collaboration

Inmaculada Tomás 1 collaboration

L Vázquez 1 collaboration

R Cabrera-Rubio 1 collaboration

J Tamames 1 collaboration

B Mayo 1 collaboration

A B Flórez 1 collaboration