Matching Reads to Many Genomes with the

Databases, Genetic Genome / genetics Genomics Humans Sequence Alignment / methods Sequence Analysis, DNA / methods Software
Burrows–Wheeler Transform indexing pan-genomics r-index

Journal

Journal of computational biology : a journal of computational molecular cell biology
ISSN: 1557-8666
Titre abrégé: J Comput Biol
Pays: United States
ID NLM: 9433358

Informations de publication

Date de publication:
04 2020
Historique:
pubmed: 18 3 2020
medline: 28 7 2021
entrez: 18 3 2020
Statut: ppublish

Résumé

The

Identifiants

DOI: 10.1089/cmb.2019.0316 PMID: 32181686 PMC: PMC7185317
pubmed: 32181686
doi: 10.1089/cmb.2019.0316
pmc: PMC7185317
doi:

Types de publication

Journal Article Research Support, N.I.H., Extramural Research Support, Non-U.S. Gov't Research Support, U.S. Gov't, Non-P.H.S.

Langues

eng

Sous-ensembles de citation

IM

Pagination

514-518

Subventions

Organisme : NIAID NIH HHS
ID : R01 AI141810
Pays : United States
Organisme : NIGMS NIH HHS
ID : R01 GM118568
Pays : United States

Références

J Comput Biol. 2010 Mar;17(3):281-308
pubmed: 20377446
Bioinformatics. 2009 Aug 15;25(16):2078-9
pubmed: 19505943
Nucleic Acids Res. 2012 Jan;40(Database issue):D593-8
pubmed: 22006842
Bioinformatics. 2009 Jul 15;25(14):1754-60
pubmed: 19451168
Algorithms Mol Biol. 2019 May 24;14:13
pubmed: 31149025
Genome Biol. 2009;10(3):R25
pubmed: 19261174

Auteurs

Taher Mun (T)

Department of Computer Science, Johns Hopkins University, Baltimore, Maryland.

Alan Kuhnle (A)

Department of Computer and Information Science and Engineering, University of Florida, Gainesville, Florida.

Christina Boucher (C)

Department of Computer and Information Science and Engineering, University of Florida, Gainesville, Florida.

Travis Gagie (T)

Faculty of Computer Science, Dalhousie University, Halifax, Canada Center for Biotechnology and Bioengineering, Santiago, Chile School of Computer Science and Telecommunications, Universidad Diego Portales, Santiago, Chile.

Ben Langmead (B)

Department of Computer Science, Johns Hopkins University, Baltimore, Maryland.

Giovanni Manzini (G)

Department of Science and Technological Innovation, University of Eastern Piedmont, Alessandria, Italy.

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Classifications MeSH

questionsmedicales.fr › Sciences de l'information › Mémorisation et recherche des informations › Bases de données comme sujet › Bases de données factuelles › Bases de données génétiques › Matching Reads to Many Genomes with the
questionsmedicales.fr › Phénomènes génétiques › Structures génétiques › Génome › Matching Reads to Many Genomes with the
questionsmedicales.fr › Disciplines des sciences naturelles › Disciplines des sciences biologiques › Biologie › Génétique › Génomique › Matching Reads to Many Genomes with the
questionsmedicales.fr › Eucaryotes › Animaux › Chordés › Vertébrés › Mammifères › Eutheria › Primates › Haplorhini › Catarrhini › Hominidae › Humains › Matching Reads to Many Genomes with the
questionsmedicales.fr › Techniques d'investigation › Techniques génétiques › Alignement de séquences › Matching Reads to Many Genomes with the
questionsmedicales.fr › Techniques d'investigation › Techniques génétiques › Analyse de séquence › Analyse de séquence d'ADN › Matching Reads to Many Genomes with the
questionsmedicales.fr › Sciences de l'information › Méthodologies informatiques › Logiciel › Matching Reads to Many Genomes with the