Rational development of transformation in Clostridium thermocellum ATCC 27405 via complete methylome analysis and evasion of native restriction-modification systems.
Clostridium thermocellum
Methylome
Real-time sequencing
Restriction–modification systems
Single molecule
Whole-genome bisulfite sequencing
Journal
Journal of industrial microbiology & biotechnology
ISSN: 1476-5535
Titre abrégé: J Ind Microbiol Biotechnol
Pays: Germany
ID NLM: 9705544
Informations de publication
Date de publication:
Oct 2019
Oct 2019
Historique:
received:
02
03
2019
accepted:
11
07
2019
pubmed:
26
7
2019
medline:
23
1
2020
entrez:
26
7
2019
Statut:
ppublish
Résumé
A major barrier to both metabolic engineering and fundamental biological studies is the lack of genetic tools in most microorganisms. One example is Clostridium thermocellum ATCC 27405
Identifiants
pubmed: 31342224
doi: 10.1007/s10295-019-02218-x
pii: 10.1007/s10295-019-02218-x
pmc: PMC6791906
doi:
Substances chimiques
DNA Restriction-Modification Enzymes
0
Types de publication
Journal Article
Langues
eng
Sous-ensembles de citation
IM
Pagination
1435-1443Subventions
Organisme : Biological and Environmental Research
ID : Center for Bioenergy Innovation
Organisme : Biological and Environmental Research
ID : BioEnergy Science Center
Références
Biotechnology (N Y). 1992 Feb;10(2):190-5
pubmed: 1368230
Biotechnol Adv. 2014 May-Jun;32(3):623-41
pubmed: 24768687
Biotechnol Biofuels. 2012 May 06;5(1):30
pubmed: 22559230
Methods Enzymol. 2012;510:317-30
pubmed: 22608734
Annu Rev Biochem. 1969;38:467-500
pubmed: 4897066
Arch Microbiol. 1977 Jul 26;114(1):1-7
pubmed: 20860
Front Microbiol. 2017 Oct 24;8:2060
pubmed: 29123506
Appl Environ Microbiol. 2004 Feb;70(2):883-90
pubmed: 14766568
Biotechnol Biofuels. 2015 Dec 24;8:227
pubmed: 26705421
PLoS One. 2015 Feb 19;10(2):e0118533
pubmed: 25695747
PLoS One. 2009;4(4):e5271
pubmed: 19384422
BMC Biol. 2013 Jan 22;11:4
pubmed: 23339471
Appl Environ Microbiol. 1981 Aug;42(2):231-40
pubmed: 16345823
Metab Eng. 2015 Sep;31:44-52
pubmed: 26170002
Bioengineered. 2013 Jan-Feb;4(1):15-20
pubmed: 22922214
Nat Methods. 2017 Apr;14(4):411-413
pubmed: 28218897
Appl Microbiol Biotechnol. 1996 Mar;45(1-2):127-31
pubmed: 11536742
Appl Environ Microbiol. 2005 Aug;71(8):4672-8
pubmed: 16085862
Appl Environ Microbiol. 1993 Apr;59(4):1077-81
pubmed: 8386500
Genome Res. 2013 Oct;23(10):1663-74
pubmed: 23739894
Front Chem. 2014 Aug 26;2:66
pubmed: 25207268
PLoS One. 2017 Sep 21;12(9):e0185234
pubmed: 28934361
Eur J Biochem. 1997 May 15;246(1):1-22
pubmed: 9210460
Microbiol Mol Biol Rev. 2000 Jun;64(2):412-34
pubmed: 10839821
Proc Natl Acad Sci U S A. 2000 Jun 6;97(12):6640-5
pubmed: 10829079
Mol Microbiol. 2002 Oct;46(2):439-52
pubmed: 12406220
Metab Eng. 2015 Nov;32:49-54
pubmed: 26369438
Nat Rev Genet. 2004 Jan;5(1):69-76
pubmed: 14708017
Nat Biotechnol. 2012 Dec;30(12):1232-9
pubmed: 23138224
Nucleic Acids Res. 2015 Dec 2;43(21):e148
pubmed: 26184871
Nucleic Acids Res. 2003 Apr 1;31(7):1805-12
pubmed: 12654995
J Bacteriol. 2001 Nov;183(21):6384-93
pubmed: 11591683
Front Microbiol. 2015 Nov 05;6:1209
pubmed: 26594201
J Ind Microbiol Biotechnol. 2015 Sep;42(9):1263-72
pubmed: 26162629
Nucleic Acids Res. 2012 Dec;40(22):11450-62
pubmed: 23034806
J Bacteriol. 1983 Nov;156(2):828-36
pubmed: 6195146
J Mol Biol. 1989 Mar 20;206(2):305-12
pubmed: 2716049
Biotechnol Biofuels. 2016 Jun 02;9:116
pubmed: 27257435
Biotechnol Biofuels. 2017 Jan 10;10:14
pubmed: 28077967
Nat Methods. 2010 Jun;7(6):461-5
pubmed: 20453866
Appl Environ Microbiol. 2010 Oct;76(19):6591-9
pubmed: 20693441
BMC Genomics. 2015 Jun 02;16:424
pubmed: 26031894
Nucleic Acids Res. 2009 Jan;37(1):e3
pubmed: 19004868
Biotechnol Biofuels. 2013 May 29;6(1):82
pubmed: 23714229
Genomics Proteomics Bioinformatics. 2015 Oct;13(5):278-89
pubmed: 26542840
Bioresour Technol. 2012 Jan;103(1):293-9
pubmed: 22055095
J Microbiol Biotechnol. 2011 Jul;21(7):675-8
pubmed: 21791952
PLoS Genet. 2010 Dec 23;6(12):e1001253
pubmed: 21203499
PLoS Genet. 2016 Feb 12;12(2):e1005854
pubmed: 26870957
Nucleic Acids Res. 2015 Jan;43(Database issue):D298-9
pubmed: 25378308
Biotechnol Biofuels. 2013 Dec 02;6(1):179
pubmed: 24295562