Taxonomy of prokaryotic viruses: 2018-2019 update from the ICTV Bacterial and Archaeal Viruses Subcommittee.

Archaea / virology Archaeal Viruses / classification Bacteria / virology Bacteriophages / classification Classification / methods

Journal

Archives of virology
ISSN: 1432-8798
Titre abrégé: Arch Virol
Pays: Austria
ID NLM: 7506870

Informations de publication

Date de publication:
May 2020
Historique:
pubmed: 13 3 2020
medline: 22 4 2020
entrez: 13 3 2020
Statut: ppublish

Résumé

This article is a summary of the activities of the ICTV's Bacterial and Archaeal Viruses Subcommittee for the years 2018 and 2019. Highlights include the creation of a new order, 10 families, 22 subfamilies, 424 genera and 964 species. Some of our concerns about the ICTV's ability to adjust to and incorporate new DNA- and protein-based taxonomic tools are discussed.

Identifiants

DOI: 10.1007/s00705-020-04577-8 PMID: 32162068
pubmed: 32162068
doi: 10.1007/s00705-020-04577-8
pii: 10.1007/s00705-020-04577-8
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

1253-1260

Subventions

Organisme : UK Biotechnology and Biological Sciences Research Council
ID : BBS/E/F/000PR10353
Organisme : Netherlands Organization for Scientific Research
ID : Vidi Grant 864.14.004
Organisme : National Science Foundation
ID : MCB-1330800

Auteurs

Evelien M Adriaenssens (EM)

Quadram Institute Bioscience, Norwich Research Park, Norwich, Norfolk, NR4 7UQ, UK.
ORCID: 0000-0003-4826-5406

Matthew B Sullivan (MB)

Department of Microbiology and Civil, Environmental and Geodetic Engineering, The Ohio State University, Columbus, OH, 43210, USA.
ORCID: 0000-0003-4040-9831

Petar Knezevic (P)

Department of Biology and Ecology, Faculty of Sciences, University of Novi Sad, Novi Sad, Serbia.
ORCID: 0000-0003-0353-3892

Leonardo J van Zyl (LJ)

Department of Biotechnology, Institute for Microbial Biotechnology and Metagenomics (IMBM), University of the Western Cape, Bellville, Cape Town, 7535, South Africa.
ORCID: 0000-0001-9364-8671

B L Sarkar (BL)

ICMR-National Institute of Cholera and Enteric Diseases, P-33, C.I.T. Road, Scheme XM, Beleghata, Kolkata, 700010, India.

Bas E Dutilh (BE)

Theoretical Biology and Bioinformatics, Utrecht University, Utrecht, The Netherlands.
Centre for Molecular and Biomolecular Informatics, Radboud University Medical Centre, Nijmegen, The Netherlands.
ORCID: 0000-0003-2329-7890

Poliane Alfenas-Zerbini (P)

Laboratory of Industrial Microbiology, Instituto de Biotecnologia Aplicada à Agropecuária, Universidade Federal de Viçosa, Viçosa, Minas Gerais, Brazil.
ORCID: 0000-0002-8203-5244

Małgorzata Łobocka (M)

Department of Microbial Biochemistry, Institute of Biochemistry and Biophysics of the Polish Academy of Sciences, 02-106, Warsaw, Poland.
ORCID: 0000-0003-0679-5193

Yigang Tong (Y)

College of Life Science and Technology, Beijing University of Chemical Technology, Beijing, 100029, China.
ORCID: 0000-0002-8503-8045

James Rodney Brister (JR)

National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, MD, 20894, USA.
ORCID: 0000-0003-4729-6796

Andrea I Moreno Switt (AI)

Faculty of Life Sciences, Universidad Andres Bello, Republica 440, 8370146, Santiago, Chile.
ORCID: 0000-0001-8231-9397

Jochen Klumpp (J)

Institute of Food, Nutrition and Health, ETH Zurich, 8092, Zurich, Switzerland.
ORCID: 0000-0003-3410-2702

Ramy Karam Aziz (RK)

Department of Microbiology and Immunology, Faculty of Pharmacy, Cairo University, Qasr El-Ainy St, Cairo, 11562, Egypt.
ORCID: 0000-0002-4448-7100

Jakub Barylski (J)

Department of Molecular Virology, Institute of Experimental Biology, Adam Mickiewicz University, Poznan, Poland.
ORCID: 0000-0001-6630-6932

Jumpei Uchiyama (J)

School of Veterinary Medicine, Azabu University, Fuchinobe 1-17-71, Chuo-ku, Sagamihara, Kanagawa, 252-0206, Japan.
ORCID: 0000-0003-0846-0100

Rob A Edwards (RA)

Department of Computer Science, San Diego State University, San Diego, CA, 92182, USA.
Department of Biology, San Diego State University, San Diego, CA, 92182, USA.
ORCID: 0000-0001-8383-8949

Andrew M Kropinski (AM)

Food Science Department, University of Guelph, 50 Stone Road East, Guelph, ON, N1G 2W1, Canada. Phage.Canada@gmail.com.
Department of Pathobiology, Ontario Veterinary College, University of Guelph, 50 Stone Road E, Guelph, ON, N1G 2W1, Canada. Phage.Canada@gmail.com.
ORCID: 0000-0002-6871-6799

Nicola K Petty (NK)

The ithree Institute, University of Technology Sydney, Sydney, NSW, 2007, Australia.
ORCID: 0000-0001-6528-9886

Martha R J Clokie (MRJ)

Department of Infection, Immunity and Inflammation, University of Leicester, Leicester, LE1 9HN, UK.
ORCID: 0000-0002-6069-8936

Alla I Kushkina (AI)

Department of Bacteriophage Molecular Genetics, D.K. Zabolotny Institute of Microbiology and Virology, the NAS of Ukraine, 154 Acad.Zabolotny str, Kyiv, 03143, Ukraine.
ORCID: 0000-0002-2206-7324

Vera V Morozova (VV)

Institute of Chemical Biology and Fundamental Medicine (RAS), Novosibirsk, Russia.
ORCID: 0000-0002-0869-3476

Siobain Duffy (S)

Department of Ecology, Evolution and Natural Resources, Rutgers University, New Brunswick, NJ, 08901, USA.
ORCID: 0000-0003-0753-223X

Annika Gillis (A)

Section of Molecular Microbiology and Medical Research Council Centre for Molecular Bacteriology and Infection, Imperial College London, London, SW72AZ, UK.
ORCID: 0000-0002-6735-3359

Janis Rumnieks (J)

Latvian Biomedical Research and Study Center, Ratsupites 1, Riga, 1067, Latvia.
ORCID: 0000-0001-8436-9910

İpek Kurtböke (İ)

Genecology Research Centre, School of Science and Engineering, University of the Sunshine Coast, Maroochydore DC, QLD, 4558, Australia.
ORCID: 0000-0003-2056-2484

Nina Chanishvili (N)

G. Eliava Institute of Bacteriophages, Microbiology and Virology, 3 Gotua Street, 0160, Tbilisi, Georgia.
ORCID: 0000-0002-7859-3032

Lawrence Goodridge (L)

Food Science Department, University of Guelph, 50 Stone Road East, Guelph, ON, N1G 2W1, Canada.
ORCID: 0000-0002-5137-1456

Johannes Wittmann (J)

Leibniz Institute DSMZ-German Collection of Microorganisms and Cell Cultures GmbH, 38124, Brunswick, Germany.
ORCID: 0000-0002-7275-9927

Rob Lavigne (R)

Laboratory of Gene Technology, Department of Biosystems, KU Leuven, Kasteelpark Arenberg 21 box 2462, 3001, Leuven, Belgium.
ORCID: 0000-0001-7377-1314

Ho Bin Jang (HB)

Department of Microbiology, The Ohio State University, Columbus, OH, 43210, USA.
ORCID: 0000-0003-1316-316X

David Prangishvili (D)

Archaeal Virology Unit, Department of Microbiology, Institut Pasteur, 75015, Paris, France.
Ivane Javakhishvili Tbilisi State University, 0179, Tbilisi, Georgia.
ORCID: 0000-0002-0812-9699

Francois Enault (F)

Université Clermont Auvergne, CNRS, LMGE, 63000, Clermont-Ferrand, France.
ORCID: 0000-0002-4968-3995

Dann Turner (D)

Faculty of Health and Applied Sciences, University of the West of England, Bristol, Frenchay Campus, Bristol, BS16 1QY, UK.
ORCID: 0000-0002-0249-4513

Minna M Poranen (MM)

Molecular and Integrative Biosciences Research Programme, Faculty of Biological and Environmental Sciences, University of Helsinki, Helsinki, Finland.
ORCID: 0000-0002-4775-3670

Hanna M Oksanen (HM)

Molecular and Integrative Biosciences Research Programme, Faculty of Biological and Environmental Sciences, University of Helsinki, Helsinki, Finland.
ORCID: 0000-0003-3047-8294

Mart Krupovic (M)

Archaeal Virology Unit, Department of Microbiology, Institut Pasteur, 75015, Paris, France.
ORCID: 0000-0001-5486-0098

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