Defining metrics for whole-genome sequence analysis of MRSA in clinical practice.
Bacterial Proteins
/ genetics
Computational Biology
/ methods
High-Throughput Nucleotide Sequencing
Humans
Methicillin-Resistant Staphylococcus aureus
/ genetics
Penicillin-Binding Proteins
/ genetics
Polymorphism, Single Nucleotide
Staphylococcal Infections
/ microbiology
United Kingdom
Whole Genome Sequencing
/ methods
Workflow
MRSA
quality metrics
translational
whole-genome sequencing
Journal
Microbial genomics
ISSN: 2057-5858
Titre abrégé: Microb Genom
Pays: England
ID NLM: 101671820
Informations de publication
Date de publication:
04 2020
04 2020
Historique:
pubmed:
2
4
2020
medline:
27
1
2021
entrez:
2
4
2020
Statut:
ppublish
Résumé
Bacterial sequencing will become increasingly adopted in routine microbiology laboratories. Here, we report the findings of a technical evaluation of almost 800 clinical methicillin-resistant
Identifiants
pubmed: 32228804
doi: 10.1099/mgen.0.000354
pmc: PMC7276698
doi:
Substances chimiques
Bacterial Proteins
0
Penicillin-Binding Proteins
0
mecA protein, Staphylococcus aureus
0
Types de publication
Journal Article
Research Support, Non-U.S. Gov't
Langues
eng
Sous-ensembles de citation
IM
Subventions
Organisme : Wellcome Trust
ID : WT098600
Pays : United Kingdom
Organisme : Department of Health
Pays : United Kingdom
Organisme : Wellcome Trust
ID : 201344/Z/16/Z
Pays : United Kingdom
Organisme : Wellcome Trust
Pays : United Kingdom
Organisme : Wellcome Trust
ID : 098051
Pays : United Kingdom
Références
Lancet Infect Dis. 2017 Feb;17(2):207-214
pubmed: 27863959
Gigascience. 2020 Feb 1;9(2):
pubmed: 32025702
J Clin Microbiol. 2019 May 24;57(6):
pubmed: 30894439
Microbiology (Reading). 2018 Oct;164(10):1213-1219
pubmed: 30052172
Genome Res. 2016 Feb;26(2):263-70
pubmed: 26672018
Euro Surveill. 2019 Jan;24(4):
pubmed: 30696529
Genome Biol. 2015 Apr 23;16:81
pubmed: 25903077
J Antimicrob Chemother. 2019 Aug 1;74(8):2153-2156
pubmed: 31039248
Genome Res. 2015 Jan;25(1):111-8
pubmed: 25491771
Lancet Infect Dis. 2013 Feb;13(2):130-6
pubmed: 23158674
BMJ Open. 2012 Jun 06;2(3):
pubmed: 22674929
Clin Infect Dis. 2018 Mar 5;66(6):840-848
pubmed: 29095965
Sci Transl Med. 2017 Oct 25;9(413):
pubmed: 29070701
N Engl J Med. 2012 Jun 14;366(24):2267-75
pubmed: 22693998
J Antimicrob Chemother. 2014 Aug;69(8):2238-45
pubmed: 24788657
Front Microbiol. 2018 Mar 20;9:511
pubmed: 29616014
J Clin Microbiol. 2017 Aug;55(8):2502-2520
pubmed: 28592550
J Clin Microbiol. 2019 Oct 23;57(11):
pubmed: 31462548