Cloning of a novel trypsin inhibitor from the Traditional Chinese medicine decoction pieces, Radix Trichosanthis.


Journal

Analytical biochemistry
ISSN: 1096-0309
Titre abrégé: Anal Biochem
Pays: United States
ID NLM: 0370535

Informations de publication

Date de publication:
01 08 2019
Historique:
received: 05 10 2018
revised: 29 01 2019
accepted: 26 02 2019
pubmed: 5 3 2019
medline: 9 4 2020
entrez: 5 3 2019
Statut: ppublish

Résumé

Most herbs of traditional Chinese medicine (TCM) are used as air-dried decoction pieces that are manufactured and kept at ambient temperature for long periods. Given the ability of some desiccation-tolerant plants to conserve RNA, it could be worthwhile to isolate mRNA from TCM decoction pieces as part of a transcriptomic strategy to identify new substances with potential pharmaceutical application. Here, we report the molecular cloning of a novel trypsin inhibitor (as the probable alleleic variants TKTI-2 and TKTI-3) from the decoction piece of Radix Trichosanthis, representing the dried root of Trichosanthes kirilowii. From this material, the total RNA was extracted and a cDNA library was constructed from the isolated mRNA from which the cDNAs of two precursors were successfully cloned and sequenced. TKTI-3 showed an amino-acid substitution in the otherwise highly-conserved P1-P1' reaction site of the mature peptide, which we confirmed to not be an artefact. Subsequent analysis using LC-MS/MS detected the presence of specific tryptic peptides expected from TKTI-3, confirming the presence and expression of this locus in Radix Trichosanthis. More generally, this study indicates that mRNA can persist in decoction pieces and so could present a viable option for the molecular cloning from other TCMs.

Identifiants

pubmed: 30831099
pii: S0003-2697(18)31042-X
doi: 10.1016/j.ab.2019.02.028
pii:
doi:

Substances chimiques

Drugs, Chinese Herbal 0
Trypsin Inhibitors 0
radix Trichosanthis 0
RNA 63231-63-0

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

23-28

Informations de copyright

Copyright © 2019. Published by Elsevier Inc.

Auteurs

Mengru Sang (M)

School of Pharmacy, Nanjing University of Chinese Medicine, Nanjing, China; Natural Drug Discovery Group, School of Pharmacy, Queen's University Belfast, Belfast, Northern Ireland, UK.

Yuan Ying (Y)

School of Pharmacy, Nanjing University of Chinese Medicine, Nanjing, China; Natural Drug Discovery Group, School of Pharmacy, Queen's University Belfast, Belfast, Northern Ireland, UK.

Qinan Wu (Q)

School of Pharmacy, Nanjing University of Chinese Medicine, Nanjing, China; Collaborative Innovation Center of Chinese Medicinal Resources Industrialization, Nanjing, China. Electronic address: qnwyjs@163.com.

Chengbang Ma (C)

Natural Drug Discovery Group, School of Pharmacy, Queen's University Belfast, Belfast, Northern Ireland, UK.

Xinping Xi (X)

Natural Drug Discovery Group, School of Pharmacy, Queen's University Belfast, Belfast, Northern Ireland, UK. Electronic address: x.xi@qub.ac.uk.

Mei Zhou (M)

Natural Drug Discovery Group, School of Pharmacy, Queen's University Belfast, Belfast, Northern Ireland, UK.

Lei Wang (L)

Natural Drug Discovery Group, School of Pharmacy, Queen's University Belfast, Belfast, Northern Ireland, UK.

Olaf R P Bininda-Emonds (ORP)

AG Systematik und Evolutionsbiologie, IBU-Faculty V, Carl von Ossietzky University Oldenburg, Oldenburg, Germany.

Tianbao Chen (T)

Natural Drug Discovery Group, School of Pharmacy, Queen's University Belfast, Belfast, Northern Ireland, UK.

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Classifications MeSH