Unboxing AI - Radiological Insights Into a Deep Neural Network for Lung Nodule Characterization.


Journal

Academic radiology
ISSN: 1878-4046
Titre abrégé: Acad Radiol
Pays: United States
ID NLM: 9440159

Informations de publication

Date de publication:
01 2020
Historique:
received: 03 04 2019
revised: 13 09 2019
accepted: 17 09 2019
pubmed: 19 10 2019
medline: 4 11 2020
entrez: 19 10 2019
Statut: ppublish

Résumé

To explain predictions of a deep residual convolutional network for characterization of lung nodule by analyzing heat maps. A 20-layer deep residual CNN was trained on 1245 Chest CTs from National Lung Screening Trial (NLST) trial to predict the malignancy risk of a nodule. We used occlusion to systematically block regions of a nodule and map drops in malignancy risk score to generate clinical attribution heatmaps on 103 nodules from Lung Image Database Consortium image collection and Image Database Resource Initiative (LIDC-IDRI) dataset, which were analyzed by a thoracic radiologist. The features were described as heat inside nodule -bright areas inside nodule, peripheral heat continuous/interrupted bright areas along nodule contours, heat in adjacent plane -brightness in scan planes juxtaposed with the nodule, satellite heat - a smaller bright spot in proximity to nodule in the same scan plane, heat map larger than nodule bright areas corresponding to the shape of the nodule seen outside the nodule margins and heat in calcification. These six features were assigned binary values. This feature vector was fedinto a standard J48 decision tree with 10-fold cross-validation, which gave an 85 % weighted classification accuracy with a 77.8% True Positive (TP) rate, 8% False Positive (FP) rate for benign cases and 91.8% TP and 22.2% FP rates for malignant cases. Heat Inside nodule was more frequently observed in nodules classified as malignant whereas peripheral heat, heat in adjacent plane, and satellite heat were more commonly seen in nodules classified as benign. We discuss the potential ability of a radiologist to visually parse the deep learning algorithm generated "heat map" to identify features aiding classification.

Identifiants

pubmed: 31623996
pii: S1076-6332(19)30448-9
doi: 10.1016/j.acra.2019.09.015
pii:
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

88-95

Informations de copyright

Copyright © 2019 The Association of University Radiologists. Published by Elsevier Inc. All rights reserved.

Auteurs

Vasantha Kumar Venugopal (VK)

CARING (Centre for Advanced Research in Imaging, Neuroscience and Genomics), Mahajan Imaging, E19, Main Ring Road, Defence Colony, New Delhi 110024, India. Electronic address: drvasanth@mahajanimaging.com.

Kiran Vaidhya (K)

Predible Health, IKP Eden, Bengaluru, Karnataka India.

Murali Murugavel (M)

CARING (Centre for Advanced Research in Imaging, Neuroscience and Genomics), Mahajan Imaging, E19, Main Ring Road, Defence Colony, New Delhi 110024, India.

Abhijith Chunduru (A)

Predible Health, IKP Eden, Bengaluru, Karnataka India.

Vidur Mahajan (V)

CARING (Centre for Advanced Research in Imaging, Neuroscience and Genomics), Mahajan Imaging, E19, Main Ring Road, Defence Colony, New Delhi 110024, India.

Suthirth Vaidya (S)

Predible Health, IKP Eden, Bengaluru, Karnataka India.

Digvijay Mahra (D)

Predible Health, IKP Eden, Bengaluru, Karnataka India.

Akshay Rangasai (A)

Predible Health, IKP Eden, Bengaluru, Karnataka India.

Harsh Mahajan (H)

CARING (Centre for Advanced Research in Imaging, Neuroscience and Genomics), Mahajan Imaging, E19, Main Ring Road, Defence Colony, New Delhi 110024, India.

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