Matthieu Defrance

Affiliations

Université Libre de Bruxelles, Interuniversity Institute of Bioinformatics in Brussels (IB2), Brussels, 1050, Belgium.

ORCID: http://orcid.org/0000-0002-3090-3142

Publications (25)

EOMES interacts with RUNX3 and BRG1 to promote innate memory cell formation through epigenetic reprogramming.

Nature communications

Avec: Nicolas Istaces , Marion Splittgerber , Viviana Lima Silva , Muriel Nguyen , Séverine Thomas , Aurore Le , Younes Achouri , Emilie Calonne , Matthieu Defrance , François Fuks , Stanislas Goriely , Abdulkader Azouz

Determination of drug efficacy to dissolve cobalt oxide particles in cellular models: Towards a therapeutic approach to decrease pulmonary retention.

Toxicology in vitro : an international journal published in association with BIBRA

Avec: Anne Van der Meeren , Karine Devilliers , Sylvie Coudert , Agnès Moureau , Martine Defrance , Catherine Berthomieu , Véronique Malard

Identification of differentially methylated regions in rare diseases from a single-patient perspective.

Clinical epigenetics

Avec: Robin Grolaux , Alexis Hardy , Catharina Olsen , Sonia Van Dooren , Guillaume Smits , Matthieu Defrance

USP7/Maged1-mediated H2A monoubiquitination in the paraventricular thalamus: an epigenetic mechanism involved in cocaine use disorder.

Nature communications

Avec: Julian Cheron , Leonardo Beccari , Perrine Hagué , Romain Icick , Chloé Despontin , Teresa Carusone , Matthieu Defrance , Sagar Bhogaraju , Elena Martin-Garcia , Roberto Capellan , Rafael Maldonado , Florence Vorspan , Jérôme Bonnefont , Alban de Kerchove d'Exaerde

Retinal endothelial cell phenotypic modifications during experimental autoimmune uveitis: a transcriptomic approach.

BMC ophthalmology

Avec: Deborah A Lipski , Vincent Foucart , Rémi Dewispelaere , Laure E Caspers , Matthieu Defrance , Catherine Bruyns , François Willermain

GNN-based embedding for clustering scRNA-seq data.

Bioinformatics (Oxford, England)

Avec: Madalina Ciortan , Matthieu Defrance

Exploiting Genomic Features to Improve the Prediction of Transcription Factor-Binding Sites in Plants.

Plant & cell physiology

Avec: Quentin Rivière , Massimiliano Corso , Madalina Ciortan , Grégoire Noël , Nathalie Verbruggen , Matthieu Defrance

DNA Modification Patterns Filtering and Analysis Using DNAModAnnot.

Methods in molecular biology (Clifton, N.J.)

Avec: Alexis Hardy , Sandra Duharcourt , Matthieu Defrance

RedRibbon: A new rank-rank hypergeometric overlap for gene and transcript expression signatures.

Life science alliance

Avec: Anthony Piron , Florian Szymczak , Theodora Papadopoulou , Maria Inês Alvelos , Matthieu Defrance , Tom Lenaerts , Décio L Eizirik , Miriam Cnop

Decontamination of Actinide-contaminated Injured Skin with Ca-DTPA Products Using an Ex Vivo Rat Skin Model.

Health physics

Avec: Anne Van der Meeren , Karine Devilliers , Nina Griffiths , Anne-Sophie Chaplault , Martine Defrance , Gaëtan Ducouret , Michaël Pasteur , Pierre Laroche , François Caire-Maurisier

TIGER: The gene expression regulatory variation landscape of human pancreatic islets.

Cell reports

Avec: Lorena Alonso , Anthony Piron , Ignasi Morán , Marta Guindo-Martínez , Sílvia Bonàs-Guarch , Goutham Atla , Irene Miguel-Escalada , Romina Royo , Montserrat Puiggròs , Xavier Garcia-Hurtado , Mara Suleiman , Lorella Marselli , Jonathan L S Esguerra , Jean-Valéry Turatsinze , Jason M Torres , Vibe Nylander , Ji Chen , Lena Eliasson , Matthieu Defrance , Ramon Amela , Auteur inconnu , Hindrik Mulder , Anna L Gloyn , Leif Groop , Piero Marchetti , Decio L Eizirik , Jorge Ferrer , Josep M Mercader , Miriam Cnop , David Torrents

DNAModAnnot: a R toolbox for DNA modification filtering and annotation.

Bioinformatics (Oxford, England)

Avec: Alexis Hardy , Mélody Matelot , Amandine Touzeau , Christophe Klopp , Céline Lopez-Roques , Sandra Duharcourt , Matthieu Defrance

Use of an Acellular Assay to Study Interactions between Actinides and Biological or Synthetic Ligands.

Biomolecules

Avec: Anne Van der Meeren , Catherine Berthomieu , Agnès Moureau , Martine Defrance , Nina M Griffiths

Circulating unmethylated CHTOP and INS DNA fragments provide evidence of possible islet cell death in youth with obesity and diabetes.

Clinical epigenetics

Avec: Farooq Syed , Sarah A Tersey , Jean-Valery Turatsinze , Jamie L Felton , Nicole Jiyun Kang , Jennifer B Nelson , Emily K Sims , Mathieu Defrance , Martin Bizet , Francois Fuks , Miriam Cnop , Marco Bugliani , Piero Marchetti , Anette-Gabriele Ziegler , Ezio Bonifacio , Bobbie-Jo Webb-Robertson , Appakalai N Balamurugan , Carmella Evans-Molina , Decio L Eizirik , Kieren J Mather , Silva Arslanian , Raghavendra G Mirmira

Combining single-cell RNA-sequencing with a molecular atlas unveils new markers for Caenorhabditis elegans neuron classes.

Nucleic acids research

Avec: Ramiro Lorenzo , Michiho Onizuka , Matthieu Defrance , Patrick Laurent

Impact of COVID-19 Lockdown on Preterm Births, Low Birthweights and Stillbirths: A Retrospective Cohort Study.

Journal of clinical medicine

Avec: Charles Garabedian , Ninon Dupuis , Christophe Vayssière , Laurence Bussières , Yves Ville , Benoît Renaudin , Louise Dugave , Norbert Winer , Nathalie Banaszkiewicz , Patrick Rozenberg , Manon Defrance , Marie-Laure Legris , Thibaud Quibel , Philippe Deruelle

Contrastive self-supervised clustering of scRNA-seq data.

BMC bioinformatics

Avec: Madalina Ciortan , Matthieu Defrance

Molecular adaptations to heat stress in the thermophilic ant genus Cataglyphis.

Molecular ecology

Avec: Rémy Perez , Natalia de Souza Araujo , Matthieu Defrance , Serge Aron

Improving Infinium MethylationEPIC data processing: re-annotation of enhancers and long noncoding RNA genes and benchmarking of normalization methods.

Epigenetics

Avec: Martin Bizet , Matthieu Defrance , Emilie Calonne , Gianluca Bontempi , Christos Sotiriou , François Fuks , Jana Jeschke

Take a Swipe at Actinide Bioavailability: Application of a New In Vitro Method.

Health physics

Avec: N M Griffiths , A Moureau , S Coudert , F Huet , M Defrance , A Van der Meeren

Distinct mesoderm migration phenotypes in extra-embryonic and embryonic regions of the early mouse embryo.

eLife

Avec: Bechara Saykali , Navrita Mathiah , Wallis Nahaboo , Marie-Lucie Racu , Latifa Hammou , Matthieu Defrance , Isabelle Migeotte

Impact of COVID-19-Related Lockdown on Delivery and Perinatal Outcomes: A Retrospective Cohort Study.

Journal of clinical medicine

Avec: Thibaud Quibel , Norbert Winer , Laurence Bussières , Christophe Vayssière , Philippe Deruelle , Manon Defrance , Patrick Rozenberg , Jean Bouyer , Ninon Dupuis , Benoit Renaudin , Louise Dugave , Nathalie Banaszkiewicz , Charles Garabedian , Yves Ville

Facing lethal temperatures: Heat-shock response in desert and temperate ants.

Ecology and evolution

Avec: Natalia de Souza Araujo , Rémy Perez , Quentin Willot , Matthieu Defrance , Serge Aron

Physicians' perceptions of the daily use of a handheld ultrasound device in the labor room.

Journal of gynecology obstetrics and human reproduction

Avec: Romain Corroenne , Marion Chesnais , Chelsea Khawand , Isabelle Attali , Anne Sophie Boucherie , Manon Defrance , Rosemary Morgan , Louise Maurey , Yves Ville , Laurent J Salomon

Comprehensive evaluation of the implementation of episignatures for diagnosis of neurodevelopmental disorders (NDDs).

Human genetics

Avec: Edoardo Giuili , Robin Grolaux , Catarina Z N M Macedo , Laurence Desmyter , Bruno Pichon , Sebastian Neuens , Catheline Vilain , Catharina Olsen , Sonia Van Dooren , Guillaume Smits , Matthieu Defrance

Réseau de co-auteurs

Anne Van der Meeren 3 collaborations

Martine Defrance 3 collaborations

Alexis Hardy 3 collaborations

Madalina Ciortan 3 collaborations

Miriam Cnop 3 collaborations

Yves Ville 3 collaborations

Manon Defrance 3 collaborations

Emilie Calonne 2 collaborations

François Fuks 2 collaborations

Karine Devilliers 2 collaborations

Agnès Moureau 2 collaborations

Catherine Berthomieu 2 collaborations

Robin Grolaux 2 collaborations

Catharina Olsen 2 collaborations

Sonia Van Dooren 2 collaborations

Guillaume Smits 2 collaborations

Sandra Duharcourt 2 collaborations

Anthony Piron 2 collaborations

Piero Marchetti 2 collaborations

Decio L Eizirik 2 collaborations

Martin Bizet 2 collaborations

Charles Garabedian 2 collaborations

Ninon Dupuis 2 collaborations

Christophe Vayssière 2 collaborations

Laurence Bussières 2 collaborations

Louise Dugave 2 collaborations

Norbert Winer 2 collaborations

Nathalie Banaszkiewicz 2 collaborations

Patrick Rozenberg 2 collaborations

Thibaud Quibel 2 collaborations

Philippe Deruelle 2 collaborations

Rémy Perez 2 collaborations

Natalia de Souza Araujo 2 collaborations

Serge Aron 2 collaborations

Nicolas Istaces 1 collaboration

Marion Splittgerber 1 collaboration

Viviana Lima Silva 1 collaboration

Muriel Nguyen 1 collaboration

Séverine Thomas 1 collaboration

Aurore Le 1 collaboration

Younes Achouri 1 collaboration

Stanislas Goriely 1 collaboration

Abdulkader Azouz 1 collaboration

Sylvie Coudert 1 collaboration

Véronique Malard 1 collaboration

Julian Cheron 1 collaboration

Leonardo Beccari 1 collaboration

Perrine Hagué 1 collaboration

Romain Icick 1 collaboration

Chloé Despontin 1 collaboration

Teresa Carusone 1 collaboration

Sagar Bhogaraju 1 collaboration

Elena Martin-Garcia 1 collaboration

Roberto Capellan 1 collaboration

Rafael Maldonado 1 collaboration

Florence Vorspan 1 collaboration

Jérôme Bonnefont 1 collaboration

Alban de Kerchove d'Exaerde 1 collaboration

Deborah A Lipski 1 collaboration

Vincent Foucart 1 collaboration

Rémi Dewispelaere 1 collaboration

Laure E Caspers 1 collaboration

Catherine Bruyns 1 collaboration

François Willermain 1 collaboration

Quentin Rivière 1 collaboration

Massimiliano Corso 1 collaboration

Grégoire Noël 1 collaboration

Nathalie Verbruggen 1 collaboration

Florian Szymczak 1 collaboration

Theodora Papadopoulou 1 collaboration

Maria Inês Alvelos 1 collaboration

Tom Lenaerts 1 collaboration

Décio L Eizirik 1 collaboration

Nina Griffiths 1 collaboration

Anne-Sophie Chaplault 1 collaboration

Gaëtan Ducouret 1 collaboration

Michaël Pasteur 1 collaboration

Pierre Laroche 1 collaboration

François Caire-Maurisier 1 collaboration

Lorena Alonso 1 collaboration

Ignasi Morán 1 collaboration

Marta Guindo-Martínez 1 collaboration

Sílvia Bonàs-Guarch 1 collaboration

Goutham Atla 1 collaboration

Irene Miguel-Escalada 1 collaboration

Romina Royo 1 collaboration

Montserrat Puiggròs 1 collaboration

Xavier Garcia-Hurtado 1 collaboration

Mara Suleiman 1 collaboration

Lorella Marselli 1 collaboration

Jonathan L S Esguerra 1 collaboration

Jean-Valéry Turatsinze 1 collaboration

Jason M Torres 1 collaboration

Vibe Nylander 1 collaboration

Ji Chen 1 collaboration

Lena Eliasson 1 collaboration

Ramon Amela 1 collaboration

None None 1 collaboration

Hindrik Mulder 1 collaboration

Anna L Gloyn 1 collaboration

Leif Groop 1 collaboration

Jorge Ferrer 1 collaboration

Josep M Mercader 1 collaboration

David Torrents 1 collaboration

Mélody Matelot 1 collaboration

Amandine Touzeau 1 collaboration

Christophe Klopp 1 collaboration

Céline Lopez-Roques 1 collaboration

Nina M Griffiths 1 collaboration

Farooq Syed 1 collaboration

Sarah A Tersey 1 collaboration

Jean-Valery Turatsinze 1 collaboration

Jamie L Felton 1 collaboration

Nicole Jiyun Kang 1 collaboration

Jennifer B Nelson 1 collaboration

Emily K Sims 1 collaboration

Mathieu Defrance 1 collaboration

Francois Fuks 1 collaboration

Marco Bugliani 1 collaboration

Anette-Gabriele Ziegler 1 collaboration

Ezio Bonifacio 1 collaboration

Bobbie-Jo Webb-Robertson 1 collaboration

Appakalai N Balamurugan 1 collaboration

Carmella Evans-Molina 1 collaboration

Kieren J Mather 1 collaboration

Silva Arslanian 1 collaboration

Raghavendra G Mirmira 1 collaboration

Ramiro Lorenzo 1 collaboration

Michiho Onizuka 1 collaboration

Patrick Laurent 1 collaboration

Benoît Renaudin 1 collaboration

Marie-Laure Legris 1 collaboration

Gianluca Bontempi 1 collaboration

Christos Sotiriou 1 collaboration

Jana Jeschke 1 collaboration

N M Griffiths 1 collaboration

A Moureau 1 collaboration

S Coudert 1 collaboration

F Huet 1 collaboration

M Defrance 1 collaboration

A Van der Meeren 1 collaboration

Bechara Saykali 1 collaboration

Navrita Mathiah 1 collaboration

Wallis Nahaboo 1 collaboration

Marie-Lucie Racu 1 collaboration

Latifa Hammou 1 collaboration

Isabelle Migeotte 1 collaboration

Jean Bouyer 1 collaboration

Benoit Renaudin 1 collaboration

Quentin Willot 1 collaboration

Romain Corroenne 1 collaboration

Marion Chesnais 1 collaboration

Chelsea Khawand 1 collaboration

Isabelle Attali 1 collaboration

Anne Sophie Boucherie 1 collaboration

Rosemary Morgan 1 collaboration

Louise Maurey 1 collaboration

Laurent J Salomon 1 collaboration

Edoardo Giuili 1 collaboration

Catarina Z N M Macedo 1 collaboration

Laurence Desmyter 1 collaboration

Bruno Pichon 1 collaboration

Sebastian Neuens 1 collaboration

Catheline Vilain 1 collaboration