A generally applicable lightweight method for calculating a value structure for tools and services in bioinformatics infrastructure projects.


Journal

Briefings in bioinformatics
ISSN: 1477-4054
Titre abrégé: Brief Bioinform
Pays: England
ID NLM: 100912837

Informations de publication

Date de publication:
19 07 2019
Historique:
received: 29 06 2017
revised: 22 09 2017
pubmed: 2 11 2017
medline: 11 4 2020
entrez: 2 11 2017
Statut: ppublish

Résumé

Sustainable noncommercial bioinformatics infrastructures are a prerequisite to use and take advantage of the potential of big data analysis for research and economy. Consequently, funders, universities and institutes as well as users ask for a transparent value model for the tools and services offered. In this article, a generally applicable lightweight method is described by which bioinformatics infrastructure projects can estimate the value of tools and services offered without determining exactly the total costs of ownership. Five representative scenarios for value estimation from a rough estimation to a detailed breakdown of costs are presented. To account for the diversity in bioinformatics applications and services, the notion of service-specific 'service provision units' is introduced together with the factors influencing them and the main underlying assumptions for these 'value influencing factors'. Special attention is given on how to handle personnel costs and indirect costs such as electricity. Four examples are presented for the calculation of the value of tools and services provided by the German Network for Bioinformatics Infrastructure (de.NBI): one for tool usage, one for (Web-based) database analyses, one for consulting services and one for bioinformatics training events. Finally, from the discussed values, the costs of direct funding and the costs of payment of services by funded projects are calculated and compared.

Identifiants

pubmed: 29092005
pii: 4582343
doi: 10.1093/bib/bbx140
pmc: PMC6781588
doi:

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

1215-1221

Informations de copyright

© The Author 2017. Published by Oxford University Press.

Références

Nature. 2015 Apr 9;520(7546):151-2
pubmed: 25855439
Brief Bioinform. 2019 Mar 22;20(2):370-374
pubmed: 28430873
Nucleic Acids Res. 2014 Jul;42(Web Server issue):W436-41
pubmed: 24792157
J Comput Biol. 1996 Fall;3(3):465-78
pubmed: 8891960
Nucleic Acids Res. 2013 Jan;41(Database issue):D590-6
pubmed: 23193283
Trends Biotechnol. 2012 May;30(5):241-2
pubmed: 22417641
F1000Res. 2015 Feb 02;4:33
pubmed: 26913186

Auteurs

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Classifications MeSH