Designing heterotropically activated allosteric conformational switches using supercharging.


Journal

Proceedings of the National Academy of Sciences of the United States of America
ISSN: 1091-6490
Titre abrégé: Proc Natl Acad Sci U S A
Pays: United States
ID NLM: 7505876

Informations de publication

Date de publication:
10 03 2020
Historique:
pubmed: 27 2 2020
medline: 14 7 2020
entrez: 27 2 2020
Statut: ppublish

Résumé

Heterotropic allosteric activation of protein function, in which binding of one ligand thermodynamically activates the binding of another, different ligand or substrate, is a fundamental control mechanism in metabolism and as such has been a long-aspired capability in protein design. Here we show that greatly increasing the magnitude of a protein's net charge using surface supercharging transforms that protein into an allosteric ligand- and counterion-gated conformational molecular switch. To demonstrate this we first modified the designed helical bundle hemoprotein H4, creating a highly charged protein which both unfolds reversibly at low ionic strength and undergoes the ligand-induced folding transition commonly observed in signal transduction by intrinsically disordered proteins in biology. As a result of the high surface-charge density, ligand binding to this protein is allosterically activated up to 1,300-fold by low concentrations of divalent cations and the polyamine spermine. To extend this process further using a natural protein, we similarly modified

Identifiants

pubmed: 32098845
pii: 1916046117
doi: 10.1073/pnas.1916046117
pmc: PMC7071918
doi:

Substances chimiques

Cations, Divalent 0
Cytochrome b Group 0
Escherichia coli Proteins 0
Hemeproteins 0
Intrinsically Disordered Proteins 0
Ligands 0
Spermine 2FZ7Y3VOQX
cytochrome b562, E coli 9064-79-3
Magnesium I38ZP9992A
Calcium SY7Q814VUP

Types de publication

Journal Article Research Support, N.I.H., Extramural Research Support, Non-U.S. Gov't Research Support, U.S. Gov't, Non-P.H.S.

Langues

eng

Sous-ensembles de citation

IM

Pagination

5291-5297

Subventions

Organisme : NIMHD NIH HHS
ID : G12 MD007603
Pays : United States
Organisme : NIGMS NIH HHS
ID : R01 GM111932
Pays : United States

Déclaration de conflit d'intérêts

The authors declare no competing interest.

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Auteurs

Peter J Schnatz (PJ)

Department of Physics, The City College of New York, New York, NY 10031.

Joseph M Brisendine (JM)

Department of Biochemistry, The City College of New York, New York, NY 10031.

Craig C Laing (CC)

Department of Physics, The City College of New York, New York, NY 10031.

Bernard H Everson (BH)

Department of Physics, The City College of New York, New York, NY 10031.

Cooper A French (CA)

Department of Biochemistry, The City College of New York, New York, NY 10031.

Paul M Molinaro (PM)

Department of Physics, The City College of New York, New York, NY 10031.

Ronald L Koder (RL)

Department of Physics, The City College of New York, New York, NY 10031; rkoder@ccny.cuny.edu.
Graduate Program of Physics, The Graduate Center, The City University of New York, New York, NY 10016.
Graduate Program of Biology, The Graduate Center, The City University of New York, New York, NY 10016.
Graduate Program of Biochemistry, The Graduate Center, The City University of New York, New York, NY 10016.
Graduate Program of Chemistry, The Graduate Center, The City University of New York, New York NY 10016.

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Classifications MeSH