Whole-Genome Sequencing of Corynebacterium diphtheriae Isolates Recovered from an Inner-City Population Demonstrates the Predominance of a Single Molecular Strain.
Bacterial Typing Techniques
Canada
/ epidemiology
Cities
/ epidemiology
Corynebacterium diphtheriae
/ classification
Diphtheria
/ epidemiology
Genome, Bacterial
Humans
Multilocus Sequence Typing
Phylogeny
Poverty
/ statistics & numerical data
Skin
/ microbiology
Virulence Factors
Whole Genome Sequencing
Corynebacterium
DNA sequencing
diphtheria
genome analysis
genomics
molecular epidemiology
molecular subtyping
phylogenetic analysis
plasmid analysis
virulence factors
Journal
Journal of clinical microbiology
ISSN: 1098-660X
Titre abrégé: J Clin Microbiol
Pays: United States
ID NLM: 7505564
Informations de publication
Date de publication:
28 01 2020
28 01 2020
Historique:
received:
05
10
2019
accepted:
18
11
2019
pubmed:
22
11
2019
medline:
7
4
2021
entrez:
22
11
2019
Statut:
epublish
Résumé
In some parts of the world,
Identifiants
pubmed: 31748323
pii: JCM.01651-19
doi: 10.1128/JCM.01651-19
pmc: PMC6989084
pii:
doi:
Substances chimiques
Virulence Factors
0
Types de publication
Journal Article
Langues
eng
Sous-ensembles de citation
IM
Informations de copyright
Copyright © 2020 American Society for Microbiology.
Références
Clin Microbiol Infect. 2016 Dec;22(12):1003.e1-1003.e8
pubmed: 27585943
Bioinformatics. 2015 Nov 15;31(22):3691-3
pubmed: 26198102
J Clin Microbiol. 2006 May;44(5):1625-9
pubmed: 16672385
Bioinformatics. 2014 May 1;30(9):1312-3
pubmed: 24451623
Genome Biol. 2016 Nov 25;17(1):238
pubmed: 27887642
PLoS Comput Biol. 2017 Jun 8;13(6):e1005595
pubmed: 28594827
PLoS One. 2015 Apr 24;10(4):e0121749
pubmed: 25909365
Epidemiol Infect. 2017 Jul;145(10):2100-2108
pubmed: 28478776
BMC Genomics. 2018 Dec 4;19(1):869
pubmed: 30509172
J Infect Dis. 2000 Feb;181 Suppl 1:S10-22
pubmed: 10657185
Bioinformatics. 2014 Jul 15;30(14):2068-9
pubmed: 24642063
Emerg Infect Dis. 2017 Jan;23(1):105-107
pubmed: 27983494
Sci Rep. 2016 Nov 08;6:36213
pubmed: 27824078
J Clin Microbiol. 2019 Apr 26;57(5):
pubmed: 30814269
J Clin Microbiol. 2011 Jul;49(7):2664-6
pubmed: 21525220
Bioinformatics. 2018 Sep 1;34(17):i884-i890
pubmed: 30423086
Bioinformatics. 2016 Oct 1;32(19):3047-8
pubmed: 27312411
Microb Genom. 2018 Mar;4(3):
pubmed: 29543149
Emerg Infect Dis. 2020 Jan;26(1):97-103
pubmed: 31855139
J Comput Biol. 2012 May;19(5):455-77
pubmed: 22506599
Epidemiol Infect. 2015 Mar;143(4):791-8
pubmed: 25703400
Bioinformatics. 2013 Apr 15;29(8):1072-5
pubmed: 23422339
Emerg Infect Dis. 2018 Jul;24(7):1340-1344
pubmed: 29912686
Emerg Infect Dis. 2017 Aug;23(8):1308-1315
pubmed: 28726616
BMC Genomics. 2017 Nov 13;18(1):873
pubmed: 29132312
Euro Surveill. 2016 Dec 1;21(48):
pubmed: 27934582
BMC Bioinformatics. 2010 Mar 08;11:119
pubmed: 20211023
Euro Surveill. 2019 Jan;24(2):
pubmed: 30646974
Nucleic Acids Res. 2019 Jan 8;47(D1):D687-D692
pubmed: 30395255
Emerg Infect Dis. 2018 Jul;24(7):1239-1245
pubmed: 29912709
J Clin Microbiol. 2012 Apr;50(4):1355-61
pubmed: 22238442
Nucleic Acids Res. 2015 Feb 18;43(3):e15
pubmed: 25414349