Computation of Atmospheric Concentrations of Molecular Clusters from ab initio Thermochemistry.


Journal

Journal of visualized experiments : JoVE
ISSN: 1940-087X
Titre abrégé: J Vis Exp
Pays: United States
ID NLM: 101313252

Informations de publication

Date de publication:
08 04 2020
Historique:
entrez: 28 4 2020
pubmed: 28 4 2020
medline: 22 9 2020
Statut: epublish

Résumé

The computational study of the formation and growth of atmospheric aerosols requires an accurate Gibbs free energy surface, which can be obtained from gas phase electronic structure and vibrational frequency calculations. These quantities are valid for those atmospheric clusters whose geometries correspond to a minimum on their potential energy surfaces. The Gibbs free energy of the minimum energy structure can be used to predict atmospheric concentrations of the cluster under a variety of conditions such as temperature and pressure. We present a computationally inexpensive procedure built on a genetic algorithm-based configurational sampling followed by a series of increasingly accurate screening calculations. The procedure starts by generating and evolving the geometries of a large set of configurations using semi-empirical models then refines the resulting unique structures at a series of high-level ab initio levels of theory. Finally, thermodynamic corrections are computed for the resulting set of minimum-energy structures and used to compute the Gibbs free energies of formation, equilibrium constants, and atmospheric concentrations. We present the application of this procedure to the study of hydrated glycine clusters under ambient conditions.

Identifiants

pubmed: 32338653
doi: 10.3791/60964
doi:

Types de publication

Journal Article Research Support, Non-U.S. Gov't Research Support, U.S. Gov't, Non-P.H.S. Video-Audio Media

Langues

eng

Sous-ensembles de citation

IM

Auteurs

Tuguldur T Odbadrakh (TT)

Department of Chemistry, Furman University.

Ariel G Gale (AG)

Department of Chemistry, Furman University.

Benjamin T Ball (BT)

Department of Chemistry, Furman University.

Berhane Temelso (B)

College of Charleston; temelsob@cofc.edu.

George C Shields (GC)

Department of Chemistry, Furman University; george.shields@furman.edu.

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Classifications MeSH