Subunit Interaction Dynamics of Class Ia Ribonucleotide Reductases: In Search of a Robust Assay.


Journal

Biochemistry
ISSN: 1520-4995
Titre abrégé: Biochemistry
Pays: United States
ID NLM: 0370623

Informations de publication

Date de publication:
14 04 2020
Historique:
pubmed: 19 3 2020
medline: 11 11 2020
entrez: 19 3 2020
Statut: ppublish

Résumé

Ribonucleotide reductases (RNRs) catalyze the conversion of nucleotides (NDP) to deoxynucleotides (dNDP), in part, by controlling the ratios and quantities of dNTPs available for DNA replication and repair. The active form of

Identifiants

pubmed: 32186371
doi: 10.1021/acs.biochem.0c00001
pmc: PMC7160020
mid: NIHMS1067396
doi:

Substances chimiques

Escherichia coli Proteins 0
Nucleotides 0
NrdB protein, E coli EC 1.17.4.-
Ribonucleotide Reductases EC 1.17.4.-
NrdA protein, E coli EC 1.17.4.1
Ribonucleoside Diphosphate Reductase EC 1.17.4.1

Types de publication

Journal Article Research Support, N.I.H., Extramural Research Support, U.S. Gov't, Non-P.H.S.

Langues

eng

Sous-ensembles de citation

IM

Pagination

1442-1453

Subventions

Organisme : NIGMS NIH HHS
ID : R01 GM029595
Pays : United States
Organisme : NIGMS NIH HHS
ID : R01 GM047274
Pays : United States

Références

Antiviral Res. 2006 Sep;71(2-3):122-6
pubmed: 16621038
Biochemistry. 1992 Oct 13;31(40):9733-43
pubmed: 1382592
J Biol Chem. 2008 Dec 19;283(51):35310-8
pubmed: 18835811
Proc Natl Acad Sci U S A. 2012 Jun 19;109(25):9798-803
pubmed: 22665797
Proc Natl Acad Sci U S A. 2011 Jun 14;108(24):9815-20
pubmed: 21628579
Biochemistry. 2003 Sep 2;42(34):10071-83
pubmed: 12939135
Proc Natl Acad Sci U S A. 2018 May 15;115(20):E4594-E4603
pubmed: 29712847
J Am Chem Soc. 2007 Dec 5;129(48):15060-71
pubmed: 17990884
Curr Med Chem. 2005;12(11):1283-94
pubmed: 15974997
J Am Chem Soc. 2015 Nov 18;137(45):14387-95
pubmed: 26492582
Biochemistry. 2008 Dec 9;47(49):13046-55
pubmed: 19012414
J Am Chem Soc. 2011 Jun 22;133(24):9430-40
pubmed: 21612216
J Biol Chem. 1973 Jul 10;248(13):4591-601
pubmed: 4578086
Anal Biochem. 1970 Mar;34:123-30
pubmed: 5440901
Structure. 2012 Aug 8;20(8):1374-83
pubmed: 22727814
J Biol Chem. 2004 Jul 23;279(30):31050-7
pubmed: 15145955
Proc Natl Acad Sci U S A. 2011 Dec 27;108(52):21046-51
pubmed: 22160671
Proc Natl Acad Sci U S A. 1989 Mar;86(5):1485-9
pubmed: 2493643
J Mol Biol. 2006 Jun 2;359(2):365-77
pubmed: 16631785
Proc Natl Acad Sci U S A. 2013 Mar 5;110(10):3835-40
pubmed: 23431160
Anal Biochem. 1990 Aug 15;189(1):138-41
pubmed: 2278383
Methods Enzymol. 1995;258:278-303
pubmed: 8524156
Chem Rev. 1998 Apr 2;98(2):705-762
pubmed: 11848913
Nature. 1994 Aug 18;370(6490):533-9
pubmed: 8052308
Biochemistry. 2006 Oct 10;45(40):12282-94
pubmed: 17014081
Curr Cancer Drug Targets. 2006 Aug;6(5):409-31
pubmed: 16918309
J Biol Chem. 2014 Feb 28;289(9):6259-72
pubmed: 24381172
Nat Commun. 2019 Jun 14;10(1):2653
pubmed: 31201319
Chem Rev. 2003 Jun;103(6):2167-201
pubmed: 12797828
J Biol Chem. 1976 Jun 25;251(12):3616-22
pubmed: 776972
J Biol Chem. 2018 Jun 29;293(26):10404-10412
pubmed: 29700111
Annu Rev Biochem. 1998;67:71-98
pubmed: 9759483
J Biol Chem. 1973 Nov 10;248(21):7464-72
pubmed: 4355582
J Am Chem Soc. 2010 Jun 23;132(24):8385-97
pubmed: 20518462
Biochemistry. 2008 Apr 1;47(13):3989-99
pubmed: 18314964
J Biol Chem. 1996 Aug 23;271(34):20655-9
pubmed: 8702814
J Biol Chem. 2006 Sep 22;281(38):27705-11
pubmed: 16861739
J Biol Chem. 1989 Jul 25;264(21):12249-52
pubmed: 2663852
J Mol Biol. 1969 Nov 28;46(1):25-38
pubmed: 4902211
Biochemistry. 1991 May 28;30(21):5164-71
pubmed: 2036382
Biochemistry. 2014 Feb 4;53(4):766-76
pubmed: 24401092
Biochemistry. 1997 Dec 2;36(48):14985-91
pubmed: 9398223
J Bacteriol. 1985 Jul;163(1):238-42
pubmed: 2989245
J Biol Inorg Chem. 2014 Aug;19(6):893-902
pubmed: 24585102
J Biol Chem. 2017 Jun 2;292(22):9136-9149
pubmed: 28411237
Eur J Biochem. 1969 Jul;9(4):561-73
pubmed: 4896737
Biochemistry. 1992 May 26;31(20):4801-7
pubmed: 1591241

Auteurs

Kanchana Ravichandran (K)

Department of Chemistry, Massachusetts Institute of Technology, 77 Massachusetts Avenue, Cambridge, Massachusetts 02139, United States.

Lisa Olshansky (L)

Department of Chemistry, Massachusetts Institute of Technology, 77 Massachusetts Avenue, Cambridge, Massachusetts 02139, United States.
Department of Chemistry and Chemical Biology, Harvard University, 12 Oxford Street, Cambridge, Massachusetts 02138, United States.

Daniel G Nocera (DG)

Department of Chemistry and Chemical Biology, Harvard University, 12 Oxford Street, Cambridge, Massachusetts 02138, United States.

JoAnne Stubbe (J)

Department of Chemistry, Massachusetts Institute of Technology, 77 Massachusetts Avenue, Cambridge, Massachusetts 02139, United States.
Department of Biology, Massachusetts Institute of Technology, 77 Massachusetts Avenue, Cambridge, Massachusetts 02139, United States.

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Classifications MeSH