Molecular Epidemiology of HIV-1 Subtype G in the Russian Federation.
Elista
HIV-1
molecular epidemiology
near full-length genome sequencing
nosocomial outbreak
subtype G
unique recombinant forms
Journal
Viruses
ISSN: 1999-4915
Titre abrégé: Viruses
Pays: Switzerland
ID NLM: 101509722
Informations de publication
Date de publication:
16 04 2019
16 04 2019
Historique:
received:
26
03
2019
revised:
12
04
2019
accepted:
13
04
2019
entrez:
19
4
2019
pubmed:
19
4
2019
medline:
30
4
2020
Statut:
epublish
Résumé
Although HIV-1 subtype A has predominated in Russia since the end of the 20th century, other viral variants also circulate in this country. The dramatic outbreak of HIV-1 subtype G in 1988-1990 represents the origin of this variant spreading in Russia. However, full genome sequencing of the nosocomial viral variant and an analysis of the current circulating variants have not been conducted. We performed near full-length genome sequencing and phylogenetic and recombination analyses of 11 samples; the samples were determined to be subtype G based on an analysis of the
Identifiants
pubmed: 30995717
pii: v11040348
doi: 10.3390/v11040348
pmc: PMC6521041
pii:
doi:
Types de publication
Journal Article
Research Support, Non-U.S. Gov't
Langues
eng
Sous-ensembles de citation
IM
Références
Virus Evol. 2018 Jun 08;4(1):vey016
pubmed: 29942656
Lancet Infect Dis. 2019 Feb;19(2):143-155
pubmed: 30509777
PLoS One. 2012;7(5):e36494
pubmed: 22574170
PLoS One. 2017 Oct 30;12(10):e0186928
pubmed: 29084239
J Virol. 2011 Oct;85(20):10755-63
pubmed: 21795343
Expert Rev Anti Infect Ther. 2013 Sep;11(9):885-96
pubmed: 24011334
Infect Chemother. 2017 Mar;49(1):1-9
pubmed: 28332348
Zh Mikrobiol Epidemiol Immunobiol. 1990 Apr;(4):17-23
pubmed: 2143611
Indian J Med Microbiol. 2008 Jan-Mar;26(1):71-4
pubmed: 18227604
PLoS One. 2015 May 20;10(5):e0127384
pubmed: 25993094
Infect Genet Evol. 2016 Dec;46:256-268
pubmed: 27287560
Brief Bioinform. 2019 Jan 18;20(1):15-25
pubmed: 28968771
PLoS One. 2016 Feb 22;11(2):e0148549
pubmed: 26900693
AIDS Res Hum Retroviruses. 2015 Apr;31(4):412-20
pubmed: 25492033
Nucleic Acids Res. 2004 Mar 19;32(5):1792-7
pubmed: 15034147
BMC Bioinformatics. 2006 May 22;7:265
pubmed: 16716226
Ter Arkh. 2017;89(11):44-49
pubmed: 29260745
Infect Genet Evol. 2016 Dec;46:180-189
pubmed: 27321440
Bioinformatics. 2014 Aug 1;30(15):2114-20
pubmed: 24695404
Bioinformatics. 2014 May 1;30(9):1312-3
pubmed: 24451623
AIDS Rev. 2013 Oct-Dec;15(4):204-12
pubmed: 24192601
Genome Res. 2012 May;22(5):939-46
pubmed: 22267522
Lancet Infect Dis. 2019 Feb;19(2):114-115
pubmed: 30509776
Medicine (Baltimore). 2016 Aug;95(32):e4346
pubmed: 27512845
AIDS Res Hum Retroviruses. 2018 Jul;34(7):629-634
pubmed: 29587492
J Virol Methods. 2018 Nov;261:40-45
pubmed: 30086382
PLoS One. 2010 Mar 10;5(3):e9490
pubmed: 20224823
HIV Med. 2005 Sep;6(5):313-20
pubmed: 16156878