Characterization of an Unusual DS-1-Like G8P[8] Rotavirus Strain from Japan in 2017: Evolution of Emerging DS-1-Like G8P[8] Strains through Reassortment.


Journal

Japanese journal of infectious diseases
ISSN: 1884-2836
Titre abrégé: Jpn J Infect Dis
Pays: Japan
ID NLM: 100893704

Informations de publication

Date de publication:
24 Jul 2019
Historique:
pubmed: 1 3 2019
medline: 10 8 2019
entrez: 1 3 2019
Statut: ppublish

Résumé

The emergence of unusual DS-1-like intergenogroup reassortant rotaviruses with a bovine-like G8 genotype (DS-1-like G8P[8] strains) has been reported in several Asian countries. During the rotavirus surveillance program in Japan in 2017, a DS-1-like G8P[8] strain (RVA/Human-wt/JPN/SO1162/2017/G8P[8]) was identified in 43 rotavirus-positive stool samples. Strain SO1162 was shown to have a unique genotype constellation, including genes from both genogroup 1 and 2: G8-P[8]-I2-R2-C2-M2-A2-N2-T2-E2-H2. Phylogenetic analysis revealed that the VP1 gene of strain SO1162 appeared to have originated from DS-1-like G1P[8] strains from Thailand and Vietnam, while the remaining 10 genes were closely related to those of previously reported DS-1-like G8P[8] strains. Thus, SO1162 was suggested to be a reassortant strain that acquired the VP1 gene from Southeast Asian DS-1-like G1P[8] strains on the genetic background of co-circulating DS-1-like G8P[8] strains. Our findings provide important insights into the evolutionary dynamics of emerging DS-1-like G8P[8] strains.

Identifiants

pubmed: 30814461
doi: 10.7883/yoken.JJID.2018.484
doi:

Substances chimiques

RNA, Viral 0

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

256-260

Auteurs

Hajime Kamiya (H)

Infectious Disease Surveillance Center, National Institute of Infectious Diseases.

Ratana Tacharoenmuang (R)

Department of Virology and Parasitology, Fujita Health University School of Medicine.
National Institute of Health, Department of Medical Sciences.

Tomihiko Ide (T)

Department of Virology and Parasitology, Fujita Health University School of Medicine.

Manami Negoro (M)

Institute for Clinical Research, National Mie Hospital.

Takaaki Tanaka (T)

Department of Pediatrics, Kawasaki Medical School.

Kazutoyo Asada (K)

Department of Pediatrics, National Mie Hospital.

Haruna Nakamura (H)

Department of Pediatrics, National Mie Hospital.

Katsumi Sugiura (K)

Department of Pediatrics, National Mie Hospital.

Masakazu Umemoto (M)

Umemoto Children's Clinic.

Haruo Kuroki (H)

Sotobo Children's Clinic.

Hiroaki Ito (H)

Department of Pediatrics, Kameda Medical Center.

Shigeki Tanaka (S)

Department of Pediatrics, Mie Chuo Medical Center.

Mitsue Ito (M)

Department of Pediatrics, Japanese Red Cross Ise Hospital.

Saori Fukuda (S)

Department of Virology and Parasitology, Fujita Health University School of Medicine.

Riona Hatazawa (R)

Department of Virology and Parasitology, Fujita Health University School of Medicine.

Yuya Hara (Y)

Department of Virology and Parasitology, Fujita Health University School of Medicine.

Ratigorn Guntapong (R)

National Institute of Health, Department of Medical Sciences.

Takayuki Murata (T)

Department of Virology and Parasitology, Fujita Health University School of Medicine.

Kiyosu Taniguchi (K)

Department of Pediatrics, National Mie Hospital.

Shigeru Suga (S)

Department of Pediatrics, National Mie Hospital.

Takashi Nakano (T)

Department of Pediatrics, Kawasaki Medical School.

Koki Taniguchi (K)

Department of Virology and Parasitology, Fujita Health University School of Medicine.

Satoshi Komoto (S)

Department of Virology and Parasitology, Fujita Health University School of Medicine.

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Classifications MeSH