tRNA elbow modifications affect the tRNA pseudouridine synthase TruB and the methyltransferase TrmA.

Escherichia coli / genetics Intramolecular Transferases / genetics Pseudouridine / genetics RNA, Transfer / genetics tRNA Methyltransferases / genetics
RNA modification methylation modification order pseudouridine tRNA

Journal

RNA (New York, N.Y.)
ISSN: 1469-9001
Titre abrégé: RNA
Pays: United States
ID NLM: 9509184

Informations de publication

Date de publication:
09 2020
Historique:
received: 25 03 2020
accepted: 04 05 2020
pubmed: 10 5 2020
medline: 6 10 2020
entrez: 10 5 2020
Statut: ppublish

Résumé

tRNAs constitute the most highly modified class of RNA. Every tRNA contains a unique set of modifications, and Ψ55, m

Identifiants

DOI: 10.1261/rna.075473.120 PMID: 32385137 PMC: PMC7430675
pubmed: 32385137
pii: rna.075473.120
doi: 10.1261/rna.075473.120
pmc: PMC7430675
doi:

Substances chimiques

Pseudouridine 1445-07-4
RNA, Transfer 9014-25-9
tRNA Methyltransferases EC 2.1.1.-
Intramolecular Transferases EC 5.4.-
pseudouridine synthases EC 5.4.99.-

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

1131-1142

Informations de copyright

© 2020 Schultz and Kothe; Published by Cold Spring Harbor Laboratory Press for the RNA Society.

Références

Mol Cell. 2006 Jan 6;21(1):87-96
pubmed: 16387656
J Mol Biol. 1981 Jan 15;145(2):405-20
pubmed: 7196457
Proc Natl Acad Sci U S A. 2019 Jan 22;116(4):1394-1403
pubmed: 30622183
Nucleic Acids Res. 2020 Feb 20;48(3):1435-1450
pubmed: 31863583
J Biol Chem. 2000 Apr 14;275(15):10727-30
pubmed: 10753862
Nucleic Acids Res. 2006 Feb 01;34(2):721-33
pubmed: 16452298
J Biol Chem. 2009 Apr 17;284(16):10324-33
pubmed: 19139092
Nat Commun. 2019 Dec 5;10(1):5542
pubmed: 31804502
Nucleic Acids Res. 2019 Sep 26;47(17):9271-9281
pubmed: 31428787
Annu Rev Genet. 2012;46:69-95
pubmed: 22905870
Cell. 2001 Dec 28;107(7):929-39
pubmed: 11779468
Nucleic Acids Res. 2014 Apr;42(6):3857-70
pubmed: 24371284
J Mol Biol. 1996 Jan 12;255(1):67-85
pubmed: 8568876
RNA. 2011 Dec;17(12):2074-84
pubmed: 21998096
Proc Natl Acad Sci U S A. 2008 May 13;105(19):6876-81
pubmed: 18451029
Cell. 1979 Sep;18(1):11-26
pubmed: 389430
Science. 1989 Mar 10;243(4896):1363-6
pubmed: 2646717
Nucleic Acids Res. 2019 Mar 18;47(5):2143-2159
pubmed: 30698754
Nucleic Acids Res. 2010 Jul;38(12):4154-62
pubmed: 20203084
Proteins. 2005 May 15;59(3):482-8
pubmed: 15789416
Proc Natl Acad Sci U S A. 2016 Dec 13;113(50):14306-14311
pubmed: 27849601
Cell. 2003 May 2;113(3):383-94
pubmed: 12732145
Biochimie. 1994;76(12):1133-42
pubmed: 7748948
Nucleic Acids Res. 2018 Jan 4;46(D1):D303-D307
pubmed: 29106616
Proteins. 2009 Aug 1;76(2):512-5
pubmed: 19373903
DNA Res. 2005;12(5):291-9
pubmed: 16769691
Translation (Austin). 2016 Jan 28;4(1):e1143076
pubmed: 27335723
Genes Cells. 2016 Jan;21(1):41-52
pubmed: 26663416
Biochemistry. 1992 Oct 27;31(42):10380-9
pubmed: 1420156
J Am Chem Soc. 2016 Jun 29;138(25):7852-5
pubmed: 27292228
IUBMB Life. 2019 Aug;71(8):1126-1140
pubmed: 30932315
Nucleic Acids Res. 1998 Jun 1;26(11):2606-10
pubmed: 9592144
RNA. 2018 Oct;24(10):1277-1284
pubmed: 30026310
Nat Commun. 2019 Jul 29;10(1):3373
pubmed: 31358763
Nucleic Acids Res. 2018 Apr 20;46(7):e37
pubmed: 29361055
Nucleic Acids Res. 2019 May 21;47(9):4736-4750
pubmed: 30931478
Nucleic Acids Res. 1995 Dec 25;23(24):5020-6
pubmed: 8559660
Nucleic Acids Res. 1997 Jul 15;25(14):2694-701
pubmed: 9207014
J Bacteriol. 2002 Oct;184(19):5348-57
pubmed: 12218021
Biochim Biophys Acta Gene Regul Mech. 2018 Apr;1861(4):409-418
pubmed: 29222069
Int J Mol Sci. 2018 Dec 17;19(12):
pubmed: 30562954
RNA. 2002 Oct;8(10):1253-66
pubmed: 12403464
Front Genet. 2019 Mar 08;10:204
pubmed: 30906314
J Biol Chem. 2001 Sep 7;276(36):33588-95
pubmed: 11443125
Anal Biochem. 1989 Nov 1;182(2):319-26
pubmed: 2610349
Biochemistry. 1988 May 17;27(10):3842-9
pubmed: 3044450

Auteurs

Sarah Kai-Leigh Schultz (SK)

Alberta RNA Research and Training Institute, Department of Chemistry and Biochemistry, University of Lethbridge, Lethbridge, AB, Canada T1K 3M4.

Ute Kothe (U)

Alberta RNA Research and Training Institute, Department of Chemistry and Biochemistry, University of Lethbridge, Lethbridge, AB, Canada T1K 3M4.
ORCID: 0000-0002-2744-7334

Articles similaires

Bioinspired gelated cell sheet-supported lactobacillus biofilm for aerobic vaginitis diagnosis and treatment.

Yueyue Gui, Qingfei Sun, Kexin Li et al.
1.00
Female Biofilms Animals Lactobacillus Mice

Prediction of strain level phage-host interactions across the Escherichia genus using only genomic information.

Baptiste Gaborieau, Hugo Vaysset, Florian Tesson et al.
1.00
Host Specificity Bacteriophages Genomics Algorithms Escherichia coli

Equine bone marrow-derived mesenchymal stromal cells reduce established S. aureus and E. coli biofilm matrix in vitro.

Sarah M Khatibzadeh, Linda A Dahlgren, Clayton C Caswell et al.
1.00
Biofilms Horses Animals Escherichia coli Mesenchymal Stem Cells

Aminoacid functionalised magnetite nanoparticles Fe

Spoială Angela, Motelica Ludmila, Ilie Cornelia-Ioana et al.
1.00
Magnetite Nanoparticles Tryptophan Biocompatible Materials Microbial Sensitivity Tests Humans

Classifications MeSH

questionsmedicales.fr › Bactéries › Proteobacteria › Gammaproteobacteria › Enterobacteriaceae › Escherichia › Escherichia coli › tRNA elbow modifications affect the tRNA...
questionsmedicales.fr › Enzymes et coenzymes › Enzymes › Isomerases › Intramolecular transferases › tRNA elbow modifications affect the tRNA...
questionsmedicales.fr › Acides nucléiques, nucléotides et nucléosides › Nucléosides › Ribonucléosides › Uridine › Pseudouridine › tRNA elbow modifications affect the tRNA...
questionsmedicales.fr › Acides nucléiques, nucléotides et nucléosides › Acides nucléiques › ARN › ARN de transfert › tRNA elbow modifications affect the tRNA...
questionsmedicales.fr › Enzymes et coenzymes › Enzymes › Transferases › One-carbon group transferases › Methyltransferases › T-RNA methyltransferases › tRNA elbow modifications affect the tRNA...