Comprehensive Analysis of the Chitinase Gene Family in Cucumber (
Cucumis sativus
Fusarium oxysporum
chitinase
gene expression
gene family
Journal
International journal of molecular sciences
ISSN: 1422-0067
Titre abrégé: Int J Mol Sci
Pays: Switzerland
ID NLM: 101092791
Informations de publication
Date de publication:
25 Oct 2019
25 Oct 2019
Historique:
received:
20
09
2019
revised:
15
10
2019
accepted:
17
10
2019
entrez:
17
11
2019
pubmed:
17
11
2019
medline:
2
4
2020
Statut:
epublish
Résumé
Chitinases, a subgroup of pathogenesis-related proteins, are responsible for catalyzing the hydrolysis of chitin. Accumulating reports indicate that chitinases play a key role in plant defense against chitin-containing pathogens and are therefore good targets for defense response studies. Here, we undertook an integrated bioinformatic and expression analysis of the cucumber chitinases gene family to identify its role in defense against
Identifiants
pubmed: 31731414
pii: ijms20215309
doi: 10.3390/ijms20215309
pmc: PMC6861899
pii:
doi:
Substances chimiques
Plant Proteins
0
Chitinases
EC 3.2.1.14
Types de publication
Journal Article
Langues
eng
Sous-ensembles de citation
IM
Subventions
Organisme : Beijing Municipal Natural Science Foundation
ID : 6184043
Organisme : National Key Research and Development Program of China
ID : 2018YFD1000800
Organisme : The Construction of Beijing Science and Technology Innovation and Service Capacity in Top Subjects
ID : CEFF-PXM2019_014207_000032
Organisme : Project of Beijing Agricultural Innovation Consortium
ID : BAIC01-2016
Références
BMC Genomics. 2011 Nov 02;12:540
pubmed: 22047402
Glycobiology. 2006 Dec;16(12):1242-50
pubmed: 16957091
Phytopathology. 2005 Mar;95(3):284-91
pubmed: 18943122
Plant Physiol Biochem. 2012 Dec;61:153-61
pubmed: 23103050
Nucleic Acids Res. 2019 Jan 8;47(D1):D427-D432
pubmed: 30357350
Mol Biol Evol. 2018 Jun 1;35(6):1547-1549
pubmed: 29722887
J Exp Bot. 2014 Jul;65(12):3201-13
pubmed: 24790111
Nat Genet. 2003 Apr;33(4):439-40
pubmed: 12665861
Trends Genet. 2008 Aug;24(8):375-8
pubmed: 18586348
Bioinformatics. 2009 Jul 15;25(14):1754-60
pubmed: 19451168
Bioinformatics. 2010 Oct 15;26(20):2620-1
pubmed: 20736339
Genomics Proteomics Bioinformatics. 2012 Apr;10(2):94-106
pubmed: 22768983
Arabidopsis Book. 2002;1:e0023
pubmed: 22303199
Arch Biochem Biophys. 2004 Jun 15;426(2):286-97
pubmed: 15158679
Bioinformatics. 2015 Apr 15;31(8):1296-7
pubmed: 25504850
J Food Biochem. 2019 Feb;43(2):e12713
pubmed: 31353643
Cell Mol Biol Lett. 2003;8(3):809-24
pubmed: 12949620
Plant Physiol. 1990 Jul;93(3):907-14
pubmed: 16667600
Immunobiology. 2016 Mar;221(3):399-411
pubmed: 26686909
Plant J. 2001 Apr;26(2):217-27
pubmed: 11389762
Annu Rev Phytopathol. 1999;37:285-306
pubmed: 11701825
Genome Res. 2010 Sep;20(9):1297-303
pubmed: 20644199
Plant J. 1998 Apr;14(2):225-34
pubmed: 9628018
Plant Physiol. 2006 Oct;142(2):722-30
pubmed: 16891545
Biosci Biotechnol Biochem. 2005 Apr;69(4):852-4
pubmed: 15849431
Genomics. 2020 Jan;112(1):184-198
pubmed: 30695716
Planta. 2001 Mar;212(4):556-67
pubmed: 11525512
Bioinformatics. 2014 Aug 1;30(15):2114-20
pubmed: 24695404
Arabidopsis Book. 2011;9:e0153
pubmed: 22303277
Plant Cell Rep. 2005 Mar;23(12):811-8
pubmed: 15599752
New Phytol. 2001 Feb;149(2):167-192
pubmed: 33874640
Plant Sci. 2001 Feb 5;160(3):405-414
pubmed: 11166426
Tree Physiol. 2017 May 1;37(5):565-582
pubmed: 28338992
Plant Sci. 2014 Feb;215-216:190-8
pubmed: 24388530
Nucleic Acids Res. 2013 Jan;41(Database issue):D344-7
pubmed: 23161676
Nucleic Acids Res. 2019 Jan 8;47(D1):D351-D360
pubmed: 30398656
Biosci Biotechnol Biochem. 2009 May;73(5):1066-71
pubmed: 19420714
Nat Protoc. 2008;3(6):1101-8
pubmed: 18546601
Chemosphere. 2015 Jun;128:231-5
pubmed: 25723715
Mutat Res. 2008 Jul-Aug;659(1-2):147-57
pubmed: 18565787
Nat Protoc. 2010 Feb;5(2):303-22
pubmed: 20134430
Sci Rep. 2016 Jun 29;6:29022
pubmed: 27354165
Planta. 2006 Sep;224(4):740-9
pubmed: 16362326
Mol Plant Pathol. 2002 Jul 1;3(4):197-203
pubmed: 20569327
Sci Rep. 2018 Sep 21;8(1):14218
pubmed: 30242197
Mol Biol Rep. 2004 Jun;31(2):113-9
pubmed: 15293787
Biosci Biotechnol Biochem. 2002 May;66(5):970-7
pubmed: 12092848
Mol Plant Microbe Interact. 2006 Sep;19(9):939-47
pubmed: 16941898
Nucleic Acids Res. 2018 Jul 2;46(W1):W200-W204
pubmed: 29905871
Biosci Rep. 2018 Aug 29;38(4):
pubmed: 30042170
Plant Sci. 2018 May;270:257-267
pubmed: 29576079
Glycobiology. 2011 May;21(5):644-54
pubmed: 21367878
Mol Plant Microbe Interact. 2002 Apr;15(4):380-7
pubmed: 12026177
Tree Physiol. 2012 Oct;32(10):1313-20
pubmed: 22971569
Appl Microbiol Biotechnol. 2009 Nov;85(2):313-21
pubmed: 19547968
Nat Methods. 2012 Mar 04;9(4):357-9
pubmed: 22388286
Plant Cell. 2002 Jan;14(1):165-79
pubmed: 11826306
Nat Genet. 2009 Dec;41(12):1275-81
pubmed: 19881527
Genome Biol. 2006;7(2):R13
pubmed: 16507168
Nucleic Acids Res. 2016 Jan 4;44(D1):D1154-60
pubmed: 26476450
Biotechnol Adv. 2013 Dec;31(8):1786-95
pubmed: 24095741
Mol Biol Evol. 2012 Oct;29(10):2971-85
pubmed: 22490823
Biosci Biotechnol Biochem. 2007 May;71(5):1211-9
pubmed: 17485855
Front Plant Sci. 2016 Jan 12;6:1238
pubmed: 26793216
Nucleic Acids Res. 2017 Jan 4;45(D1):D200-D203
pubmed: 27899674
Nat Methods. 2015 Apr;12(4):357-60
pubmed: 25751142
BMC Plant Biol. 2016 Mar 02;16:58
pubmed: 26935840
Biochim Biophys Acta. 2004 Sep 17;1679(3):279-87
pubmed: 15358520
Nucleic Acids Res. 2002 Jan 1;30(1):325-7
pubmed: 11752327
Annu Rev Phytopathol. 2006;44:135-62
pubmed: 16602946
Plant J. 2009 Aug;59(4):672-83
pubmed: 19392696
FEBS Lett. 1997 Dec 8;419(1):69-75
pubmed: 9426222
Planta. 2008 Mar;227(4):723-40
pubmed: 18046575
Front Plant Sci. 2016 Mar 01;7:244
pubmed: 26973685
Mol Biol Evol. 2007 Oct;24(10):2298-309
pubmed: 17670808
Protein Expr Purif. 2007 Nov;56(1):100-9
pubmed: 17697785
Nucleic Acids Res. 1994 Nov 11;22(22):4673-80
pubmed: 7984417
Bioinformatics. 2006 Jul 15;22(14):e408-16
pubmed: 16873501
J Pharm Bioallied Sci. 2013 Jan;5(1):21-9
pubmed: 23559820
J Hered. 2002 Jan-Feb;93(1):77-8
pubmed: 12011185
Plant Cell Rep. 2000 Jun;19(7):639-646
pubmed: 30754799
Plant Physiol. 2003 Sep;133(1):263-73
pubmed: 12970492
Nucleic Acids Res. 2009 Jul;37(Web Server issue):W202-8
pubmed: 19458158
Biotechnol Lett. 2010 Apr;32(4):539-46
pubmed: 20035370
Nucleic Acids Res. 2014 Jan;42(Database issue):D490-5
pubmed: 24270786
Plant Cell. 2002 Apr;14(4):749-62
pubmed: 11971132
BMC Genomics. 2010 Oct 25;11:600
pubmed: 20973991
Cell Mol Life Sci. 2010 Jan;67(2):201-16
pubmed: 19816755
Methods Mol Biol. 2017;1611:59-73
pubmed: 28451972
J Genet. 2015 Mar;94(1):55-65
pubmed: 25846877