Machine Learning Uncovers Food- and Excipient-Drug Interactions.
ATP Binding Cassette Transporter, Subfamily B, Member 1
/ metabolism
Abietanes
/ chemistry
Animals
Biological Assay
Diterpenes
/ pharmacology
Drug Interactions
Excipients
/ chemistry
Female
Food
Glucuronosyltransferase
/ antagonists & inhibitors
Hep G2 Cells
Humans
Machine Learning
Mice, Inbred BALB C
Pharmaceutical Preparations
/ metabolism
Retinyl Esters
/ pharmacology
Swine
United States
United States Food and Drug Administration
data science
drug delivery
excipient-drug interactions
food-drug interactions
inactive ingredients
machine learning
pharmacokinetics
pharmacology
virtual screening
Journal
Cell reports
ISSN: 2211-1247
Titre abrégé: Cell Rep
Pays: United States
ID NLM: 101573691
Informations de publication
Date de publication:
17 03 2020
17 03 2020
Historique:
received:
08
07
2019
revised:
06
01
2020
accepted:
26
02
2020
entrez:
19
3
2020
pubmed:
19
3
2020
medline:
24
3
2021
Statut:
ppublish
Résumé
Inactive ingredients and generally recognized as safe compounds are regarded by the US Food and Drug Administration (FDA) as benign for human consumption within specified dose ranges, but a growing body of research has revealed that many inactive ingredients might have unknown biological effects at these concentrations and might alter treatment outcomes. To speed up such discoveries, we apply state-of-the-art machine learning to delineate currently unknown biological effects of inactive ingredients-focusing on P-glycoprotein (P-gp) and uridine diphosphate-glucuronosyltransferase-2B7 (UGT2B7), two proteins that impact the pharmacokinetics of approximately 20% of FDA-approved drugs. Our platform identifies vitamin A palmitate and abietic acid as inhibitors of P-gp and UGT2B7, respectively; in silico, in vitro, ex vivo, and in vivo validations support these interactions. Our predictive framework can elucidate biological effects of commonly consumed chemical matter with implications on food- and excipient-drug interactions and functional drug formulation development.
Identifiants
pubmed: 32187543
pii: S2211-1247(20)30268-0
doi: 10.1016/j.celrep.2020.02.094
pmc: PMC7179333
mid: NIHMS1578467
pii:
doi:
Substances chimiques
ATP Binding Cassette Transporter, Subfamily B, Member 1
0
Abietanes
0
Diterpenes
0
Excipients
0
Pharmaceutical Preparations
0
Retinyl Esters
0
retinol palmitate
1D1K0N0VVC
UGT2B7 protein, human
EC 2.4.1.-
Glucuronosyltransferase
EC 2.4.1.17
abietic acid
V3DHX33184
Types de publication
Journal Article
Research Support, N.I.H., Extramural
Research Support, Non-U.S. Gov't
Langues
eng
Sous-ensembles de citation
IM
Pagination
3710-3716.e4Subventions
Organisme : NIBIB NIH HHS
ID : R01 EB000244
Pays : United States
Organisme : NIBIB NIH HHS
ID : R37 EB000244
Pays : United States
Informations de copyright
Copyright © 2020 The Author(s). Published by Elsevier Inc. All rights reserved.
Déclaration de conflit d'intérêts
Declaration of Interests Complete details of all relationships for profit and not for profit for G.T. can be found at the following link: https://www.dropbox.com/sh/szi7vnr4a2ajb56/AABs5N5i0q9AfT1IqIJAE-T5a?dl=0. Complete details for R.L. can be found at the following link: https://www.dropbox.com/s/yc3xqb5s8s94v7x/Rev%20Langer%20COI.pdf?dl=0. D.R., R.L., and G.T. are co-inventors on a provisional patent application encompassing systems and algorithms capable of quantifying and providing IIG burden in medications and their potential biological implications.
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