"
Anaerobiosis
Archaea
/ classification
Bacteria
/ classification
Biomarkers
Energy Metabolism
Ethane
/ metabolism
Genome, Archaeal
Genomics
/ methods
Geologic Sediments
/ microbiology
Hydrothermal Vents
/ microbiology
Metabolic Networks and Pathways
Molecular Typing
Oxidation-Reduction
Phylogeny
RNA, Ribosomal, 16S
/ genetics
alkane degradation
archaea
hydrothermal vents
methyl-coenzyme M reductase
model organism
syntrophy
Journal
mBio
ISSN: 2150-7511
Titre abrégé: mBio
Pays: United States
ID NLM: 101519231
Informations de publication
Date de publication:
21 04 2020
21 04 2020
Historique:
entrez:
23
4
2020
pubmed:
23
4
2020
medline:
20
11
2020
Statut:
epublish
Résumé
Cold seeps and hydrothermal vents deliver large amounts of methane and other gaseous alkanes into marine surface sediments. Consortia of archaea and partner bacteria thrive on the oxidation of these alkanes and its coupling to sulfate reduction. The inherently slow growth of the involved organisms and the lack of pure cultures have impeded the understanding of the molecular mechanisms of archaeal alkane degradation. Here, using hydrothermal sediments of the Guaymas Basin (Gulf of California) and ethane as the substrate, we cultured microbial consortia of a novel anaerobic ethane oxidizer, "
Identifiants
pubmed: 32317322
pii: mBio.00600-20
doi: 10.1128/mBio.00600-20
pmc: PMC7175092
pii:
doi:
Substances chimiques
Biomarkers
0
RNA, Ribosomal, 16S
0
Ethane
L99N5N533T
Types de publication
Journal Article
Research Support, Non-U.S. Gov't
Research Support, U.S. Gov't, Non-P.H.S.
Langues
eng
Sous-ensembles de citation
IM
Informations de copyright
Copyright © 2020 Hahn et al.
Références
Front Microbiol. 2016 Jan 07;6:1510
pubmed: 26779165
Nucleic Acids Res. 2016 Jul 8;44(W1):W242-5
pubmed: 27095192
Nature. 2015 Oct 22;526(7574):587-90
pubmed: 26490622
Annu Rev Microbiol. 2009;63:311-34
pubmed: 19575572
Nucleic Acids Res. 2013 Jan;41(Database issue):D590-6
pubmed: 23193283
Proc Natl Acad Sci U S A. 2011 Dec 27;108(52):E1484-90
pubmed: 22160711
Front Microbiol. 2013 Dec 12;4:386
pubmed: 24376442
Proc Natl Acad Sci U S A. 2006 Oct 3;103(40):14684-9
pubmed: 16990430
J Comput Biol. 2013 Oct;20(10):714-37
pubmed: 24093227
Nat Microbiol. 2019 Apr;4(4):603-613
pubmed: 30833729
Front Microbiol. 2016 Jan 29;7:17
pubmed: 26858698
Environ Microbiol. 2007 Jan;9(1):187-96
pubmed: 17227423
J Biotechnol. 2017 Nov 10;261:169-176
pubmed: 28648396
Environ Microbiol. 2016 Sep;18(9):3073-91
pubmed: 26971539
Front Microbiol. 2016 Feb 02;7:46
pubmed: 26870011
Nat Commun. 2017 Jul 20;8(1):84
pubmed: 28729688
Nature. 2000 Oct 5;407(6804):623-6
pubmed: 11034209
Nucleic Acids Res. 2014 Jan;42(Database issue):D643-8
pubmed: 24293649
Nucleic Acids Res. 2004 Feb 25;32(4):1363-71
pubmed: 14985472
Front Microbiol. 2013 May 14;4:110
pubmed: 23717305
ISME J. 2018 Jan;12(1):48-58
pubmed: 28872631
mBio. 2019 Aug 20;10(4):
pubmed: 31431553
Nature. 2013 Aug 29;500(7464):567-70
pubmed: 23892779
Bioinformatics. 2014 May 1;30(9):1312-3
pubmed: 24451623
ISME J. 2011 Dec;5(12):1946-56
pubmed: 21697963
Nat Commun. 2018 Nov 27;9(1):4999
pubmed: 30479325
Nat Protoc. 2018 Jun;13(6):1310-1330
pubmed: 29773905
Nat Biotechnol. 2011 May;29(5):415-20
pubmed: 21552244
Nature. 2012 Nov 22;491(7425):541-6
pubmed: 23135396
Environ Microbiol. 2018 May;20(5):1651-1666
pubmed: 29468803
Bioinformatics. 2012 Jul 15;28(14):1823-9
pubmed: 22556368
Appl Environ Microbiol. 2006 Nov;72(11):7218-30
pubmed: 16980428
Nature. 2011 Nov 27;481(7379):98-101
pubmed: 22121022
Nature. 2013 Jul 25;499(7459):431-7
pubmed: 23851394
Microbiome. 2017 Aug 23;5(1):106
pubmed: 28835260
Nature. 2007 Oct 18;449(7164):898-901
pubmed: 17882164
Nature. 2016 Nov 17;539(7629):396-401
pubmed: 27749816
Nature. 2019 Apr;568(7750):108-111
pubmed: 30918404
J Phys Chem A. 2015 Jul 16;119(28):7810-37
pubmed: 25760799
Mol Ecol Resour. 2015 Nov;15(6):1403-14
pubmed: 25732605
ISME J. 2018 Aug;12(8):1929-1939
pubmed: 29662147
Front Microbiol. 2012 Dec 05;3:410
pubmed: 23227024
Appl Environ Microbiol. 1996 Feb;62(2):316-22
pubmed: 8593035
Genome Res. 2015 Jul;25(7):1043-55
pubmed: 25977477
Nature. 2015 Oct 22;526(7574):531-5
pubmed: 26375009
J Bacteriol. 1995 Aug;177(16):4757-64
pubmed: 7642503
PLoS One. 2010 Mar 10;5(3):e9490
pubmed: 20224823
Chem Rev. 2007 Feb;107(2):486-513
pubmed: 17261072
Nucleic Acids Res. 2008 Jul 1;36(Web Server issue):W5-9
pubmed: 18440982
Appl Environ Microbiol. 2002 Jun;68(6):3094-101
pubmed: 12039771
PeerJ. 2015 Oct 08;3:e1319
pubmed: 26500826
J Bacteriol. 2001 Mar;183(5):1707-15
pubmed: 11160102
Bioinformatics. 2014 Jul 15;30(14):2068-9
pubmed: 24642063
Science. 2004 Sep 3;305(5689):1457-62
pubmed: 15353801