HMCES Maintains Genome Integrity by Shielding Abasic Sites in Single-Strand DNA.


Journal

Cell
ISSN: 1097-4172
Titre abrégé: Cell
Pays: United States
ID NLM: 0413066

Informations de publication

Date de publication:
10 01 2019
Historique:
received: 07 08 2018
revised: 15 10 2018
accepted: 29 10 2018
pubmed: 18 12 2018
medline: 14 11 2019
entrez: 18 12 2018
Statut: ppublish

Résumé

Abasic sites are one of the most common DNA lesions. All known abasic site repair mechanisms operate only when the damage is in double-stranded DNA. Here, we report the discovery of 5-hydroxymethylcytosine (5hmC) binding, ESC-specific (HMCES) as a sensor of abasic sites in single-stranded DNA. HMCES acts at replication forks, binds PCNA and single-stranded DNA, and generates a DNA-protein crosslink to shield abasic sites from error-prone processing. This unusual HMCES DNA-protein crosslink intermediate is resolved by proteasome-mediated degradation. Acting as a suicide enzyme, HMCES prevents translesion DNA synthesis and the action of endonucleases that would otherwise generate mutations and double-strand breaks. HMCES is evolutionarily conserved in all domains of life, and its biochemical properties are shared with its E. coli ortholog. Thus, HMCES is an ancient DNA lesion recognition protein that preserves genome integrity by promoting error-free repair of abasic sites in single-stranded DNA.

Identifiants

pubmed: 30554877
pii: S0092-8674(18)31454-5
doi: 10.1016/j.cell.2018.10.055
pmc: PMC6329640
mid: NIHMS1511529
pii:
doi:

Substances chimiques

DNA, Single-Stranded 0
DNA-Binding Proteins 0
Polynucleotides 0
Proliferating Cell Nuclear Antigen 0
apyrimidinic acid 0
Apurinic Acid 11002-22-5
5-hydroxymethylcytosine 1123-95-1
5-Methylcytosine 6R795CQT4H
DNA 9007-49-2
Endonucleases EC 3.1.-

Types de publication

Journal Article Research Support, N.I.H., Extramural Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

144-153.e13

Subventions

Organisme : NCI NIH HHS
ID : T32 CA009582
Pays : United States
Organisme : NCI NIH HHS
ID : P01 CA092584
Pays : United States
Organisme : NIGMS NIH HHS
ID : T32 GM007347
Pays : United States
Organisme : NIGMS NIH HHS
ID : F32 GM126646
Pays : United States
Organisme : NCI NIH HHS
ID : F30 CA228242
Pays : United States
Organisme : NIGMS NIH HHS
ID : R01 GM116616
Pays : United States

Informations de copyright

Copyright © 2018 Elsevier Inc. All rights reserved.

Références

J Cell Biol. 2011 Apr 4;193(1):97-108
pubmed: 21444690
Bioinformatics. 2014 Apr 1;30(7):923-30
pubmed: 24227677
Nat Cell Biol. 2011 Mar;13(3):243-53
pubmed: 21317883
Chem Soc Rev. 2008 Jul;37(7):1423-31
pubmed: 18568168
PLoS One. 2015 May 12;10(5):e0125482
pubmed: 25965342
Mol Cell. 2015 Sep 17;59(6):998-1010
pubmed: 26365379
Bioinformatics. 2010 Jan 1;26(1):139-40
pubmed: 19910308
Cell. 1994 Sep 9;78(5):787-98
pubmed: 8087846
Cell Rep. 2018 Jun 19;23(12):3419-3428
pubmed: 29924986
Mol Cell. 2006 Jun 23;22(6):719-29
pubmed: 16793542
J Photochem Photobiol B. 1999 Mar;49(1):71-80
pubmed: 10365447
Nature. 1993 Apr 22;362(6422):709-15
pubmed: 8469282
Mol Cell Biol. 2004 Nov;24(21):9305-16
pubmed: 15485900
PLoS Genet. 2008 Jun 27;4(6):e1000110
pubmed: 18584027
PLoS Biol. 2009 Apr 28;7(4):e96
pubmed: 19402753
Nucleic Acids Res. 2012 May;40(10):4288-97
pubmed: 22287627
Mutat Res. 1989 Mar-May;220(2-3):61-72
pubmed: 2494447
Redox Biol. 2014 Jan 09;2:457-65
pubmed: 24624335
Science. 2011 Sep 2;333(6047):1303-7
pubmed: 21817016
Mutat Res. 2003 Oct 29;531(1-2):157-63
pubmed: 14637252
Cell. 2012 May 25;149(5):979-93
pubmed: 22608084
Nucleic Acids Res. 1983 Mar 11;11(5):1475-89
pubmed: 6828386
Gene. 1992 Aug 1;117(1):1-5
pubmed: 1644298
Cell Rep. 2017 Oct 10;21(2):482-494
pubmed: 29020633
Biol Direct. 2013 Aug 15;8:20
pubmed: 23945014
Nat Methods. 2012 Jun 28;9(7):676-82
pubmed: 22743772
Cold Spring Harb Perspect Biol. 2013 Mar 01;5(3):a012708
pubmed: 23457261
Biology (Basel). 2012 Dec 14;1(3):895-905
pubmed: 24832523
Cell. 2013 Feb 28;152(5):1146-59
pubmed: 23434322
Photochem Photobiol. 1991 Nov;54(5):741-6
pubmed: 1665910
Nucleic Acids Res. 2013 May;41(9):e104
pubmed: 23519618
Cell. 2014 Jul 17;158(2):327-338
pubmed: 24998930
Nat Rev Mol Cell Biol. 2017 Sep;18(9):563-573
pubmed: 28655905
Genes Dev. 2011 Jun 15;25(12):1320-7
pubmed: 21685366
Cold Spring Harb Perspect Biol. 2013 Apr 01;5(4):a012583
pubmed: 23545420
Nat Genet. 2003 Mar;33 Suppl:245-54
pubmed: 12610534
Mol Biol Evol. 2017 Mar 1;34(3):654-665
pubmed: 28025279
Cell. 2014 Oct 9;159(2):346-57
pubmed: 25303529
Cancer Res. 2014 May 15;74(10):2835-45
pubmed: 24662920
DNA Repair (Amst). 2007 Apr 1;6(4):505-16
pubmed: 17116429
Science. 1994 Nov 4;266(5186):776-9
pubmed: 7973629
Mol Cell. 2011 Apr 22;42(2):237-49
pubmed: 21396873
Nat Methods. 2015 Apr;12(4):357-60
pubmed: 25751142
J Photochem Photobiol B. 1994 Nov;26(2):117-39
pubmed: 7815187
Nat Rev Mol Cell Biol. 2013 May;14(5):269-82
pubmed: 23594953
Biochemistry. 1992 Apr 14;31(14):3703-8
pubmed: 1567824
Nat Protoc. 2013 Nov;8(11):2281-2308
pubmed: 24157548
Nat Struct Mol Biol. 2018 Jun;25(6):446-453
pubmed: 29807999
Proc Natl Acad Sci U S A. 2015 Jul 14;112(28):8602-7
pubmed: 26124145
PLoS Genet. 2011 Sep;7(9):e1002262
pubmed: 21931560

Auteurs

Kareem N Mohni (KN)

Department of Biochemistry, Vanderbilt University School of Medicine, Nashville, TN 37232, USA.

Sarah R Wessel (SR)

Department of Biochemistry, Vanderbilt University School of Medicine, Nashville, TN 37232, USA.

Runxiang Zhao (R)

Department of Biochemistry, Vanderbilt University School of Medicine, Nashville, TN 37232, USA.

Andrea C Wojciechowski (AC)

Department of Biochemistry, Vanderbilt University School of Medicine, Nashville, TN 37232, USA.

Jessica W Luzwick (JW)

Department of Biochemistry, Vanderbilt University School of Medicine, Nashville, TN 37232, USA.

Hillary Layden (H)

Department of Biochemistry, Vanderbilt University School of Medicine, Nashville, TN 37232, USA.

Brandt F Eichman (BF)

Department of Biochemistry, Vanderbilt University School of Medicine, Nashville, TN 37232, USA; Department of Biological Sciences, Vanderbilt University, Nashville, TN 37232, USA.

Petria S Thompson (PS)

Department of Biochemistry, Vanderbilt University School of Medicine, Nashville, TN 37232, USA.

Kavi P M Mehta (KPM)

Department of Biochemistry, Vanderbilt University School of Medicine, Nashville, TN 37232, USA.

David Cortez (D)

Department of Biochemistry, Vanderbilt University School of Medicine, Nashville, TN 37232, USA. Electronic address: david.cortez@vanderbilt.edu.

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Classifications MeSH