Genetic diversity of HLA system in two populations from Yucatán, Mexico: Mérida and rural Yucatán.


Journal

Human immunology
ISSN: 1879-1166
Titre abrégé: Hum Immunol
Pays: United States
ID NLM: 8010936

Informations de publication

Date de publication:
Sep 2020
Historique:
received: 08 07 2019
accepted: 11 07 2019
pubmed: 28 7 2019
medline: 17 6 2021
entrez: 27 7 2019
Statut: ppublish

Résumé

We studied HLA class I (HLA-A, -B) and class II (HLA-DRB1, -DQB1) alleles by PCR-SSP based typing in 324 Mexicans from the state of Yucatán living in the city of Mérida (N = 192) and rural communities (N = 132), to obtain information regarding allelic and haplotypic frequencies. We found that the most frequent haplotypes in the state of Yucatán include 16 Native American and one European haplotype. Admixture estimates revealed that the main genetic components in Yucatán are Native American (81.54 ± 4.99% by ML; 62.92% of Native American haplotypes) and European (11.50 ± 15.43% by ML; 23.26% of European haplotypes), and a less prominent African genetic component (6.96 ± 10.47% by ML; 5.93% of African haplotypes).

Identifiants

pubmed: 31345700
pii: S0198-8859(19)30968-1
doi: 10.1016/j.humimm.2019.07.280
pii:
doi:

Substances chimiques

HLA Antigens 0

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

569-572

Informations de copyright

Copyright © 2019 American Society for Histocompatibility and Immunogenetics. Published by Elsevier Inc. All rights reserved.

Auteurs

Julio Lara-Riegos (J)

Chemistry Faculty, Universidad Autónoma de Yucatán (UADY), Mérida, Yucatán, Mexico.

Rodrigo Barquera (R)

Department of Archaeogenetics, Max Planck Institute for the Science of Human History, Jena, Germany; Molecular Genetics Laboratory, Escuela Nacional de Antropología e Historia (ENAH), Mexico City, Mexico. Electronic address: barquera@shh.mpg.de.

Oana Del Castillo-Chávez (OD)

Centro INAH Yucatán, Instituto Nacional de Antropología e Historia, Mérida, Yucatán, Mexico.

Carolina Elizabeth Medina-Escobedo (CE)

Unit of Research and Education in Health, Unidad Médica de Alta Especialidad (UMAE) # 10, Instituto Mexicano del Seguro Social (IMSS), Mérida, Yucatán, Mexico.

Diana Iraíz Hernández-Zaragoza (DI)

Molecular Genetics Laboratory, Escuela Nacional de Antropología e Historia (ENAH), Mexico City, Mexico; Immunogenetics Unit, Técnicas Genéticas Aplicadas a la Clínica (TGAC), Mexico City, Mexico.

Esteban Arrieta-Bolaños (E)

Institute for Experimental Cellular Therapy, University Hospital Essen, Essen, Germany.

Stephen Clayton (S)

Department of Archaeogenetics, Max Planck Institute for the Science of Human History, Jena, Germany.

Komathi Sree Ponnandai-Shanmugavel (KS)

Chemistry Faculty, Universidad Autónoma de Yucatán (UADY), Mérida, Yucatán, Mexico.

Alicia Bravo-Acevedo (A)

Blood Bank, UMAE Hospital de Gineco Obstetricia No. 4 "Luis Castelazo Ayala", Instituto Mexicano del Seguro Social (IMSS), Mexico City, Mexico.

Joaquín Zúñiga (J)

Laboratory of Immunobiology and Genetics, Instituto Nacional de Enfermedades Respiratorias Ismael Cosío Villegas, Mexico City, Mexico; Tecnologico de Monterrey, Escuela de Medicina y Ciencias de la Salud, Mexico City, Mexico.

Edmond J Yunis (EJ)

Department of Cancer Immunology and Virology, Dana-Farber Cancer Institute, Boston, MA, USA.

Carolina Bekker-Méndez (C)

Immunology and Infectology Research Unit, Infectology Hospital, Centro Médico Nacional "La Raza", Instituto Mexicano del Seguro Social (IMSS), Mexico City, Mexico.

Julio Granados (J)

Department of Transplantation, Instituto Nacional de Ciencias Médicas y Nutrición "Salvador Zubirán" (INCMNSZ), Mexico City, Mexico. Electronic address: julgrate@yahoo.com.

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Classifications MeSH