Spanish Guidelines for the use of targeted deep sequencing in myelodysplastic syndromes and chronic myelomonocytic leukaemia.

chronic myelomonocytic leukaemia guidelines molecular genetics myelodysplastic syndromes next generation sequencing

Journal

British journal of haematology
ISSN: 1365-2141
Titre abrégé: Br J Haematol
Pays: England
ID NLM: 0372544

Informations de publication

Date de publication:
03 2020
Historique:
received: 06 05 2019
revised: 04 07 2019
accepted: 06 07 2019
pubmed: 18 10 2019
medline: 21 10 2020
entrez: 18 10 2019
Statut: ppublish

Résumé

The landscape of medical sequencing has rapidly changed with the evolution of next generation sequencing (NGS). These technologies have contributed to the molecular characterization of the myelodysplastic syndromes (MDS) and chronic myelomonocytic leukaemia (CMML), through the identification of recurrent gene mutations, which are present in >80% of patients. These mutations contribute to a better classification and risk stratification of the patients. Currently, clinical laboratories include NGS genomic analyses in their routine clinical practice, in an effort to personalize the diagnosis, prognosis and treatment of MDS and CMML. NGS technologies have reduced the cost of large-scale sequencing, but there are additional challenges involving the clinical validation of these technologies, as continuous advances are constantly being made. In this context, it is of major importance to standardize the generation, analysis, clinical interpretation and reporting of NGS data. To that end, the Spanish MDS Group (GESMD) has expanded the present set of guidelines, aiming to establish common quality standards for the adequate implementation of NGS and clinical interpretation of the results, hoping that this effort will ultimately contribute to the benefit of patients with myeloid malignancies.

Identifiants

pubmed: 31621063
doi: 10.1111/bjh.16175
pmc: PMC7064979
doi:

Types de publication

Letter Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

605-622

Subventions

Organisme : Generalitat de Catalunya
Pays : International
Organisme : CERCA Programme/Generalitat de Catalunya
Pays : International
Organisme : Fundació Internacional Josep Carreras
Pays : International
Organisme : Celgene International
Pays : International
Organisme : FEHH (Fundación Española de Hematología y Hemoterapia, 2017)
Pays : International
Organisme : Pethema
Pays : International
Organisme : Instituto de Salud Carlos III
Pays : International
Organisme : Ministerio de Sanidad y Consumo, Spain
ID : PI 11/02519
Pays : International
Organisme : Spanish Association against Cancer
ID : AIO2014
Pays : International
Organisme : Ministerio de Economía y Competitividad of Spanish Central Government
ID : PI16/00159
Pays : International

Informations de copyright

© 2019 The Authors. British Journal of Haematology published by British Society for Haematology and John Wiley & Sons Ltd.

Références

Blood. 2017 Mar 9;129(10):1397-1401
pubmed: 28082444
Br J Haematol. 2007 Nov;139(3):405-14
pubmed: 17910630
Ann Hematol. 2012 Nov;91(11):1713-20
pubmed: 23010802
Hum Mutat. 2011 Apr;32(4):358-68
pubmed: 21412949
J Clin Oncol. 2012 Sep 20;30(27):3376-82
pubmed: 22869879
Eur J Hum Genet. 2016 Oct;24(10):1515
pubmed: 27628564
Leukemia. 2014 Feb;28(2):241-7
pubmed: 24220272
N Engl J Med. 2014 Dec 25;371(26):2477-87
pubmed: 25426838
Blood. 2013 Oct 24;122(17):2943-64
pubmed: 23980065
Blood. 2013 Dec 12;122(25):4021-34
pubmed: 24136165
J Natl Compr Canc Netw. 2017 Jan;15(1):60-87
pubmed: 28040720
Curr Opin Genet Dev. 2017 Feb;42:33-39
pubmed: 28157586
Hum Mutat. 2012 Aug;33(8):1228-38
pubmed: 22505045
Leukemia. 2018 Jul;32(7):1482-1492
pubmed: 29483711
Nat Rev Cancer. 2012 Sep;12(9):599-612
pubmed: 22898539
Leukemia. 2011 Jul;25(7):1147-52
pubmed: 21494260
Blood. 2014 Aug 28;124(9):1513-21
pubmed: 24970933
J Clin Oncol. 2014 Sep 1;32(25):2691-8
pubmed: 25092778
Nat Genet. 2017 Feb;49(2):204-212
pubmed: 27992414
N Engl J Med. 2011 Oct 13;365(15):1384-95
pubmed: 21995386
J Clin Oncol. 2011 May 20;29(15):1971-9
pubmed: 21519010
Nat Med. 2014 Jun;20(6):682-8
pubmed: 24836576
Leukemia. 2017 Sep;31(9):1869-1871
pubmed: 28592887
J Mol Diagn. 2014 Jan;16(1):89-105
pubmed: 24211365
Br J Haematol. 2001 Nov;115(2):309-12
pubmed: 11703325
J Clin Oncol. 2013 Jul 1;31(19):2428-36
pubmed: 23690417
Leukemia. 2019 Aug;33(8):1851-1867
pubmed: 30696948
Haematologica. 2017 Sep;102(9):1502-1510
pubmed: 28642303
Blood. 2016 Sep 8;128(10):1408-17
pubmed: 27385790
Best Pract Res Clin Haematol. 2013 Dec;26(4):387-400
pubmed: 24507815
Clin Cancer Res. 2010 Apr 15;16(8):2246-56
pubmed: 20371679
Genet Med. 2015 May;17(5):405-24
pubmed: 25741868
Mutat Res Rev Mutat Res. 2016 Jul-Sep;769:47-62
pubmed: 27543316
Blood. 2019 Mar 7;133(10):1071-1085
pubmed: 30670445
Hum Mutat. 2009 Jan;30(1):107-14
pubmed: 18693280
Blood. 2014 Sep 11;124(11):1790-8
pubmed: 25006131
Am J Hematol. 2017 Jan;92(1):56-61
pubmed: 27733013
Nature. 2011 Sep 11;478(7367):64-9
pubmed: 21909114
Blood. 2012 Apr 5;119(14):3203-10
pubmed: 22323480
Nat Genet. 2013 Oct;45(10):1232-7
pubmed: 23955599
Blood. 2013 Oct 31;122(18):3169-77
pubmed: 24047651
Leukemia. 2010 May;24(5):1062-5
pubmed: 20182461
Blood. 2016 May 19;127(20):2391-405
pubmed: 27069254
J Mol Diagn. 2017 Jan;19(1):4-23
pubmed: 27993330
Am J Hematol. 2018 Jun;93(6):E152-E154
pubmed: 29575088
J Clin Oncol. 2017 Mar 20;35(9):968-974
pubmed: 28297619
N Engl J Med. 2011 Jun 30;364(26):2496-506
pubmed: 21714648
J Mol Diagn. 2018 Nov;20(6):717-737
pubmed: 30138727
N Engl J Med. 2017 Jul 13;377(2):111-121
pubmed: 28636844
J Clin Oncol. 2010 Aug 20;28(24):3858-65
pubmed: 20644105
Nat Med. 2014 Dec;20(12):1472-8
pubmed: 25326804
Nat Biotechnol. 2011 Jan;29(1):24-6
pubmed: 21221095
Leukemia. 2014 Jan;28(1):78-87
pubmed: 24045501
J Clin Pathol. 2009 Sep;62(9):798-801
pubmed: 19734476
Leuk Res. 2015 Mar;39(3):348-54
pubmed: 25573287
Leukemia. 2011 Jul;25(7):1153-8
pubmed: 21415852
Leukemia. 2017 Feb;31(2):520-522
pubmed: 27795557
Blood. 2012 Apr 12;119(15):3578-84
pubmed: 22389253
Genet Med. 2016 Feb;18(2):128-36
pubmed: 25880439
Blood. 2013 Nov 21;122(22):3616-27; quiz 3699
pubmed: 24030381
Haematologica. 2012 Dec;97(12):1933-6
pubmed: 22875624
J Mol Biol. 1991 Jul 5;220(1):49-65
pubmed: 2067018
J Hematol Oncol. 2012 Mar 21;5:12
pubmed: 22436456
Leukemia. 2013 Jun;27(6):1401-3
pubmed: 23443343
Blood. 2012 Oct 11;120(15):3080-8
pubmed: 22919025
Lancet Haematol. 2015 May;2(5):e212-21
pubmed: 26688096
N Engl J Med. 2014 Dec 25;371(26):2488-98
pubmed: 25426837
Leukemia. 2011 May;25(5):877-9
pubmed: 21339759
Blood. 2017 Jul 27;130(4):424-432
pubmed: 28600339
Lancet Oncol. 2017 Jan;18(1):112-121
pubmed: 27927582
N Engl J Med. 2009 May 28;360(22):2289-301
pubmed: 19474426
Blood. 2013 Oct 17;122(16):2807-11; quiz 2920
pubmed: 23896412
Vox Sang. 2002 Aug;83 Suppl 1:333-5
pubmed: 12617164
Br J Haematol. 2013 Mar;160(5):660-72
pubmed: 23297687
Nat Genet. 2011 Dec 11;44(1):53-7
pubmed: 22158538
Blood. 2015 Jul 2;126(1):9-16
pubmed: 25931582

Auteurs

Laura Palomo (L)

Josep Carreras Leukaemia Research Institute, ICO Badalona-Hospital Germans Trias i Pujol, Universitat Autònoma de Barcelona, Sadalona, Spain.

Mariam Ibáñez (M)

Department of Haematology, Hospital Universitari i Politècnic La Fe, València, Spain.
Centro de Investigacion Biomédica en Red de Cáncer (CIBERONC), Instituto Carlos III, Madrid, Spain.
Departamento de Ciencias Biomédicas, Facultad de Ciencias de la Salud, Universidad CEU Cardenal Herrera, València, Spain.

María Abáigar (M)

Institute of Biomedical Research of Salamanca (IBSAL), Cancer Research Centre (IBMCC-CIC; Univ. of Salamanca-CSIC), Salamanca, Spain.

Iria Vázquez (I)

Haematological Diseases Laboratory, CIMA LAB Diagnostics, University of Navarra, Pamplona, Spain.
Navarra Institute for Health Research (IdiSNA), Pamplona, Spain.

Sara Álvarez (S)

NIMGenetics, Genómica y Medicina, S.L., Madrid, Spain.

Marta Cabezón (M)

Haematology Service, ICO Badalona-Hospital Germans Trias i Pujol, Josep Carreras Leukaemia Research Institute, Badalona, Spain.

Bárbara Tazón-Vega (B)

Department of Haematology, Vall d'Hebron Institute of Oncology, Vall d'Hebron University Hospital, Barcelona, Spain.
Department of Medicine, Universitat Autònoma de Barcelona, Barcelona, Spain.

Inmaculada Rapado (I)

Haematology Department, Hospital Universitario 12 de Octubre, Madrid, Spain.
Haematological Malignancies Clinical Research Unit, CNIO, Madrid, Spain.
Centro de investigación Biomédica en Red Cáncer (CIBERONC), Madrid, Spain.

Francisco Fuster-Tormo (F)

Josep Carreras Leukaemia Research Institute, ICO Badalona-Hospital Germans Trias i Pujol, Universitat Autònoma de Barcelona, Sadalona, Spain.

José Cervera (J)

Department of Haematology, Hospital Universitari i Politècnic La Fe, València, Spain.
Centro de Investigacion Biomédica en Red de Cáncer (CIBERONC), Instituto Carlos III, Madrid, Spain.
Genetics Unit, Hospital Universitario y Politécnico La Fe, Valencia, Spain.

Rocío Benito (R)

Institute of Biomedical Research of Salamanca (IBSAL), Cancer Research Centre (IBMCC-CIC; Univ. of Salamanca-CSIC), Salamanca, Spain.

María J Larrayoz (MJ)

Haematological Diseases Laboratory, CIMA LAB Diagnostics, University of Navarra, Pamplona, Spain.
Navarra Institute for Health Research (IdiSNA), Pamplona, Spain.

Juan C Cigudosa (JC)

NIMGenetics, Genómica y Medicina, S.L., Madrid, Spain.

Lurdes Zamora (L)

Haematology Service, ICO Badalona-Hospital Germans Trias i Pujol, Josep Carreras Leukaemia Research Institute, Badalona, Spain.

David Valcárcel (D)

Department of Haematology, Vall d'Hebron Institute of Oncology, Vall d'Hebron University Hospital, Barcelona, Spain.
Department of Medicine, Universitat Autònoma de Barcelona, Barcelona, Spain.

María T Cedena (MT)

Haematology Department, Hospital Universitario 12 de Octubre, Madrid, Spain.
Haematological Malignancies Clinical Research Unit, CNIO, Madrid, Spain.
Centro de investigación Biomédica en Red Cáncer (CIBERONC), Madrid, Spain.

Pamela Acha (P)

Josep Carreras Leukaemia Research Institute, ICO Badalona-Hospital Germans Trias i Pujol, Universitat Autònoma de Barcelona, Sadalona, Spain.

Jesús M Hernández-Sánchez (JM)

Institute of Biomedical Research of Salamanca (IBSAL), Cancer Research Centre (IBMCC-CIC; Univ. of Salamanca-CSIC), Salamanca, Spain.
University of Salamanca (USAL), Salamanca, Spain.

Marta Fernández-Mercado (M)

Haematological Diseases Laboratory, CIMA LAB Diagnostics, University of Navarra, Pamplona, Spain.
Advanced Genomics Laboratory, Centre for Applied Medical Research (CIMA), University of Navarra, Haemato-Oncology, Pamplona, Spain.
Biomedical Engineering Department, School of Engineering, University of Navarra, San Sebastian, Spain.

Guillermo Sanz (G)

Department of Haematology, Hospital Universitari i Politècnic La Fe, València, Spain.
Centro de Investigacion Biomédica en Red de Cáncer (CIBERONC), Instituto Carlos III, Madrid, Spain.

Jesús M Hernández-Rivas (JM)

Institute of Biomedical Research of Salamanca (IBSAL), Cancer Research Centre (IBMCC-CIC; Univ. of Salamanca-CSIC), Salamanca, Spain.
University of Salamanca (USAL), Salamanca, Spain.
Hospital Universitario de Salamanca, Salamanca, Spain.

María J Calasanz (MJ)

Haematological Diseases Laboratory, CIMA LAB Diagnostics, University of Navarra, Pamplona, Spain.
Navarra Institute for Health Research (IdiSNA), Pamplona, Spain.

Francesc Solé (F)

Josep Carreras Leukaemia Research Institute, ICO Badalona-Hospital Germans Trias i Pujol, Universitat Autònoma de Barcelona, Sadalona, Spain.

Esperanza Such (E)

Department of Haematology, Hospital Universitari i Politècnic La Fe, València, Spain.
Centro de Investigacion Biomédica en Red de Cáncer (CIBERONC), Instituto Carlos III, Madrid, Spain.
Departamento de Ciencias Biomédicas, Facultad de Ciencias de la Salud, Universidad CEU Cardenal Herrera, València, Spain.

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