V Addala

Affiliations

Cancer Program, QIMR Berghofer Medical Research Institute, Brisbane, Australia.

Publications (12)

Comparison of actionable events detected in cancer genomes by whole-genome sequencing, in silico whole-exome and mutation panels.

ESMO open

Avec: P Ramarao-Milne , O Kondrashova , A-M Patch , K Nones , L T Koufariotis , F Newell , V Addala , V Lakis , O Holmes , C Leonard , S Wood , Q Xu , P Mukhopadhyay , M M Naeini , D Steinfort , J P Williamson , M Bint , C Pahoff , P T Nguyen , S Twaddell , D Arnold , C Grainge , F Basirzadeh , D Fielding , A J Dalley , H Chittoory , P T Simpson , L G Aoude , V F Bonazzi , K Patel , A P Barbour , D A Fennell , B W Robinson , J Creaney , G Hollway , J V Pearson , N Waddell

Germline variants alter immune surveillance.

Science (New York, N.Y.)

Avec: Nicola Waddell , Venkateswar Addala

Performance of tumour microenvironment deconvolution methods in breast cancer using single-cell simulated bulk mixtures.

Nature communications

Avec: Khoa A Tran , Venkateswar Addala , Rebecca L Johnston , David Lovell , Andrew Bradley , Lambros T Koufariotis , Scott Wood , Sunny Z Wu , Daniel Roden , Ghamdan Al-Eryani , Alexander Swarbrick , Elizabeth D Williams , John V Pearson , Olga Kondrashova , Nicola Waddell

Whole-genome sequencing of acral melanoma reveals genomic complexity and diversity.

Nature communications

Avec: Felicity Newell , James S Wilmott , Peter A Johansson , Katia Nones , Venkateswar Addala , Pamela Mukhopadhyay , Natasa Broit , Carol M Amato , Robert Van Gulick , Stephen H Kazakoff , Ann-Marie Patch , Lambros T Koufariotis , Vanessa Lakis , Conrad Leonard , Scott Wood , Oliver Holmes , Qinying Xu , Karl Lewis , Theresa Medina , Rene Gonzalez , Robyn P M Saw , Andrew J Spillane , Jonathan R Stretch , Robert V Rawson , Peter M Ferguson , Tristan J Dodds , John F Thompson , Georgina V Long , Mitchell P Levesque , William A Robinson , John V Pearson , Graham J Mann , Richard A Scolyer , Nicola Waddell , Nicholas K Hayward

Multiomic profiling of checkpoint inhibitor-treated melanoma: Identifying predictors of response and resistance, and markers of biological discordance.

Cancer cell

Avec: Felicity Newell , Ines Pires da Silva , Peter A Johansson , Alexander M Menzies , James S Wilmott , Venkateswar Addala , Matteo S Carlino , Helen Rizos , Katia Nones , Jarem J Edwards , Vanessa Lakis , Stephen H Kazakoff , Pamela Mukhopadhyay , Peter M Ferguson , Conrad Leonard , Lambros T Koufariotis , Scott Wood , Christian U Blank , John F Thompson , Andrew J Spillane , Robyn P M Saw , Kerwin F Shannon , John V Pearson , Graham J Mann , Nicholas K Hayward , Richard A Scolyer , Nicola Waddell , Georgina V Long

Comprehensive genomic and tumour immune profiling reveals potential therapeutic targets in malignant pleural mesothelioma.

Genome medicine

Avec: Jenette Creaney , Ann-Marie Patch , Venkateswar Addala , Sophie A Sneddon , Katia Nones , Ian M Dick , Y C Gary Lee , Felicity Newell , Ebony J Rouse , Marjan M Naeini , Olga Kondrashova , Vanessa Lakis , Apostolos Nakas , David Waller , Annabel Sharkey , Pamela Mukhopadhyay , Stephen H Kazakoff , Lambros T Koufariotis , Aimee L Davidson , Priya Ramarao-Milne , Oliver Holmes , Qinying Xu , Conrad Leonard , Scott Wood , Sean M Grimmond , Raphael Bueno , Dean A Fennell , John V Pearson , Bruce W Robinson , Nicola Waddell

Efficient detection and monitoring of pediatric brain malignancies with liquid biopsy based on patient-specific somatic mutation screening.

Neuro-oncology

Avec: Marija Kojic , Mellissa K Maybury , Nicola Waddell , Lambros T Koufariotis , Venkateswar Addala , Amanda Millar , Scott Wood , John V Pearson , Jordan R Hansford , Tim Hassall , Brandon J Wainwright

Multi-omic features of oesophageal adenocarcinoma in patients treated with preoperative neoadjuvant therapy.

Nature communications

Avec: Marjan M Naeini , Felicity Newell , Lauren G Aoude , Vanessa F Bonazzi , Kalpana Patel , Guy Lampe , Lambros T Koufariotis , Vanessa Lakis , Venkateswar Addala , Olga Kondrashova , Rebecca L Johnston , Sowmya Sharma , Sandra Brosda , Oliver Holmes , Conrad Leonard , Scott Wood , Qinying Xu , Janine Thomas , Euan Walpole , G Tao Mai , Stephen P Ackland , Jarad Martin , Matthew Burge , Robert Finch , Christos S Karapetis , Jenny Shannon , Louise Nott , Robert Bohmer , Kate Wilson , Elizabeth Barnes , John R Zalcberg , B Mark Smithers , John Simes , Timothy Price , Val Gebski , Katia Nones , David I Watson , John V Pearson , Andrew P Barbour , Nicola Waddell

The oesophageal adenocarcinoma tumour immune microenvironment dictates outcomes with different modalities of neoadjuvant therapy - results from the AGITG DOCTOR trial and the cancer evolution biobank.

Frontiers in immunology

Avec: James M Lonie , Sandra Brosda , Vanessa F Bonazzi , Lauren G Aoude , Kalpana Patel , Ian Brown , Sowmya Sharma , Guy Lampe , Venkateswar Addala , Lambros T Koufariotis , Scott Wood , Nicola Waddell , Riccardo Dolcetti , Andrew P Barbour

Spatial intra-tumour heterogeneity and treatment-induced genomic evolution in oesophageal adenocarcinoma: implications for prognosis and therapy.

Genome medicine

Avec: Sandra Brosda , Lauren G Aoude , Vanessa F Bonazzi , Kalpana Patel , James M Lonie , Clemence J Belle , Felicity Newell , Lambros T Koufariotis , Venkateswar Addala , Marjan M Naeini , Auteur inconnu , John V Pearson , Lutz Krause , Nicola Waddell , Andrew P Barbour

Generalising uncertainty improves accuracy and safety of deep learning analytics applied to oncology.

Scientific reports

Avec: Samual MacDonald , Helena Foley , Melvyn Yap , Rebecca L Johnston , Kaiah Steven , Lambros T Koufariotis , Sowmya Sharma , Scott Wood , Venkateswar Addala , John V Pearson , Fred Roosta , Nicola Waddell , Olga Kondrashova , Maciej Trzaskowski

Computational immunogenomic approaches to predict response to cancer immunotherapies.

Nature reviews. Clinical oncology

Avec: Venkateswar Addala , Felicity Newell , John V Pearson , Alec Redwood , Bruce W Robinson , Jenette Creaney , Nicola Waddell

Réseau de co-auteurs

Nicola Waddell 11 collaborations

Venkateswar Addala 11 collaborations

Lambros T Koufariotis 9 collaborations

John V Pearson 9 collaborations

Scott Wood 8 collaborations

Felicity Newell 6 collaborations

Olga Kondrashova 4 collaborations

Katia Nones 4 collaborations

Vanessa Lakis 4 collaborations

Conrad Leonard 4 collaborations

Rebecca L Johnston 3 collaborations

Pamela Mukhopadhyay 3 collaborations

Stephen H Kazakoff 3 collaborations

Oliver Holmes 3 collaborations

Qinying Xu 3 collaborations

Marjan M Naeini 3 collaborations

Lauren G Aoude 3 collaborations

Vanessa F Bonazzi 3 collaborations

Kalpana Patel 3 collaborations

Sowmya Sharma 3 collaborations

Sandra Brosda 3 collaborations

Andrew P Barbour 3 collaborations

James S Wilmott 2 collaborations

Peter A Johansson 2 collaborations

Ann-Marie Patch 2 collaborations

Robyn P M Saw 2 collaborations

Andrew J Spillane 2 collaborations

Peter M Ferguson 2 collaborations

John F Thompson 2 collaborations

Georgina V Long 2 collaborations

Graham J Mann 2 collaborations

Richard A Scolyer 2 collaborations

Nicholas K Hayward 2 collaborations

Jenette Creaney 2 collaborations

Bruce W Robinson 2 collaborations

Guy Lampe 2 collaborations

James M Lonie 2 collaborations

P Ramarao-Milne 1 collaboration

O Kondrashova 1 collaboration

A-M Patch 1 collaboration

K Nones 1 collaboration

L T Koufariotis 1 collaboration

F Newell 1 collaboration

V Lakis 1 collaboration

O Holmes 1 collaboration

C Leonard 1 collaboration

S Wood 1 collaboration

Q Xu 1 collaboration

P Mukhopadhyay 1 collaboration

M M Naeini 1 collaboration

D Steinfort 1 collaboration

J P Williamson 1 collaboration

M Bint 1 collaboration

C Pahoff 1 collaboration

P T Nguyen 1 collaboration

S Twaddell 1 collaboration

D Arnold 1 collaboration

C Grainge 1 collaboration

F Basirzadeh 1 collaboration

D Fielding 1 collaboration

A J Dalley 1 collaboration

H Chittoory 1 collaboration

P T Simpson 1 collaboration

L G Aoude 1 collaboration

V F Bonazzi 1 collaboration

K Patel 1 collaboration

A P Barbour 1 collaboration

D A Fennell 1 collaboration

B W Robinson 1 collaboration

J Creaney 1 collaboration

G Hollway 1 collaboration

J V Pearson 1 collaboration

N Waddell 1 collaboration

Khoa A Tran 1 collaboration

David Lovell 1 collaboration

Andrew Bradley 1 collaboration

Sunny Z Wu 1 collaboration

Daniel Roden 1 collaboration

Ghamdan Al-Eryani 1 collaboration

Alexander Swarbrick 1 collaboration

Elizabeth D Williams 1 collaboration

Natasa Broit 1 collaboration

Carol M Amato 1 collaboration

Robert Van Gulick 1 collaboration

Karl Lewis 1 collaboration

Theresa Medina 1 collaboration

Rene Gonzalez 1 collaboration

Jonathan R Stretch 1 collaboration

Robert V Rawson 1 collaboration

Tristan J Dodds 1 collaboration

Mitchell P Levesque 1 collaboration

William A Robinson 1 collaboration

Ines Pires da Silva 1 collaboration

Alexander M Menzies 1 collaboration

Matteo S Carlino 1 collaboration

Helen Rizos 1 collaboration

Jarem J Edwards 1 collaboration

Christian U Blank 1 collaboration

Kerwin F Shannon 1 collaboration

Sophie A Sneddon 1 collaboration

Ian M Dick 1 collaboration

Y C Gary Lee 1 collaboration

Ebony J Rouse 1 collaboration

Apostolos Nakas 1 collaboration

David Waller 1 collaboration

Annabel Sharkey 1 collaboration

Aimee L Davidson 1 collaboration

Priya Ramarao-Milne 1 collaboration

Sean M Grimmond 1 collaboration

Raphael Bueno 1 collaboration

Dean A Fennell 1 collaboration

Marija Kojic 1 collaboration

Mellissa K Maybury 1 collaboration

Amanda Millar 1 collaboration

Jordan R Hansford 1 collaboration

Tim Hassall 1 collaboration

Brandon J Wainwright 1 collaboration

Janine Thomas 1 collaboration

Euan Walpole 1 collaboration

G Tao Mai 1 collaboration

Stephen P Ackland 1 collaboration

Jarad Martin 1 collaboration

Matthew Burge 1 collaboration

Robert Finch 1 collaboration

Christos S Karapetis 1 collaboration

Jenny Shannon 1 collaboration

Louise Nott 1 collaboration

Robert Bohmer 1 collaboration

Kate Wilson 1 collaboration

Elizabeth Barnes 1 collaboration

John R Zalcberg 1 collaboration

B Mark Smithers 1 collaboration

John Simes 1 collaboration

Timothy Price 1 collaboration

Val Gebski 1 collaboration

David I Watson 1 collaboration

Ian Brown 1 collaboration

Riccardo Dolcetti 1 collaboration

Clemence J Belle 1 collaboration

None None 1 collaboration

Lutz Krause 1 collaboration

Samual MacDonald 1 collaboration

Helena Foley 1 collaboration

Melvyn Yap 1 collaboration

Kaiah Steven 1 collaboration

Fred Roosta 1 collaboration

Maciej Trzaskowski 1 collaboration

Alec Redwood 1 collaboration