Mathieu Blanchette

Affiliations

School of Computer Science, McGill University, Montreal, Quebec H3A 0G4, Canada.

Publications (20)

EvoLSTM: context-dependent models of sequence evolution using a sequence-to-sequence LSTM.

Bioinformatics (Oxford, England)

Avec: Dongjoon Lim , Mathieu Blanchette

HIFI: estimating DNA-DNA interaction frequency from Hi-C data at restriction-fragment resolution.

Genome biology

Avec: Christopher Jf Cameron , Josée Dostie , Mathieu Blanchette

LAMPS: an analysis pipeline for sequence-specific ligation-mediated amplification reads.

BMC research notes

Avec: Christopher J F Cameron , Xue Q D Wang , Josée Dostie , Mathieu Blanchette

Large-scale mammalian genome rearrangements coincide with chromatin interactions.

Bioinformatics (Oxford, England)

Avec: Krister M Swenson , Mathieu Blanchette

Structural Variation Detection by Proximity Ligation from Formalin-Fixed, Paraffin-Embedded Tumor Tissue.

The Journal of molecular diagnostics : JMD

Avec: Christopher J Troll , Nicholas H Putnam , Paul D Hartley , Brandon Rice , Marco Blanchette , Sameed Siddiqui , Javkhlan-Ochir Ganbat , Martin P Powers , Ramesh Ramakrishnan , Christian A Kunder , Carlos D Bustamante , James L Zehnder , Richard E Green , Helio A Costa

2C-ChIP: measuring chromatin immunoprecipitation signal from defined genomic regions with deep sequencing.

BMC genomics

Avec: Xue Qing David Wang , Christopher J F Cameron , Denis Paquette , Dana Segal , Reid Warsaba , Mathieu Blanchette , Josée Dostie

What would have been the impacts of wetlands on low flow support and high flow attenuation under steady state land cover conditions?

Journal of environmental management

Avec: Marianne Blanchette , Alain N Rousseau , Étienne Foulon , Stéphane Savary , Monique Poulin

Reconstruction of full-length LINE-1 progenitors from ancestral genomes.

Genetics

Avec: Laura F Campitelli , Isaac Yellan , Mihai Albu , Marjan Barazandeh , Zain M Patel , Mathieu Blanchette , Timothy R Hughes

Association Between Characteristics of Danish Chiropractors and Number of Referred Patients From General Practitioners: A Cross-sectional Study.

Journal of manipulative and physiological therapeutics

Avec: Marc-André Blanchette , Nina Engmark , Mette Mouritsen Sørensen , Silvano Mior , Mette Jensen Stochkendahl

Tracing cancer evolution and heterogeneity using Hi-C.

Nature communications

Avec: Dan Daniel Erdmann-Pham , Sanjit Singh Batra , Timothy K Turkalo , James Durbin , Marco Blanchette , Iwei Yeh , Hunter Shain , Boris C Bastian , Yun S Song , Daniel S Rokhsar , Dirk Hockemeyer

K27M in canonical and noncanonical H3 variants occurs in distinct oligodendroglial cell lineages in brain midline gliomas.

Nature genetics

Avec: Selin Jessa , Abdulshakour Mohammadnia , Ashot S Harutyunyan , Maud Hulswit , Srinidhi Varadharajan , Hussein Lakkis , Nisha Kabir , Zahedeh Bashardanesh , Steven Hébert , Damien Faury , Maria C Vladoiu , Samantha Worme , Marie Coutelier , Brian Krug , Augusto Faria Andrade , Manav Pathania , Andrea Bajic , Alexander G Weil , Benjamin Ellezam , Jeffrey Atkinson , Roy W R Dudley , Jean-Pierre Farmer , Sebastien Perreault , Benjamin A Garcia , Valérie Larouche , Mathieu Blanchette , Livia Garzia , Aparna Bhaduri , Keith L Ligon , Pratiti Bandopadhayay , Michael D Taylor , Stephen C Mack , Nada Jabado , Claudia L Kleinman

Chiropractic pediatric patient management and interdisciplinary collaboration: a descriptive cross-sectional study of chiropractors in Quebec.

Chiropractic & manual therapies

Avec: Chantale Doucet , Élisa Dubuc , Camille Imbeau , Katherine A Pohlman , Marc-André Blanchette

Loss of epigenetic information as a cause of mammalian aging.

Cell

Avec: Jae-Hyun Yang , Motoshi Hayano , Patrick T Griffin , João A Amorim , Michael S Bonkowski , John K Apostolides , Elias L Salfati , Marco Blanchette , Elizabeth M Munding , Mital Bhakta , Yap Ching Chew , Wei Guo , Xiaojing Yang , Sun Maybury-Lewis , Xiao Tian , Jaime M Ross , Giuseppe Coppotelli , Margarita V Meer , Ryan Rogers-Hammond , Daniel L Vera , Yuancheng Ryan Lu , Jeffrey W Pippin , Michael L Creswell , Zhixun Dou , Caiyue Xu , Sarah J Mitchell , Abhirup Das , Brendan L O'Connell , Sachin Thakur , Alice E Kane , Qiao Su , Yasuaki Mohri , Emi K Nishimura , Laura Schaevitz , Neha Garg , Ana-Maria Balta , Meghan A Rego , Meredith Gregory-Ksander , Tatjana C Jakobs , Lei Zhong , Hiroko Wakimoto , Jihad El Andari , Dirk Grimm , Raul Mostoslavsky , Amy J Wagers , Kazuo Tsubota , Stephen J Bonasera , Carlos M Palmeira , Jonathan G Seidman , Christine E Seidman , Norman S Wolf , Jill A Kreiling , John M Sedivy , George F Murphy , Richard E Green , Benjamin A Garcia , Shelley L Berger , Philipp Oberdoerffer , Stuart J Shankland , Vadim N Gladyshev , Bruce R Ksander , Andreas R Pfenning , Luis A Rajman , David A Sinclair

Prognostic factors specific to work-related musculoskeletal disorders: An overview of recent systematic reviews.

Musculoskeletal science & practice

Avec: Yannick Tousignant-Laflamme , Catherine Houle , Christian Longtin , Thomas Gérard , Emilie Lagueux , Kadija Perreault , Hélène Beaudry , Pascal Tétreault , Marc-André Blanchette , Simon Décary

PERFUMES: Pipeline to extract RNA FUnctional motifs and exposed structures.

Bioinformatics (Oxford, England)

Avec: Arnaud Chol , Roman Sarrazin-Gendron , Éric Lécuyer , Mathieu Blanchette , Jérôme Waldispühl

TULIPs decorate the three-dimensional genome of PFA ependymoma.

Cell

Avec: Michael J Johnston , John J Y Lee , Bo Hu , Ana Nikolic , Elham Hasheminasabgorji , Audrey Baguette , Seungil Paik , Haifen Chen , Sachin Kumar , Carol C L Chen , Selin Jessa , Polina Balin , Vernon Fong , Melissa Zwaig , Kulandaimanuvel Antony Michealraj , Xun Chen , Yanlin Zhang , Srinidhi Varadharajan , Pierre Billon , Nikoleta Juretic , Craig Daniels , Amulya Nageswara Rao , Caterina Giannini , Eric M Thompson , Miklos Garami , Peter Hauser , Timea Pocza , Young Shin Ra , Byung-Kyu Cho , Seung-Ki Kim , Kyu-Chang Wang , Ji Yeoun Lee , Wieslawa Grajkowska , Marta Perek-Polnik , Sameer Agnihotri , Stephen Mack , Benjamin Ellezam , Alex Weil , Jeremy Rich , Guillaume Bourque , Jennifer A Chan , V Wee Yong , Mathieu Lupien , Jiannis Ragoussis , Claudia Kleinman , Jacek Majewski , Mathieu Blanchette , Nada Jabado , Michael D Taylor , Marco Gallo

Cardiac resynchronization therapy setting personalization utilizing noninvasive hemodynamics.

Heart & lung : the journal of critical care

Avec: Michael Blanchette

Prediction of mRNA subcellular localization using deep recurrent neural networks.

Bioinformatics (Oxford, England)

Avec: Zichao Yan , Eric Lécuyer , Mathieu Blanchette

A framework for value-creating learning health systems.

Health research policy and systems

Avec: Matthew Menear , Marc-André Blanchette , Olivier Demers-Payette , Denis Roy

Bioinformatics Approaches to Gain Insights into cis-Regulatory Motifs Involved in mRNA Localization.

Advances in experimental medicine and biology

Avec: Louis Philip Benoit Bouvrette , Mathieu Blanchette , Eric Lécuyer

Réseau de co-auteurs

Marc-André Blanchette 4 collaborations

Josée Dostie 3 collaborations

Marco Blanchette 3 collaborations

Christopher J F Cameron 2 collaborations

Richard E Green 2 collaborations

Selin Jessa 2 collaborations

Srinidhi Varadharajan 2 collaborations

Benjamin Ellezam 2 collaborations

Benjamin A Garcia 2 collaborations

Michael D Taylor 2 collaborations

Nada Jabado 2 collaborations

Eric Lécuyer 2 collaborations

Dongjoon Lim 1 collaboration

Christopher Jf Cameron 1 collaboration

Xue Q D Wang 1 collaboration

Krister M Swenson 1 collaboration

Christopher J Troll 1 collaboration

Nicholas H Putnam 1 collaboration

Paul D Hartley 1 collaboration

Brandon Rice 1 collaboration

Sameed Siddiqui 1 collaboration

Javkhlan-Ochir Ganbat 1 collaboration

Martin P Powers 1 collaboration

Ramesh Ramakrishnan 1 collaboration

Christian A Kunder 1 collaboration

Carlos D Bustamante 1 collaboration

James L Zehnder 1 collaboration

Helio A Costa 1 collaboration

Xue Qing David Wang 1 collaboration

Denis Paquette 1 collaboration

Dana Segal 1 collaboration

Reid Warsaba 1 collaboration

Marianne Blanchette 1 collaboration

Alain N Rousseau 1 collaboration

Étienne Foulon 1 collaboration

Stéphane Savary 1 collaboration

Monique Poulin 1 collaboration

Laura F Campitelli 1 collaboration

Isaac Yellan 1 collaboration

Mihai Albu 1 collaboration

Marjan Barazandeh 1 collaboration

Zain M Patel 1 collaboration

Timothy R Hughes 1 collaboration

Nina Engmark 1 collaboration

Mette Mouritsen Sørensen 1 collaboration

Silvano Mior 1 collaboration

Mette Jensen Stochkendahl 1 collaboration

Dan Daniel Erdmann-Pham 1 collaboration

Sanjit Singh Batra 1 collaboration

Timothy K Turkalo 1 collaboration

James Durbin 1 collaboration

Iwei Yeh 1 collaboration

Hunter Shain 1 collaboration

Boris C Bastian 1 collaboration

Yun S Song 1 collaboration

Daniel S Rokhsar 1 collaboration

Dirk Hockemeyer 1 collaboration

Abdulshakour Mohammadnia 1 collaboration

Ashot S Harutyunyan 1 collaboration

Maud Hulswit 1 collaboration

Hussein Lakkis 1 collaboration

Nisha Kabir 1 collaboration

Zahedeh Bashardanesh 1 collaboration

Steven Hébert 1 collaboration

Damien Faury 1 collaboration

Maria C Vladoiu 1 collaboration

Samantha Worme 1 collaboration

Marie Coutelier 1 collaboration

Brian Krug 1 collaboration

Augusto Faria Andrade 1 collaboration

Manav Pathania 1 collaboration

Andrea Bajic 1 collaboration

Alexander G Weil 1 collaboration

Jeffrey Atkinson 1 collaboration

Roy W R Dudley 1 collaboration

Jean-Pierre Farmer 1 collaboration

Sebastien Perreault 1 collaboration

Valérie Larouche 1 collaboration

Livia Garzia 1 collaboration

Aparna Bhaduri 1 collaboration

Keith L Ligon 1 collaboration

Pratiti Bandopadhayay 1 collaboration

Stephen C Mack 1 collaboration

Claudia L Kleinman 1 collaboration

Chantale Doucet 1 collaboration

Élisa Dubuc 1 collaboration

Camille Imbeau 1 collaboration

Katherine A Pohlman 1 collaboration

Jae-Hyun Yang 1 collaboration

Motoshi Hayano 1 collaboration

Patrick T Griffin 1 collaboration

João A Amorim 1 collaboration

Michael S Bonkowski 1 collaboration

John K Apostolides 1 collaboration

Elias L Salfati 1 collaboration

Elizabeth M Munding 1 collaboration

Mital Bhakta 1 collaboration

Yap Ching Chew 1 collaboration

Wei Guo 1 collaboration

Xiaojing Yang 1 collaboration

Sun Maybury-Lewis 1 collaboration

Xiao Tian 1 collaboration

Jaime M Ross 1 collaboration

Giuseppe Coppotelli 1 collaboration

Margarita V Meer 1 collaboration

Ryan Rogers-Hammond 1 collaboration

Daniel L Vera 1 collaboration

Yuancheng Ryan Lu 1 collaboration

Jeffrey W Pippin 1 collaboration

Michael L Creswell 1 collaboration

Zhixun Dou 1 collaboration

Caiyue Xu 1 collaboration

Sarah J Mitchell 1 collaboration

Abhirup Das 1 collaboration

Brendan L O'Connell 1 collaboration

Sachin Thakur 1 collaboration

Alice E Kane 1 collaboration

Qiao Su 1 collaboration

Yasuaki Mohri 1 collaboration

Emi K Nishimura 1 collaboration

Laura Schaevitz 1 collaboration

Neha Garg 1 collaboration

Ana-Maria Balta 1 collaboration

Meghan A Rego 1 collaboration

Meredith Gregory-Ksander 1 collaboration

Tatjana C Jakobs 1 collaboration

Lei Zhong 1 collaboration

Hiroko Wakimoto 1 collaboration

Jihad El Andari 1 collaboration

Dirk Grimm 1 collaboration

Raul Mostoslavsky 1 collaboration

Amy J Wagers 1 collaboration

Kazuo Tsubota 1 collaboration

Stephen J Bonasera 1 collaboration

Carlos M Palmeira 1 collaboration

Jonathan G Seidman 1 collaboration

Christine E Seidman 1 collaboration

Norman S Wolf 1 collaboration

Jill A Kreiling 1 collaboration

John M Sedivy 1 collaboration

George F Murphy 1 collaboration

Shelley L Berger 1 collaboration

Philipp Oberdoerffer 1 collaboration

Stuart J Shankland 1 collaboration

Vadim N Gladyshev 1 collaboration

Bruce R Ksander 1 collaboration

Andreas R Pfenning 1 collaboration

Luis A Rajman 1 collaboration

David A Sinclair 1 collaboration

Yannick Tousignant-Laflamme 1 collaboration

Catherine Houle 1 collaboration

Christian Longtin 1 collaboration

Thomas Gérard 1 collaboration

Emilie Lagueux 1 collaboration

Kadija Perreault 1 collaboration

Hélène Beaudry 1 collaboration

Pascal Tétreault 1 collaboration

Simon Décary 1 collaboration

Arnaud Chol 1 collaboration

Roman Sarrazin-Gendron 1 collaboration

Éric Lécuyer 1 collaboration

Jérôme Waldispühl 1 collaboration

Michael J Johnston 1 collaboration

John J Y Lee 1 collaboration

Bo Hu 1 collaboration

Ana Nikolic 1 collaboration

Elham Hasheminasabgorji 1 collaboration

Audrey Baguette 1 collaboration

Seungil Paik 1 collaboration

Haifen Chen 1 collaboration

Sachin Kumar 1 collaboration

Carol C L Chen 1 collaboration

Polina Balin 1 collaboration

Vernon Fong 1 collaboration

Melissa Zwaig 1 collaboration

Kulandaimanuvel Antony Michealraj 1 collaboration

Xun Chen 1 collaboration

Yanlin Zhang 1 collaboration

Pierre Billon 1 collaboration

Nikoleta Juretic 1 collaboration

Craig Daniels 1 collaboration

Amulya Nageswara Rao 1 collaboration

Caterina Giannini 1 collaboration

Eric M Thompson 1 collaboration

Miklos Garami 1 collaboration

Peter Hauser 1 collaboration

Timea Pocza 1 collaboration

Young Shin Ra 1 collaboration

Byung-Kyu Cho 1 collaboration

Seung-Ki Kim 1 collaboration

Kyu-Chang Wang 1 collaboration

Ji Yeoun Lee 1 collaboration

Wieslawa Grajkowska 1 collaboration

Marta Perek-Polnik 1 collaboration

Sameer Agnihotri 1 collaboration

Stephen Mack 1 collaboration

Alex Weil 1 collaboration

Jeremy Rich 1 collaboration

Guillaume Bourque 1 collaboration

Jennifer A Chan 1 collaboration

V Wee Yong 1 collaboration

Mathieu Lupien 1 collaboration

Jiannis Ragoussis 1 collaboration

Claudia Kleinman 1 collaboration

Jacek Majewski 1 collaboration

Marco Gallo 1 collaboration

Michael Blanchette 1 collaboration

Zichao Yan 1 collaboration

Matthew Menear 1 collaboration

Olivier Demers-Payette 1 collaboration

Denis Roy 1 collaboration

Louis Philip Benoit Bouvrette 1 collaboration