Vertical Distribution and Diversity of Phototrophic Bacteria within a Hot Spring Microbial Mat (Nakabusa Hot Springs, Japan).
16S rRNA gene amplicon sequences
hot springs
microbial diversity
photosynthetic bacteria
vertical distribution
Journal
Microbes and environments
ISSN: 1347-4405
Titre abrégé: Microbes Environ
Pays: Japan
ID NLM: 9710937
Informations de publication
Date de publication:
27 Dec 2019
27 Dec 2019
Historique:
pubmed:
7
11
2019
medline:
11
2
2020
entrez:
6
11
2019
Statut:
ppublish
Résumé
Phototrophic microbial mats are assemblages of vertically layered microbial populations dominated by photosynthetic microorganisms. In order to elucidate the vertical distribution and diversity of phototrophic microorganisms in a hot spring-associated microbial mat in Nakabusa (Japan), we analyzed the 16S rRNA gene amplicon sequences of the microbial mat separated into five depth horizons, and correlated them with microsensor measurements of O
Identifiants
pubmed: 31685759
doi: 10.1264/jsme2.ME19047
pmc: PMC6934398
doi:
Substances chimiques
Bacteriochlorophylls
0
DNA, Bacterial
0
Phycobiliproteins
0
RNA, Ribosomal, 16S
0
Oxygen
S88TT14065
Types de publication
Journal Article
Langues
eng
Sous-ensembles de citation
IM
Pagination
374-387Références
Appl Environ Microbiol. 2006 Jan;72(1):21-7
pubmed: 16391020
Microbes Environ. 2012;27(3):293-9
pubmed: 22446313
Front Microbiol. 2016 Jun 17;7:919
pubmed: 27379049
ISME J. 2012 Mar;6(3):610-8
pubmed: 22134646
Appl Environ Microbiol. 2003 May;69(5):2893-8
pubmed: 12732563
Extremophiles. 2009 Jan;13(1):139-49
pubmed: 19023516
Microbes Environ. 2018 Dec 28;33(4):357-365
pubmed: 30404970
Genome Announc. 2014 Jan 30;2(1):
pubmed: 24482507
Photosynth Res. 2010 Jun;104(2-3):245-55
pubmed: 20130996
Front Microbiol. 2019 May 24;10:1150
pubmed: 31178849
Science. 2007 Jul 27;317(5837):523-6
pubmed: 17656724
Environ Microbiol. 2017 Mar;19(3):1251-1265
pubmed: 28035767
Front Microbiol. 2015 Jul 21;6:726
pubmed: 26257714
Science. 2014 Sep 12;345(6202):1312-7
pubmed: 25214622
ISME J. 2011 Feb;5(2):317-28
pubmed: 20740024
ISME J. 2017 Oct;11(10):2368-2378
pubmed: 28622287
Front Microbiol. 2019 Jan 09;9:3159
pubmed: 30687241
Extremophiles. 2009 Mar;13(2):321-31
pubmed: 19109691
Appl Environ Microbiol. 2003 Dec;69(12):7044-57
pubmed: 14660348
Extremophiles. 2013 Jan;17(1):123-36
pubmed: 23208511
Microbiol Res. 2016 May-Jun;186-187:99-118
pubmed: 27242148
Photosynth Res. 2003;76(1-3):157-71
pubmed: 16228575
Nucleic Acids Res. 2004 Feb 25;32(4):1363-71
pubmed: 14985472
Environ Microbiol. 2011 Aug;13(8):2216-31
pubmed: 21453405
Appl Environ Microbiol. 2016 Jun 30;82(14):4209-4217
pubmed: 27208140
J Gen Appl Microbiol. 2002 Aug;48(4):211-22
pubmed: 12469320
Annu Rev Plant Biol. 2018 Apr 29;69:21-49
pubmed: 29505738
Microbes Environ. 2012;27(4):374-81
pubmed: 22673306
ISME J. 2011 Aug;5(8):1262-78
pubmed: 21697961
Appl Environ Microbiol. 2000 Mar;66(3):1038-49
pubmed: 10698769
Methods Enzymol. 2005;397:166-99
pubmed: 16260291
Int J Syst Evol Microbiol. 2015 May;65(Pt 5):1426-30
pubmed: 25667398
Proc Natl Acad Sci U S A. 2011 Mar 15;108 Suppl 1:4516-22
pubmed: 20534432
BMC Evol Biol. 2017 Dec 28;17(Suppl 2):254
pubmed: 29297382
Int J Syst Bacteriol. 1995 Oct;45(4):676-81
pubmed: 7547286
Environ Microbiol. 2012 Jan;14(1):177-90
pubmed: 21951563
Microbiol Mol Biol Rev. 1998 Dec;62(4):1353-70
pubmed: 9841675
Mikrobiologiia. 2014 Jul-Aug;83(4):484-99
pubmed: 25844460
Int J Syst Evol Microbiol. 2002 Jan;52(Pt 1):187-93
pubmed: 11837302
Int J Syst Evol Microbiol. 2010 Jun;60(Pt 6):1376-82
pubmed: 19671715
Arch Microbiol. 1974;100(1):5-24
pubmed: 4374148
ISME J. 2016 Apr;10(4):833-45
pubmed: 26325358
Microbes Environ. 2018 Mar 29;33(1):10-18
pubmed: 29367473
Syst Appl Microbiol. 2011 Jun;34(4):293-302
pubmed: 21353426
Front Microbiol. 2015 Apr 17;6:209
pubmed: 25941514
Front Microbiol. 2015 Mar 27;6:226
pubmed: 25870589
Front Microbiol. 2013 Jun 03;4:106
pubmed: 23761787
Photochem Photobiol. 2016 Mar;92(2):331-342
pubmed: 26715143
PLoS One. 2018 Jan 30;13(1):e0191650
pubmed: 29381713
Extremophiles. 2015 Nov;19(6):1067-76
pubmed: 26290358
ISME J. 2011 Aug;5(8):1279-90
pubmed: 21697962
Biochem J. 2017 Jun 13;474(13):2107-2131
pubmed: 28611239
Environ Microbiol. 2007 Jan;9(1):26-38
pubmed: 17227409
J Microbiol Biotechnol. 2015 Jun;25(6):765-70
pubmed: 25563415
Archaea. 2013;2013:136714
pubmed: 23533327
ISME J. 2012 Oct;6(10):1869-82
pubmed: 22456447
Nat Methods. 2010 May;7(5):335-6
pubmed: 20383131
Int J Syst Evol Microbiol. 2008 Apr;58(Pt 4):773-8
pubmed: 18398168
Front Microbiol. 2017 Jun 06;8:943
pubmed: 28634470
Front Microbiol. 2018 Feb 19;9:260
pubmed: 29515543