The Medical Genome Reference Bank: a whole-genome data resource of 4000 healthy elderly individuals. Rationale and cohort design.


Journal

European journal of human genetics : EJHG
ISSN: 1476-5438
Titre abrégé: Eur J Hum Genet
Pays: England
ID NLM: 9302235

Informations de publication

Date de publication:
02 2019
Historique:
received: 20 03 2018
accepted: 11 09 2018
revised: 19 08 2018
pubmed: 26 10 2018
medline: 10 5 2019
entrez: 25 10 2018
Statut: ppublish

Résumé

Allele frequency data from human reference populations is of increasing value for the filtering, interpretation, and assignment of pathogenicity to genetic variants. Aged and healthy populations are more likely to be selectively depleted of pathogenic alleles and therefore particularly suitable as a reference population for the major diseases of clinical and public health importance. However, reference studies of confirmed healthy elderly individuals have remained under-represented in human genetics. Here we describe the Medical Genome Reference Bank (MGRB), a large-scale comprehensive whole-genome data set of healthy elderly individuals. The MGRB provides an accessible data resource for health-related research and clinical genetics and a powerful platform for studying the genetics of healthy ageing. The MGRB is comprised of 4000 healthy, older individuals, mostly of European descent, recruited from two Australian community-based cohorts. Each participant lived ≥70 years with no reported history of cancer, cardiovascular disease, or dementia. DNA derived from blood samples has been subject to whole-genome sequencing. The MGRB has committed to a policy of data sharing, employing a hierarchical data management system to maintain participant privacy and confidentiality, while maximising research and clinical usage of the database. The MGRB represents a resource of international significance, which will be made broadly accessible to the clinical and genetic research community.

Identifiants

pubmed: 30353151
doi: 10.1038/s41431-018-0279-z
pii: 10.1038/s41431-018-0279-z
pmc: PMC6336775
doi:

Types de publication

Journal Article Research Support, N.I.H., Extramural Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

308-316

Subventions

Organisme : NIA NIH HHS
ID : U01 AG029824
Pays : United States

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Auteurs

Paul Lacaze (P)

Department of Epidemiology and Preventive Medicine, School of Public Health and Preventive Medicine, Monash University, Melbourne, VIC, Australia. paul.lacaze@monash.edu.

Mark Pinese (M)

Garvan Institute of Medical Research, Sydney, NSW, Australia. m.pinese@garvan.org.au.
St Vincent's Clinical School, Faculty of Medicine, University of New South Wales, Sydney, NSW, Australia. m.pinese@garvan.org.au.

Warren Kaplan (W)

Garvan Institute of Medical Research, Sydney, NSW, Australia.

Andrew Stone (A)

Garvan Institute of Medical Research, Sydney, NSW, Australia.

Marie-Jo Brion (MJ)

Garvan Institute of Medical Research, Sydney, NSW, Australia.

Robyn L Woods (RL)

Department of Epidemiology and Preventive Medicine, School of Public Health and Preventive Medicine, Monash University, Melbourne, VIC, Australia.

Martin McNamara (M)

Sax Institute, Sydney, NSW, Australia.

John J McNeil (JJ)

Department of Epidemiology and Preventive Medicine, School of Public Health and Preventive Medicine, Monash University, Melbourne, VIC, Australia.

Marcel E Dinger (ME)

Garvan Institute of Medical Research, Sydney, NSW, Australia.
St Vincent's Clinical School, Faculty of Medicine, University of New South Wales, Sydney, NSW, Australia.

David M Thomas (DM)

Garvan Institute of Medical Research, Sydney, NSW, Australia.
St Vincent's Clinical School, Faculty of Medicine, University of New South Wales, Sydney, NSW, Australia.

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