Metagenomic and metabolic analyses of poly-extreme microbiome from an active crater volcano lake.

Anaerobic metabolism Archaea Methane production Poly-extreme conditions Sulfate reduction

Journal

Environmental research
ISSN: 1096-0953
Titre abrégé: Environ Res
Pays: Netherlands
ID NLM: 0147621

Informations de publication

Date de publication:
01 2022
Historique:
received: 13 04 2021
revised: 02 08 2021
accepted: 05 08 2021
pubmed: 18 8 2021
medline: 15 12 2021
entrez: 17 8 2021
Statut: ppublish

Résumé

El Chichón volcano is one of the most active volcanoes in Mexico. Previous studies have described its poly-extreme conditions and its bacterial composition, although the functional features of the complete microbiome have not been characterized yet. By using metabarcoding analysis, metagenomics, metabolomics and enzymology techniques, the microbiome of the crater lake was characterized in this study. New information is provided on the taxonomic and functional diversity of the representative Archaea phyla, Crenarchaeota and Euryarchaeota, as well as those that are representative of Bacteria, Thermotogales and Aquificae. With culture of microbial consortia and with the genetic information collected from the natural environment sampling, metabolic interactions were identified between prokaryotes, which can withstand multiple extreme conditions. The existence of a close relationship between the biogeochemical cycles of carbon and sulfur in an active volcano has been proposed, while the relationship in the energy metabolism of thermoacidophilic bacteria and archaea in this multi-extreme environment was biochemically revealed for the first time. These findings contribute towards understanding microbial metabolism under extreme conditions, and provide potential knowledge pertaining to "microbial dark matter", which can be applied to biotechnological processes and evolutionary studies.

Identifiants

pubmed: 34400165
pii: S0013-9351(21)01156-7
doi: 10.1016/j.envres.2021.111862
pii:
doi:

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

111862

Informations de copyright

Copyright © 2021 Elsevier Inc. All rights reserved.

Auteurs

Betsy Anaid Peña-Ocaña (BA)

Tecnologico Nacional de México / IT de Tuxtla Gutierrez, Tuxtla Gutiérrez, Chiapas, Mexico; Departamento de Bioquímica, Instituto Nacional de Cardiología, Mexico City, Mexico.

Cesar Ivan Ovando-Ovando (CI)

Tecnologico Nacional de México / IT de Tuxtla Gutierrez, Tuxtla Gutiérrez, Chiapas, Mexico.

Fernando Puente-Sánchez (F)

Microbiome Analysis Laboratory, Systems Biology Department, Centro Nacional de Biotecnología, CSIC, Madrid, Spain; Department of Aquatic Sciences and Assessment, Swedish University for Agricultural Sciences (SLU), Lennart Hjelms väg 9, 756 51, Uppsala, Sweden.

Javier Tamames (J)

Microbiome Analysis Laboratory, Systems Biology Department, Centro Nacional de Biotecnología, CSIC, Madrid, Spain.

Luis Eduardo Servín-Garcidueñas (LE)

Laboratorio de Microbiómica, Escuela Nacional de Estudios Superiores Unidad Morelia, UNAM, Morelia, Michoacán, Mexico.

Elena González-Toril (E)

Centro de Astrobiología, CAB (INTA-CSIC), Torrejón de Ardoz, Spain.

Wilbert Gutiérrez-Sarmiento (W)

Tecnologico Nacional de México / IT de Tuxtla Gutierrez, Tuxtla Gutiérrez, Chiapas, Mexico.

Ricardo Jasso-Chávez (R)

Departamento de Bioquímica, Instituto Nacional de Cardiología, Mexico City, Mexico. Electronic address: ricardo.jasso@cardiologia.org.mx.

Víctor Manuel Ruíz-Valdiviezo (VM)

Tecnologico Nacional de México / IT de Tuxtla Gutierrez, Tuxtla Gutiérrez, Chiapas, Mexico. Electronic address: victor.rv@tuxtla.tecnm.mx.

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