Neuroconductor: an R platform for medical imaging analysis.
Bioinformatics
Image analysis
Statistical modelling
Journal
Biostatistics (Oxford, England)
ISSN: 1468-4357
Titre abrégé: Biostatistics
Pays: England
ID NLM: 100897327
Informations de publication
Date de publication:
01 04 2019
01 04 2019
Historique:
received:
01
02
2017
accepted:
12
11
2017
pubmed:
13
1
2018
medline:
30
8
2019
entrez:
12
1
2018
Statut:
ppublish
Résumé
Neuroconductor (https://neuroconductor.org) is an open-source platform for rapid testing and dissemination of reproducible computational imaging software. The goals of the project are to: (i) provide a centralized repository of R software dedicated to image analysis, (ii) disseminate software updates quickly, (iii) train a large, diverse community of scientists using detailed tutorials and short courses, (iv) increase software quality via automatic and manual quality controls, and (v) promote reproducibility of image data analysis. Based on the programming language R (https://www.r-project.org/), Neuroconductor starts with 51 inter-operable packages that cover multiple areas of imaging including visualization, data processing and storage, and statistical inference. Neuroconductor accepts new R package submissions, which are subject to a formal review and continuous automated testing. We provide a description of the purpose of Neuroconductor and the user and developer experience.
Identifiants
pubmed: 29325029
pii: 4791943
doi: 10.1093/biostatistics/kxx068
pmc: PMC6409417
doi:
Types de publication
Journal Article
Research Support, N.I.H., Extramural
Research Support, Non-U.S. Gov't
Langues
eng
Sous-ensembles de citation
IM
Pagination
218-239Subventions
Organisme : NHLBI NIH HHS
ID : R01 HL123407
Pays : United States
Organisme : NINDS NIH HHS
ID : R01 NS060910
Pays : United States
Commentaires et corrections
Type : ErratumIn
Informations de copyright
© The Author 2018. Published by Oxford University Press. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.
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