Michael Prummer

Affiliations

ETH Zurich, NEXUS Personalized Health Technologies, Zurich, Switzerland.
SIB Swiss Institute of Bioinformatics, Zurich, Switzerland.

ORCID: 0000-0001-9896-3929

Publications (13)

scAmpi-A versatile pipeline for single-cell RNA-seq analysis from basics to clinics.

PLoS computational biology

Avec: Anne Bertolini , Michael Prummer , Mustafa Anil Tuncel , Ulrike Menzel , María Lourdes Rosano-González , Jack Kuipers , Daniel Johannes Stekhoven , Auteur inconnu , Niko Beerenwinkel , Franziska Singer

External validation of the MiGUTS nomogram for the prediction of bleeding control intervention after renal trauma.

World journal of urology

Avec: Tobias Simon Schmidli , Silvan Sigg , Sorena Keihani , Lars Bosshard , Michael Prummer , Anna S Nowag , Jan Birzele , Chong Zhang , Jeremy B Myers , Räto T Strebel

The Tumor Profiler Study: integrated, multi-omic, functional tumor profiling for clinical decision support.

Cancer cell

Avec: Anja Irmisch , Ximena Bonilla , Stéphane Chevrier , Kjong-Van Lehmann , Franziska Singer , Nora C Toussaint , Cinzia Esposito , Julien Mena , Emanuela S Milani , Ruben Casanova , Daniel J Stekhoven , Rebekka Wegmann , Francis Jacob , Bettina Sobottka , Sandra Goetze , Jack Kuipers , Jacobo Sarabia Del Castillo , Michael Prummer , Mustafa A Tuncel , Ulrike Menzel , Andrea Jacobs , Stefanie Engler , Sujana Sivapatham , Anja L Frei , Gabriele Gut , Joanna Ficek , Nicola Miglino , Auteur inconnu , Rudolf Aebersold , Marina Bacac , Niko Beerenwinkel , Christian Beisel , Bernd Bodenmiller , Reinhard Dummer , Viola Heinzelmann-Schwarz , Viktor H Koelzer , Markus G Manz , Holger Moch , Lucas Pelkmans , Berend Snijder , Alexandre P A Theocharides , Markus Tolnay , Andreas Wicki , Bernd Wollscheid , Gunnar Rätsch , Mitchell P Levesque

Can Dynamic Contrast-enhanced MRI Contribute to Improved Assessment of Rectosigmoid Involvement in Deep Infiltrating Endometriosis?

In vivo (Athens, Greece)

Avec: Daniel Hausmann , Vasiliki Perignon , Regula Grabherr , Elisabeth Weiland , Marcel Dominik Nickel , Maurus Murer , Lars Bosshard , Michael Prummer , Rahel A Kubik-Huch

Machine learning-powered antibiotics phenotypic drug discovery.

Scientific reports

Avec: Sannah Zoffmann , Maarten Vercruysse , Fethallah Benmansour , Andreas Maunz , Luise Wolf , Rita Blum Marti , Tobias Heckel , Haiyuan Ding , Hoa Hue Truong , Michael Prummer , Roland Schmucki , Clive S Mason , Kenneth Bradley , Asha Ivy Jacob , Christian Lerner , Andrea Araujo Del Rosario , Mark Burcin , Kurt E Amrein , Marco Prunotto

Enhancing gene set enrichment using networks.

F1000Research

Avec: Michael Prummer

Advanced Diffusion-Weighted Imaging Sequences for Breast MRI: Comprehensive Comparison of Improved Sequences and Ultra-High B-Values to Identify the Optimal Combination.

Diagnostics (Basel, Switzerland)

Avec: Daniel Hausmann , Inga Todorski , Alexandra Pindur , Elisabeth Weiland , Thomas Benkert , Lars Bosshard , Michael Prummer , Rahel A Kubik-Huch

Correction: Immunosuppressive FK506 treatment leads to more frequent EBV-associated lymphoproliferative disease in humanized mice.

PLoS pathogens

Avec: Nicole Caduff , Donal McHugh , Anita Murer , Patrick Rämer , Ana Raykova , Vanessa Landtwing , Lisa Rieble , Christian W Keller , Michael Prummer , Laurent Hoffmann , Janice K P Lam , Alan K S Chiang , Friedrich Raulf , Tarik Azzi , Christoph Berger , Tina Rubic-Schneider , Elisabetta Traggiai , Jan D Lünemann , Michael Kammüller , Christian Münz

Immunosuppressive FK506 treatment leads to more frequent EBV-associated lymphoproliferative disease in humanized mice.

PLoS pathogens

Avec: Nicole Caduff , Donal McHugh , Anita Murer , Patrick Rämer , Ana Raykova , Vanessa Landtwing , Lisa Rieble , Christian W Keller , Michael Prummer , Laurent Hoffmann , Janice K P Lam , Alan K S Chiang , Friedrich Raulf , Tarik Azzi , Christoph Berger , Tina Rubic-Schneider , Elisabetta Traggiai , Jan D Lünemann , Michael Kammüller , Christian Münz

A novel anti-HER2 anthracycline-based antibody-drug conjugate induces adaptive anti-tumor immunity and potentiates PD-1 blockade in breast cancer.

Journal for immunotherapy of cancer

Avec: Lucia D'Amico , Ulrike Menzel , Michael Prummer , Philipp Müller , Mélanie Buchi , Abhishek Kashyap , Ulrike Haessler , Alexander Yermanos , Rémy Gébleux , Manfred Briendl , Tamara Hell , Fabian I Wolter , Roger R Beerli , Iva Truxova , Špíšek Radek , Tatjana Vlajnic , Ulf Grawunder , Sai Reddy , Alfred Zippelius

Quantitative Assessment of Iteratively Denoised 3D SPACE with Inner-Volume Excitation and Simultaneous Multi-Slice BLADE for Optimizing Female Pelvis Magnetic Resonance Imaging at 1.5 T.

Academic radiology

Avec: Daniel Hausmann , Alexandra Pindur , Inga Todorski , Elisabeth Weiland , Bernd Kuehn , Kun Zhou , Lars Bosshard , Michael Prummer , Rahel A Kubik-Huch

scROSHI: robust supervised hierarchical identification of single cells.

NAR genomics and bioinformatics

Avec: Michael Prummer , Anne Bertolini , Lars Bosshard , Florian Barkmann , Josephine Yates , Valentina Boeva , Auteur inconnu , Daniel Stekhoven , Franziska Singer

Single-cell landscape of innate and acquired drug resistance in acute myeloid leukemia.

Nature communications

Avec: Rebekka Wegmann , Ximena Bonilla , Ruben Casanova , Stéphane Chevrier , Ricardo Coelho , Cinzia Esposito , Joanna Ficek-Pascual , Sandra Goetze , Gabriele Gut , Francis Jacob , Andrea Jacobs , Jack Kuipers , Ulrike Lischetti , Julien Mena , Emanuela S Milani , Michael Prummer , Jacobo Sarabia Del Castillo , Franziska Singer , Sujana Sivapatham , Nora C Toussaint , Oliver Vilinovszki , Mattheus H E Wildschut , Tharshika Thavayogarajah , Disha Malani , Auteur inconnu , Rudolf Aebersold , Marina Bacac , Niko Beerenwinkel , Christian Beisel , Bernd Bodenmiller , Viola Heinzelmann-Schwarz , Viktor H Koelzer , Mitchell P Levesque , Holger Moch , Lucas Pelkmans , Gunnar Rätsch , Markus Tolnay , Andreas Wicki , Bernd Wollscheid , Markus G Manz , Berend Snijder , Alexandre P A Theocharides

Réseau de co-auteurs

Lars Bosshard 5 collaborations

None None 4 collaborations

Franziska Singer 4 collaborations

Ulrike Menzel 3 collaborations

Jack Kuipers 3 collaborations

Niko Beerenwinkel 3 collaborations

Daniel Hausmann 3 collaborations

Elisabeth Weiland 3 collaborations

Rahel A Kubik-Huch 3 collaborations

Anne Bertolini 2 collaborations

Ximena Bonilla 2 collaborations

Stéphane Chevrier 2 collaborations

Nora C Toussaint 2 collaborations

Cinzia Esposito 2 collaborations

Julien Mena 2 collaborations

Emanuela S Milani 2 collaborations

Ruben Casanova 2 collaborations

Rebekka Wegmann 2 collaborations

Francis Jacob 2 collaborations

Sandra Goetze 2 collaborations

Jacobo Sarabia Del Castillo 2 collaborations

Andrea Jacobs 2 collaborations

Sujana Sivapatham 2 collaborations

Gabriele Gut 2 collaborations

Rudolf Aebersold 2 collaborations

Marina Bacac 2 collaborations

Christian Beisel 2 collaborations

Bernd Bodenmiller 2 collaborations

Viola Heinzelmann-Schwarz 2 collaborations

Viktor H Koelzer 2 collaborations

Markus G Manz 2 collaborations

Holger Moch 2 collaborations

Lucas Pelkmans 2 collaborations

Berend Snijder 2 collaborations

Alexandre P A Theocharides 2 collaborations

Markus Tolnay 2 collaborations

Andreas Wicki 2 collaborations

Bernd Wollscheid 2 collaborations

Gunnar Rätsch 2 collaborations

Mitchell P Levesque 2 collaborations

Inga Todorski 2 collaborations

Alexandra Pindur 2 collaborations

Nicole Caduff 2 collaborations

Donal McHugh 2 collaborations

Anita Murer 2 collaborations

Patrick Rämer 2 collaborations

Ana Raykova 2 collaborations

Vanessa Landtwing 2 collaborations

Lisa Rieble 2 collaborations

Christian W Keller 2 collaborations

Laurent Hoffmann 2 collaborations

Janice K P Lam 2 collaborations

Alan K S Chiang 2 collaborations

Friedrich Raulf 2 collaborations

Tarik Azzi 2 collaborations

Christoph Berger 2 collaborations

Tina Rubic-Schneider 2 collaborations

Elisabetta Traggiai 2 collaborations

Jan D Lünemann 2 collaborations

Michael Kammüller 2 collaborations

Christian Münz 2 collaborations

Mustafa Anil Tuncel 1 collaboration

María Lourdes Rosano-González 1 collaboration

Daniel Johannes Stekhoven 1 collaboration

Tobias Simon Schmidli 1 collaboration

Silvan Sigg 1 collaboration

Sorena Keihani 1 collaboration

Anna S Nowag 1 collaboration

Jan Birzele 1 collaboration

Chong Zhang 1 collaboration

Jeremy B Myers 1 collaboration

Räto T Strebel 1 collaboration

Anja Irmisch 1 collaboration

Kjong-Van Lehmann 1 collaboration

Daniel J Stekhoven 1 collaboration

Bettina Sobottka 1 collaboration

Mustafa A Tuncel 1 collaboration

Stefanie Engler 1 collaboration

Anja L Frei 1 collaboration

Joanna Ficek 1 collaboration

Nicola Miglino 1 collaboration

Reinhard Dummer 1 collaboration

Vasiliki Perignon 1 collaboration

Regula Grabherr 1 collaboration

Marcel Dominik Nickel 1 collaboration

Maurus Murer 1 collaboration

Sannah Zoffmann 1 collaboration

Maarten Vercruysse 1 collaboration

Fethallah Benmansour 1 collaboration

Andreas Maunz 1 collaboration

Luise Wolf 1 collaboration

Rita Blum Marti 1 collaboration

Tobias Heckel 1 collaboration

Haiyuan Ding 1 collaboration

Hoa Hue Truong 1 collaboration

Roland Schmucki 1 collaboration

Clive S Mason 1 collaboration

Kenneth Bradley 1 collaboration

Asha Ivy Jacob 1 collaboration

Christian Lerner 1 collaboration

Andrea Araujo Del Rosario 1 collaboration

Mark Burcin 1 collaboration

Kurt E Amrein 1 collaboration

Marco Prunotto 1 collaboration

Thomas Benkert 1 collaboration

Lucia D'Amico 1 collaboration

Philipp Müller 1 collaboration

Mélanie Buchi 1 collaboration

Abhishek Kashyap 1 collaboration

Ulrike Haessler 1 collaboration

Alexander Yermanos 1 collaboration

Rémy Gébleux 1 collaboration

Manfred Briendl 1 collaboration

Tamara Hell 1 collaboration

Fabian I Wolter 1 collaboration

Roger R Beerli 1 collaboration

Iva Truxova 1 collaboration

Špíšek Radek 1 collaboration

Tatjana Vlajnic 1 collaboration

Ulf Grawunder 1 collaboration

Sai Reddy 1 collaboration

Alfred Zippelius 1 collaboration

Bernd Kuehn 1 collaboration

Kun Zhou 1 collaboration

Florian Barkmann 1 collaboration

Josephine Yates 1 collaboration

Valentina Boeva 1 collaboration

Daniel Stekhoven 1 collaboration

Ricardo Coelho 1 collaboration

Joanna Ficek-Pascual 1 collaboration

Ulrike Lischetti 1 collaboration

Oliver Vilinovszki 1 collaboration

Mattheus H E Wildschut 1 collaboration

Tharshika Thavayogarajah 1 collaboration

Disha Malani 1 collaboration