M Essack

Affiliations

Computational Bioscience Research Center (CBRC), King Abdullah University of Science and Technology (KAUST), Thuwal, 23955-6900, Kingdom of Saudi Arabia. magbubah.essack@kaust.edu.sa.

ORCID: http://orcid.org/0000-0003-2709-5356

Publications (29)

Comparative genomics study reveals Red Sea Bacillus with characteristics associated with potential microbial cell factories (MCFs).

Scientific reports

Avec: G Othoum , S Prigent , A Derouiche , L Shi , A Bokhari , S Alamoudi , S Bougouffa , X Gao , R Hoehndorf , S T Arold , T Gojobori , H Hirt , F F Lafi , J Nielsen , V B Bajic , I Mijakovic , M Essack

The X Files: "The Mystery of X Chromosome Instability in Alzheimer's Disease".

Frontiers in genetics

Avec: Vladan P Bajic , Magbubah Essack , Lada Zivkovic , Alan Stewart , Sonja Zafirovic , Vladimir B Bajic , Takashi Gojobori , Esma Isenovic , Biljana Spremo-Potparevic

Computational and structural biotechnology journal

Avec: Somayah Albaradei , Francesco Napolitano , Maha A Thafar , Takashi Gojobori , Magbubah Essack , Xin Gao

Exploiting machine learning models to identify novel Alzheimer's disease biomarkers and potential targets.

Scientific reports

Avec: Hind Alamro , Maha A Thafar , Somayah Albaradei , Takashi Gojobori , Magbubah Essack , Xin Gao

Diabetic cardiomyopathy: The role of microRNAs and long non-coding RNAs.

Frontiers in endocrinology

Avec: Mirjana T Macvanin , Zoran Gluvic , Jelena Radovanovic , Magbubah Essack , Xin Gao , Esma R Isenovic

BioBBC: a multi-feature model that enhances the detection of biomedical entities.

Scientific reports

Avec: Hind Alamro , Takashi Gojobori , Magbubah Essack , Xin Gao

Bioprospecting desert plant Bacillus endophytic strains for their potential to enhance plant stress tolerance.

Scientific reports

Avec: Ameerah Bokhari , Magbubah Essack , Feras F Lafi , Cristina Andres-Barrao , Rewaa Jalal , Soha Alamoudi , Rozaimi Razali , Hanin Alzubaidy , Kausar H Shah , Shahid Siddique , Vladimir B Bajic , Heribert Hirt , Maged M Saad

Literature-Based Enrichment Insights into Redox Control of Vascular Biology.

Oxidative medicine and cellular longevity

Avec: Magbubah Essack , Adil Salhi , Julijana Stanimirovic , Faroug Tifratene , Arwa Bin Raies , Arnaud Hungler , Mahmut Uludag , Christophe Van Neste , Andreja Trpkovic , Vladan P Bajic , Vladimir B Bajic , Esma R Isenovic

Antioxidant enzymes expression in lymphocytes of patients undergoing carotid endarterectomy.

Medical hypotheses

Avec: Milan Obradovic , Sonja Zafirovic , Magbubah Essack , Jelena Dimitrov , Lada Zivkovic , Biljana Spremo-Potparevic , Djordje Radak , Vladimir B Bajic , Esma R Isenovic

PATH

ACS synthetic biology

Avec: Olaa Motwalli , Mahmut Uludag , Ivan Mijakovic , Meshari Alazmi , Vladimir B Bajic , Takashi Gojobori , Xin Gao , Magbubah Essack

DTiGEMS+: drug-target interaction prediction using graph embedding, graph mining, and similarity-based techniques.

Journal of cheminformatics

Avec: Maha A Thafar , Rawan S Olayan , Haitham Ashoor , Somayah Albaradei , Vladimir B Bajic , Xin Gao , Takashi Gojobori , Magbubah Essack

Leptin and Obesity: Role and Clinical Implication.

Frontiers in endocrinology

Avec: Milan Obradovic , Emina Sudar-Milovanovic , Sanja Soskic , Magbubah Essack , Swati Arya , Alan J Stewart , Takashi Gojobori , Esma R Isenovic

Combining biomedical knowledge graphs and text to improve predictions for drug-target interactions and drug-indications.

PeerJ

Avec: Mona Alshahrani , Abdullah Almansour , Asma Alkhaldi , Maha A Thafar , Mahmut Uludag , Magbubah Essack , Robert Hoehndorf

Role of C-Reactive Protein in Diabetic Inflammation.

Mediators of inflammation

Avec: Julijana Stanimirovic , Jelena Radovanovic , Katarina Banjac , Milan Obradovic , Magbubah Essack , Sonja Zafirovic , Zoran Gluvic , Takashi Gojobori , Esma R Isenovic

New biomarkers: prospect for diagnosis and monitoring of thyroid disease.

Frontiers in endocrinology

Avec: Mirjana T Macvanin , Zoran M Gluvic , Bozidarka L Zaric , Magbubah Essack , Xin Gao , Esma R Isenovic

MicroRNA networks linked with BRCA1/2, PTEN, and common genes for Alzheimer's disease and breast cancer share highly enriched pathways that may unravel targets for the AD/BC comorbidity treatment.

Computational biology and chemistry

Avec: Nina Petrović , Magbubah Essack , Ahmad Šami , George Perry , Takashi Gojobori , Esma R Isenović , Vladan P Bajić

OncoRTT: Predicting novel oncology-related therapeutic targets using BERT embeddings and omics features.

Frontiers in genetics

Avec: Maha A Thafar , Somayah Albaradei , Mahmut Uludag , Mona Alshahrani , Takashi Gojobori , Magbubah Essack , Xin Gao

Nitric oxide, thyroglobulin, and calcitonin: unraveling the nature of thyroid nodules.

Frontiers in endocrinology

Avec: Vladimir S Samardzic , Mirjana T Macvanin , Sonja S Zafirovic , Milan M Obradovic , Zoran M Gluvic , Jasmina Grubin , Xin Gao , Magbubah Essack , Esma R Isenovic

New insights on the cardiovascular effects of IGF-1.

Frontiers in endocrinology

Avec: Mirjana Macvanin , Zoran Gluvic , Jelena Radovanovic , Magbubah Essack , Xin Gao , Esma R Isenovic

HbA1C as a marker of retrograde glycaemic control in diabetes patient with co-existed beta-thalassaemia: A case report and a literature review.

Journal of clinical pharmacy and therapeutics

Avec: Zoran Gluvic , Milan Obradovic , Milena Lackovic , Vladimir Samardzic , Jelena Tica Jevtic , Magbubah Essack , Vladimir B Bajic , Esma R Isenovic

Comparison Study of Computational Prediction Tools for Drug-Target Binding Affinities.

Frontiers in chemistry

Avec: Maha Thafar , Arwa Bin Raies , Somayah Albaradei , Magbubah Essack , Vladimir B Bajic

Hybrid model for efficient prediction of poly(A) signals in human genomic DNA.

Methods (San Diego, Calif.)

Avec: Fahad Albalawi , Abderrazak Chahid , Xingang Guo , Somayah Albaradei , Arturo Magana-Mora , Boris R Jankovic , Mahmut Uludag , Christophe Van Neste , Magbubah Essack , Taous-Meriem Laleg-Kirati , Vladimir B Bajic

Atherosclerosis Linked to Aberrant Amino Acid Metabolism and Immunosuppressive Amino Acid Catabolizing Enzymes.

Frontiers in immunology

Avec: Bozidarka L Zaric , Jelena N Radovanovic , Zoran Gluvic , Alan J Stewart , Magbubah Essack , Olaa Motwalli , Takashi Gojobori , Esma R Isenovic

DTi2Vec: Drug-target interaction prediction using network embedding and ensemble learning.

Journal of cheminformatics

Avec: Maha A Thafar , Rawan S Olayan , Somayah Albaradei , Vladimir B Bajic , Takashi Gojobori , Magbubah Essack , Xin Gao

Splice2Deep: An ensemble of deep convolutional neural networks for improved splice site prediction in genomic DNA.

Gene

Avec: Somayah Albaradei , Arturo Magana-Mora , Maha Thafar , Mahmut Uludag , Vladimir B Bajic , Takashi Gojobori , Magbubah Essack , Boris R Jankovic

DES-Tcell is a knowledgebase for exploring immunology-related literature.

Scientific reports

Avec: Ahdab AlSaieedi , Adil Salhi , Faroug Tifratene , Arwa Bin Raies , Arnaud Hungler , Mahmut Uludag , Christophe Van Neste , Vladimir B Bajic , Takashi Gojobori , Magbubah Essack

The protective role of nutritional antioxidants against oxidative stress in thyroid disorders.

Frontiers in endocrinology

Avec: Mirjana T Macvanin , Zoran Gluvic , Sonja Zafirovic , Xin Gao , Magbubah Essack , Esma R Isenovic

Glutathione "Redox Homeostasis" and Its Relation to Cardiovascular Disease.

Oxidative medicine and cellular longevity

Avec: Vladan P Bajic , Christophe Van Neste , Milan Obradovic , Sonja Zafirovic , Djordje Radak , Vladimir B Bajic , Magbubah Essack , Esma R Isenovic

DES-ROD: Exploring Literature to Develop New Links between RNA Oxidation and Human Diseases.

Oxidative medicine and cellular longevity

Avec: Magbubah Essack , Adil Salhi , Christophe Van Neste , Arwa Bin Raies , Faroug Tifratene , Mahmut Uludag , Arnaud Hungler , Bozidarka Zaric , Sonja Zafirovic , Takashi Gojobori , Esma Isenovic , Vladan P Bajic

Réseau de co-auteurs

Magbubah Essack 28 collaborations

Takashi Gojobori 15 collaborations

Vladimir B Bajic 13 collaborations

Xin Gao 12 collaborations

Esma R Isenovic 12 collaborations

Somayah Albaradei 8 collaborations

Mahmut Uludag 8 collaborations

Sonja Zafirovic 6 collaborations

Maha A Thafar 6 collaborations

Zoran Gluvic 6 collaborations

Christophe Van Neste 5 collaborations

Milan Obradovic 5 collaborations

Vladan P Bajic 4 collaborations

Mirjana T Macvanin 4 collaborations

Arwa Bin Raies 4 collaborations

Jelena Radovanovic 3 collaborations

Adil Salhi 3 collaborations

Faroug Tifratene 3 collaborations

Arnaud Hungler 3 collaborations

Lada Zivkovic 2 collaborations

Esma Isenovic 2 collaborations

Biljana Spremo-Potparevic 2 collaborations

Hind Alamro 2 collaborations

Julijana Stanimirovic 2 collaborations

Djordje Radak 2 collaborations

Olaa Motwalli 2 collaborations

Rawan S Olayan 2 collaborations

Alan J Stewart 2 collaborations

Mona Alshahrani 2 collaborations

Zoran M Gluvic 2 collaborations

Bozidarka L Zaric 2 collaborations

Maha Thafar 2 collaborations

Arturo Magana-Mora 2 collaborations

Boris R Jankovic 2 collaborations

G Othoum 1 collaboration

S Prigent 1 collaboration

A Derouiche 1 collaboration

L Shi 1 collaboration

A Bokhari 1 collaboration

S Alamoudi 1 collaboration

S Bougouffa 1 collaboration

X Gao 1 collaboration

R Hoehndorf 1 collaboration

S T Arold 1 collaboration

T Gojobori 1 collaboration

H Hirt 1 collaboration

F F Lafi 1 collaboration

J Nielsen 1 collaboration

V B Bajic 1 collaboration

I Mijakovic 1 collaboration

Alan Stewart 1 collaboration

Francesco Napolitano 1 collaboration

Ameerah Bokhari 1 collaboration

Feras F Lafi 1 collaboration

Cristina Andres-Barrao 1 collaboration

Rewaa Jalal 1 collaboration

Soha Alamoudi 1 collaboration

Rozaimi Razali 1 collaboration

Hanin Alzubaidy 1 collaboration

Kausar H Shah 1 collaboration

Shahid Siddique 1 collaboration

Heribert Hirt 1 collaboration

Maged M Saad 1 collaboration

Andreja Trpkovic 1 collaboration

Jelena Dimitrov 1 collaboration

Ivan Mijakovic 1 collaboration

Meshari Alazmi 1 collaboration

Haitham Ashoor 1 collaboration

Emina Sudar-Milovanovic 1 collaboration

Sanja Soskic 1 collaboration

Swati Arya 1 collaboration

Abdullah Almansour 1 collaboration

Asma Alkhaldi 1 collaboration

Robert Hoehndorf 1 collaboration

Katarina Banjac 1 collaboration

Nina Petrović 1 collaboration

Ahmad Šami 1 collaboration

George Perry 1 collaboration

Esma R Isenović 1 collaboration

Vladan P Bajić 1 collaboration

Vladimir S Samardzic 1 collaboration

Sonja S Zafirovic 1 collaboration

Milan M Obradovic 1 collaboration

Jasmina Grubin 1 collaboration

Mirjana Macvanin 1 collaboration

Milena Lackovic 1 collaboration

Vladimir Samardzic 1 collaboration

Jelena Tica Jevtic 1 collaboration

Fahad Albalawi 1 collaboration

Abderrazak Chahid 1 collaboration

Xingang Guo 1 collaboration

Taous-Meriem Laleg-Kirati 1 collaboration

Jelena N Radovanovic 1 collaboration

Ahdab AlSaieedi 1 collaboration

Bozidarka Zaric 1 collaboration