Kalai Mathee

Affiliations

Department of Human and Molecular Genetics, Herbert Wertheim College of Medicine, Florida International University, Miami, FL, USA. matheelabfor65roses@gmail.com.
Biomolecular Sciences Institute, Florida International University, Miami, FL, USA. matheelabfor65roses@gmail.com.

Publications (23)

Differences in gut microbiota between Dutch and South-Asian Surinamese: potential implications for type 2 diabetes mellitus.

Scientific reports

Avec: Eric I Nayman , Brooke A Schwartz , Michaela Polmann , Alayna C Gumabong , Max Nieuwdorp , Trevor Cickovski , Kalai Mathee

The gut microbiome and neuropsychiatric disorders: implications for attention deficit hyperactivity disorder (ADHD).

Journal of medical microbiology

Avec: Kalai Mathee , Trevor Cickovski , Alok Deoraj , Melanie Stollstorff , Giri Narasimhan

Causal effects in microbiomes using interventional calculus.

Scientific reports

Avec: Musfiqur Sazal , Vitalii Stebliankin , Kalai Mathee , Changwon Yoo , Giri Narasimhan

Journal of medical microbiology

Avec: Kalai Mathee , Hilary F Logan , Norman K Fry

Longitudinal assessment of nonavalent vaccine HPV types in a sample of sexually active African American women from ten U.S. Cities.

Vaccine

Avec: P Madhivanan , K Krupp , M Coudray , B Colbert , D Ruiz-Perez , H Cui , N Bokulich , G Narasimhan , K Mathee , R L Cook , J Schwebke , D Roe

JMM Profile: Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2).

Journal of medical microbiology

Avec: Timothy J J Inglis , Kalai Mathee

Effect of metronidazole on vaginal microbiota associated with asymptomatic bacterial vaginosis.

Access microbiology

Avec: Daniel Ruiz-Perez , Makella S Coudray , Brett Colbert , Karl Krupp , Hansi Kumari , Vitalii Stebliankin , Kalai Mathee , Robert L Cook , Jane Schwebke , Giri Narasimhan , Purnima Madhivanan

New dynamic microreactor system to mimic biofilm formation and test anti-biofilm activity of nanoparticles.

Applied microbiology and biotechnology

Avec: Natalia Bourguignon , Vivek Kamat , Maximiliano Perez , Kalai Mathee , Betiana Lerner , Shekhar Bhansali

Microbiome Dysbiosis Shows Strong Association of Gut-Derived Altered Metabolomic Profile in Gulf War Chronic Multisymptom Illness Symptom Persistence Following Western Diet Feeding and Development of Obesity.

International journal of molecular sciences

Avec: Dipro Bose , Vitalli Stebliankin , Trevor Cickovski , Punnag Saha , Ayushi Trivedi , Subhajit Roy , Madhura More , Ashok Tuteja , Kalai Mathee , Giri Narasimhan , Saurabh Chatterjee

Inferring directional relationships in microbial communities using signed Bayesian networks.

BMC genomics

Avec: Musfiqur Sazal , Kalai Mathee , Daniel Ruiz-Perez , Trevor Cickovski , Giri Narasimhan

Multi-Run Concrete Autoencoder to Identify Prognostic lncRNAs for 12 Cancers.

International journal of molecular sciences

Avec: Abdullah Al Mamun , Raihanul Bari Tanvir , Masrur Sobhan , Kalai Mathee , Giri Narasimhan , Gregory E Holt , Ananda Mohan Mondal

Prior exposure to microcystin alters host gut resistome and is associated with dysregulated immune homeostasis in translatable mouse models.

Scientific reports

Avec: Punnag Saha , Dipro Bose , Vitalii Stebliankin , Trevor Cickovski , Ratanesh K Seth , Dwayne E Porter , Bryan W Brooks , Kalai Mathee , Giri Narasimhan , Rita Colwell , Geoff I Scott , Saurabh Chatterjee

Potential Autoimmunity Resulting from Molecular Mimicry between SARS-CoV-2 Spike and Human Proteins.

Viruses

Avec: Janelle Nunez-Castilla , Vitalii Stebliankin , Prabin Baral , Christian A Balbin , Masrur Sobhan , Trevor Cickovski , Ananda Mohan Mondal , Giri Narasimhan , Prem Chapagain , Kalai Mathee , Jessica Siltberg-Liberles

Raising awareness of antimicrobial resistance: development of an 'antibiotic footprint calculator'.

The Journal of antimicrobial chemotherapy

Avec: Ravikanya Prapharsavat , Rattanasiri Kittikongnapang , Chokdee Smithkittipol , Warute Udomrat , Sukanya Numsawat , Anastasia Hernandez-Koutoucheva , Bhensri Naemiratch , Chalita Chomkatekaew , Chanaki Amaratunga , John Bleho , Kalai Mathee , Mira Leonie Schneiders , Napat Khirikoekkong , Nipaphan Kanthawang , Nithima Sumpradit , Rapee Suveeranont , Supa-At Asarath , Tassawan Poomchaichote , William Schilling , Xin Hui S Chan , Anne Osterrieder , Phaik Yeong Cheah , Direk Limmathurotsakul

Attention Deficit Hyperactivity Disorder (ADHD) and the gut microbiome: An ecological perspective.

PloS one

Avec: Trevor Cickovski , Kalai Mathee , Gloria Aguirre , Gorakh Tatke , Alejandro Hermida , Giri Narasimhan , Melanie Stollstorff

Unfolding and de-confounding: biologically meaningful causal inference from longitudinal multi-omic networks using METALICA.

mSystems

Avec: Daniel Ruiz-Perez , Isabella Gimon , Musfiqur Sazal , Kalai Mathee , Giri Narasimhan

Rhizospheric and endophytic Pseudomonas aeruginosa in edible vegetable plants share molecular and metabolic traits with clinical isolates.

Journal of applied microbiology

Avec: Sakthivel Ambreetha , Ponnusamy Marimuthu , Kalai Mathee , Dananjeyan Balachandar

Dynamic Bayesian Networks for Integrating Multi-omics Time Series Microbiome Data.

mSystems

Avec: Daniel Ruiz-Perez , Jose Lugo-Martinez , Natalia Bourguignon , Kalai Mathee , Betiana Lerner , Ziv Bar-Joseph , Giri Narasimhan

So you think you can PLS-DA?

BMC bioinformatics

Avec: Daniel Ruiz-Perez , Haibin Guan , Purnima Madhivanan , Kalai Mathee , Giri Narasimhan

Lower respiratory tract microbiome composition and community interactions in smokers.

Access microbiology

Avec: Michael Campos , Trevor Cickovski , Mitch Fernandez , Melita Jaric , Adam Wanner , Gregory Holt , Elio Donna , Eliana Mendes , Eugenia Silva-Herzog , Lisa Schneper , Jonathan Segal , David Moraga Amador , Juan Daniel Riveros , Vanessa Aguiar-Pulido , Santanu Banerjee , Matthias Salathe , Kalai Mathee , Giri Narasimhan

Unfolding and De-confounding: Biologically meaningful causal inference from longitudinal multi-omic networks using METALICA.

bioRxiv : the preprint server for biology

Avec: Daniel Ruiz-Perez , Isabella Gimon , Musfiqur Sazal , Kalai Mathee , Giri Narasimhan

Detection of SARS-CoV-2 in high-efficiency particulate air (HEPA) filters of low-cost air purifiers in community-based organizations.

Environmental monitoring and assessment

Avec: Rachel D Clarke , Nana Aisha Garba , Manuel A Barbieri , Leonardo Acuna , Marianna Baum , Maribel Saad Rodriguez , Hansel Frias , Paulina Saldarriaga , Troy Stefano , Kalai Mathee , Giri Narasimhan , David R Brown

A novel approach for combining the metagenome, metaresistome, metareplicome and causal inference to determine the microbes and their antibiotic resistance gene repertoire that contribute to dysbiosis.

Microbial genomics

Avec: Vitalii Stebliankin , Musfiqur Sazal , Camilo Valdes , Kalai Mathee , Giri Narasimhan

Réseau de co-auteurs

Giri Narasimhan 16 collaborations

Trevor Cickovski 8 collaborations

Daniel Ruiz-Perez 6 collaborations

Musfiqur Sazal 5 collaborations

Vitalii Stebliankin 5 collaborations

Melanie Stollstorff 2 collaborations

Purnima Madhivanan 2 collaborations

Natalia Bourguignon 2 collaborations

Betiana Lerner 2 collaborations

Dipro Bose 2 collaborations

Punnag Saha 2 collaborations

Saurabh Chatterjee 2 collaborations

Masrur Sobhan 2 collaborations

Ananda Mohan Mondal 2 collaborations

Isabella Gimon 2 collaborations

Eric I Nayman 1 collaboration

Brooke A Schwartz 1 collaboration

Michaela Polmann 1 collaboration

Alayna C Gumabong 1 collaboration

Max Nieuwdorp 1 collaboration

Alok Deoraj 1 collaboration

Changwon Yoo 1 collaboration

Hilary F Logan 1 collaboration

Norman K Fry 1 collaboration

P Madhivanan 1 collaboration

K Krupp 1 collaboration

M Coudray 1 collaboration

B Colbert 1 collaboration

D Ruiz-Perez 1 collaboration

H Cui 1 collaboration

N Bokulich 1 collaboration

G Narasimhan 1 collaboration

K Mathee 1 collaboration

R L Cook 1 collaboration

J Schwebke 1 collaboration

D Roe 1 collaboration

Timothy J J Inglis 1 collaboration

Makella S Coudray 1 collaboration

Brett Colbert 1 collaboration

Karl Krupp 1 collaboration

Hansi Kumari 1 collaboration

Robert L Cook 1 collaboration

Jane Schwebke 1 collaboration

Vivek Kamat 1 collaboration

Maximiliano Perez 1 collaboration

Shekhar Bhansali 1 collaboration

Vitalli Stebliankin 1 collaboration

Ayushi Trivedi 1 collaboration

Subhajit Roy 1 collaboration

Madhura More 1 collaboration

Ashok Tuteja 1 collaboration

Abdullah Al Mamun 1 collaboration

Raihanul Bari Tanvir 1 collaboration

Gregory E Holt 1 collaboration

Ratanesh K Seth 1 collaboration

Dwayne E Porter 1 collaboration

Bryan W Brooks 1 collaboration

Rita Colwell 1 collaboration

Geoff I Scott 1 collaboration

Janelle Nunez-Castilla 1 collaboration

Prabin Baral 1 collaboration

Christian A Balbin 1 collaboration

Prem Chapagain 1 collaboration

Jessica Siltberg-Liberles 1 collaboration

Ravikanya Prapharsavat 1 collaboration

Rattanasiri Kittikongnapang 1 collaboration

Chokdee Smithkittipol 1 collaboration

Warute Udomrat 1 collaboration

Sukanya Numsawat 1 collaboration

Anastasia Hernandez-Koutoucheva 1 collaboration

Bhensri Naemiratch 1 collaboration

Chalita Chomkatekaew 1 collaboration

Chanaki Amaratunga 1 collaboration

John Bleho 1 collaboration

Mira Leonie Schneiders 1 collaboration

Napat Khirikoekkong 1 collaboration

Nipaphan Kanthawang 1 collaboration

Nithima Sumpradit 1 collaboration

Rapee Suveeranont 1 collaboration

Supa-At Asarath 1 collaboration

Tassawan Poomchaichote 1 collaboration

William Schilling 1 collaboration

Xin Hui S Chan 1 collaboration

Anne Osterrieder 1 collaboration

Phaik Yeong Cheah 1 collaboration

Direk Limmathurotsakul 1 collaboration

Gloria Aguirre 1 collaboration

Gorakh Tatke 1 collaboration

Alejandro Hermida 1 collaboration

Sakthivel Ambreetha 1 collaboration

Ponnusamy Marimuthu 1 collaboration

Dananjeyan Balachandar 1 collaboration

Jose Lugo-Martinez 1 collaboration

Ziv Bar-Joseph 1 collaboration

Haibin Guan 1 collaboration

Michael Campos 1 collaboration

Mitch Fernandez 1 collaboration

Melita Jaric 1 collaboration

Adam Wanner 1 collaboration

Gregory Holt 1 collaboration

Elio Donna 1 collaboration

Eliana Mendes 1 collaboration

Eugenia Silva-Herzog 1 collaboration

Lisa Schneper 1 collaboration

Jonathan Segal 1 collaboration

David Moraga Amador 1 collaboration

Juan Daniel Riveros 1 collaboration

Vanessa Aguiar-Pulido 1 collaboration

Santanu Banerjee 1 collaboration

Matthias Salathe 1 collaboration

Rachel D Clarke 1 collaboration

Nana Aisha Garba 1 collaboration

Manuel A Barbieri 1 collaboration

Leonardo Acuna 1 collaboration

Marianna Baum 1 collaboration

Maribel Saad Rodriguez 1 collaboration

Hansel Frias 1 collaboration

Paulina Saldarriaga 1 collaboration

Troy Stefano 1 collaboration

David R Brown 1 collaboration

Camilo Valdes 1 collaboration