Chronic myeloid leukemia with insertion-derived BCR-ABL1 fusion: redefining complex chromosomal abnormalities by correlation of FISH and karyotype predicts prognosis.


Journal

Modern pathology : an official journal of the United States and Canadian Academy of Pathology, Inc
ISSN: 1530-0285
Titre abrégé: Mod Pathol
Pays: United States
ID NLM: 8806605

Informations de publication

Date de publication:
10 2020
Historique:
received: 17 12 2019
accepted: 24 04 2020
revised: 24 04 2020
pubmed: 15 5 2020
medline: 3 8 2021
entrez: 15 5 2020
Statut: ppublish

Résumé

Chromosomal insertion-derived BCR-ABL1 fusion is rare and mostly cryptic in chronic myeloid leukemia (CML). Most of these cases present a normal karyotype, and their risk and/or prognostic category are uncertain. We searched our database and identified 41 CML patients (20 M/21 F, median age: 47 years, range 12-78 years) with insertion-derived BCR-ABL1 confirmed by various FISH techniques: 31 in chronic phase, 1 in accelerated phase, and 9 in blast phase at time of diagnosis. Conventional cytogenetics analysis showed a normal karyotype (n = 19); abnormal karyotype with morphologically normal chromosomes 9 and 22 (n = 5); apparent ins(9;22) (n = 2) and abnormal karyotype with apparent abnormal chromosomes 9, der(9) and/or 22, der(22) (n = 15). The locations of insertion-derived BCR-ABL1 were identified on chromosome 22 (68.3%), 9 (29.3%), and 19 (2.4%). Complex chromosomal abnormalities were often overlooked by conventional cytogenetics but identified by FISH tests in many cases. After a median follow-up of 58 months (range 1-242 months), 11 patients died, and 3 lost contact, while the others achieved different cytogenetic/molecular responses. The locations of BCR-ABL1 (der(22) vs. non-der(22)) and the karyotype results (complex karyotype vs. noncomplex karyotype) by conventional cytogenetics were not associated with overall survival in this cohort. However, redefining the complexity of chromosomal abnormality by correlating karyotype and FISH findings, CML cases with simple chromosomal abnormalities had a more favorable overall survival than that with complex chromosomal abnormalities. We conclude that insertion-derived BCR-ABL1 fusions often involve complex chromosomal abnormalities which are overlooked by conventional cytogenetics, but can be identified by one or more FISH tests. We also suggest that the traditional cytogenetic response criteria may not apply in these patients, and the complexity of chromosomal abnormalities redefined by correlating karyotype and FISH findings can plays a role in stratifying patients into more suitable risk groups for predicting prognosis. (Word count: 292).

Identifiants

pubmed: 32404952
doi: 10.1038/s41379-020-0564-6
pii: S0893-3952(22)00473-2
doi:

Substances chimiques

BCR-ABL1 fusion protein, human 0
Fusion Proteins, bcr-abl EC 2.7.10.2

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

2035-2045

Commentaires et corrections

Type : ErratumIn

Références

Vardiman JW, Melo JV, Radich JP, Kvasnicka HM. Chronic myeloid leukemia, BCR-ABL1-positive. Revised 4th ed. Lyon, France: International Agency for Research on Cancer; 2017. p. 30–6.
Borowitz MJ, Chan JKC, Downing JR, Le Beau MM, Arber DA. B-lymphoblastic leukemia/lymphoma with recurrent genetic abnormalities. Revised 4th ed. Lyon, France: International Agency for Research on Cancer; 2017. p. 203–9.
Arber DA, Brunning RD, Le Beau MM, Falini B, Vardiman JW, Porwit A, et al. Acute myeloid leukemia with recurrent genetic abnormalities. Revised 4th ed. Lyon, France: International Agency for Research on Cancer; 2017. p. 130–52.
Reddy KS, Sulcova VA. FISH study of variant Philadelphia rearrangements. Cancer Genet Cytogenet. 2000;118:121–31.
pubmed: 10748292
Reid AG, Huntly BJ, Grace C, Green AR, Nacheva EP. Survival implications of molecular heterogeneity in variant Philadelphia-positive chronic myeloid leukaemia. Br J Haematol. 2003;121:419–27.
pubmed: 12716364
Albano F, Anelli L, Zagaria A, Coccaro N, Casieri P, Rossi AR, et al. Non random distribution of genomic features in breakpoint regions involved in chronic myeloid leukemia cases with variant t(9;22) or additional chromosomal rearrangements. Mol Cancer. 2010;9. https://doi.org/10.1186/1476-4598-9-120 .
Li Z, Qiao Y, Liu B, Laska EJ, Chakravarthi P, Kulko JM, et al. Combination of imatinib mesylate with autologous leukocyte-derived heat shock protein and chronic myelogenous leukemia. Clin Cancer Res. 2005;11:4460–8.
pubmed: 15958631
Gorusu M, Benn P, Li Z, Fang M. On the genesis and prognosis of variant translocations in chronic myeloid leukemia. Cancer Genet Cytogenet. 2007;173:97–106.
pubmed: 17321324
Bennour A, Sennana H, Laatiri MA, Elloumi M, Khelif A, Saad A. Molecular cytogenetic characterization of variant Philadelphia translocations in chronic myeloid leukemia: genesis and deletion of derivative chromosome 9. Cancer Genet Cytogenet. 2009;194:30–7.
pubmed: 19737651
Bonifazi F, de Vivo A, Rosti G, Guilhot F, Guilhot J, Trabacchi E, et al. Chronic myeloid leukemia and interferon-alpha: a study of complete cytogenetic responders. Blood. 2001;98:3074–81.
pubmed: 11698293
Sinclair PB, Nacheva EP, Leversha M, Telford N, Chang J, Reid A, et al. Large deletions at the t(9;22) breakpoint are common and may identify a poor-prognosis subgroup of patients with chronic myeloid leukemia. Blood. 2000;95:738–43.
pubmed: 10648381
Huntly BJ, Reid AG, Bench AJ, Campbell LJ, Telford N, Shepherd P, et al. Deletions of the derivative chromosome 9 occur at the time of the Philadelphia translocation and provide a powerful and independent prognostic indicator in chronic myeloid leukemia. Blood. 2001;98:1732–8.
pubmed: 11535505
Huntly BJ, Bench A, Green AR. Double jeopardy from a single translocation: deletions of the derivative chromosome 9 in chronic myeloid leukemia. Blood. 2003;102:1160–8.
pubmed: 12730117
Huntly BJ, Guilhot F, Reid AG, Vassiliou G, Hennig E, Franke C, et al. Imatinib improves but may not fully reverse the poor prognosis of patients with CML with derivative chromosome 9 deletions. Blood. 2003;102:2205–12.
pubmed: 12750153
Quintas-Cardama A, Kantarjian H, Talpaz M, O’Brien S, Garcia-Manero G, Verstovsek S, et al. Imatinib mesylate therapy may overcome the poor prognostic significance of deletions of derivative chromosome 9 in patients with chronic myelogenous leukemia. Blood. 2005;105:2281–6.
pubmed: 15572595
Kim DH, Popradi G, Sriharsha L, Kamel-Reid S, Chang H, Messner HA, et al. No significance of derivative chromosome 9 deletion on the clearance kinetics of BCR/ABL fusion transcripts, cytogenetic or molecular response, loss of response, or treatment failure to imatinib mesylate therapy for chronic myeloid leukemia. Cancer. 2008;113:772–81.
pubmed: 18543309
Castagnetti F, Testoni N, Luatti S, Marzocchi G, Mancini M, Kerim S, et al. Deletions of the derivative chromosome 9 do not influence the response and the outcome of chronic myeloid leukemia in early chronic phase treated with imatinib mesylate: GIMEMA CML Working Party analysis. J Clin Oncol. 2010;28:2748–54.
pubmed: 20439635
Quintas-Cardama A, Kantarjian H, Shan J, Jabbour E, Abruzzo LV, Verstovsek S, et al. Prognostic impact of deletions of derivative chromosome 9 in patients with chronic myelogenous leukemia treated with nilotinib or dasatinib. Cancer. 2011;117:5085–93.
pubmed: 21523765 pmcid: 4324753
Haigh S, Cuthbert G. Fluorescence in situ hybridization characterization of different cryptic BCR-ABL rearrangements in chronic myeloid leukemia. Cancer Genet Cytogenet. 2004;155:132–7.
pubmed: 15571798
Lazaridou A, Chase A, Melo J, Garicochea B, Diamond J, Goldman J. Lack of reciprocal translocation in BCR-ABL positive Ph-negative chronic myeloid leukaemia. Leukemia. 1994;8:454–7.
pubmed: 8127150
Hochhaus A, Reiter A, Skladny H, Melo JV, Sick C, Berger U, et al. A novel BCR-ABL fusion gene (e6a2) in a patient with Philadelphia chromosome-negative chronic myelogenous leukemia. Blood. 1996;88:2236–40.
pubmed: 8822944
Ratajczak B, Gniot M, Przybylowicz-Chalecka A, Czerwinska-Rybak J, Komarnicki M, Lewandowski K, et al. Characterization and significance of the Philadelphia negative/BCR-ABL1 positive rearrangement or masked Philadelphia translocation in patients with chronic myeloid leukemia treated with tyrosine kinase inhibitors: a single-center study. Leuk Lymphoma. 2020:189–93.
Lessard M, Duval S, Fritz A. Unusual translocation and chronic myelocytic leukemia: “masked” Philadelphia chromosome (Ph 1). Cancer Genet Cytogenet. 1981;4:237–44.
pubmed: 6947859
Huret JL. Complex translocations, simple variant translocations and Ph-negative cases in chronic myelogenous leukaemia. Hum Genet. 1990;85:565–8.
pubmed: 2227945
Morris CM, Heisterkamp N, Kennedy MA, Fitzgerald PH, Groffen J. Ph-negative chronic myeloid leukemia: molecular analysis of ABL insertion into M-BCR on chromosome 22. Blood. 1990;76:1812–8.
pubmed: 2171702
Rassool F, Martiat P, Taj A, Klisak I, Goldman J. Interstitial insertion of varying amounts of ABL-containing genetic material into chromosome 22 in Ph-negative CML. Leukemia. 1990;4:273–7.
pubmed: 2164119
Nishigaki H, Misawa S, Inazawa J, Abe T. Absence in Ph-negative, M-BCR rearrangement-positive chronic myelogenous leukemia of linkage between 5’ ABL and 3’ M-BCR sequences in Philadelphia translocation. Leukemia. 1992;6:385–92.
pubmed: 1593904
Macera MJ, Szabo P, Lin JH, DeSalvo AT, Shah HO, Verma RS. Direct visualization of the transposed ABL gene in a duplicated masked Ph chromosome. Genes Chromosomes Cancer. 1993;8:127–30.
pubmed: 7504516
Nacheva E, Holloway T, Brown K, Bloxham D, Green AR. Philadelphia-negative chronic myeloid leukaemia: detection by FISH of BCR-ABL fusion gene localized either to chromosome 9 or chromosome 22. Br J Haematol. 1994;87:409–12.
pubmed: 7947289
Mohamed AN, Ebrahim SA, Sarkar FH, Uberti J, Wolman SR. Detection of M-bcr/abl fusion by fluorescence in situ hybridization (FISH) in a case of Ph negative CML. Cancer Genet Cytogenet. 1995;80:60–2.
pubmed: 7697634
Aurich J, Dastugue N, Duchayne E, Schlaifer D, Rigal-Huguet F, Caballin MR. Location of the BCR-ABL fusion gene on the 9q34 band in two cases of Ph-positive chronic myeloid leukemia. Genes Chromosomes Cancer. 1997;20:148–54.
pubmed: 9331565
Estop AM, Sherer C, Cieply K, Groft D, Burcoglu A, Jhanwar S, et al. A Ph-negative chronic myeloid leukemia patient with a non-classical BCR-ABL rearrangement characterized by fluorescence in situ hybridization. Cancer Genet Cytogenet. 1997;96:174–6.
pubmed: 9216726
Abruzzese E, Pettenati MJ, Cox K, Jackle B, Watts RG, Carroll AJ, et al. Identification of BCR-ABL fusion on chromosome 9 by fluorescence in situ hybridization in two chronic myeloid leukemia cases. Cancer Genet Cytogenet. 1998;105:164–7.
pubmed: 9723035
Seong D, Kantarjian HM, Albitar M, Arlinghaus R, Xu J, Talpaz M, et al. Analysis of Philadelphia chromosome-negative BCR-ABL-positive chronic myelogenous leukemia by hypermetaphase fluorescence in situ hybridization. Ann Oncol. 1999;10:955–9.
pubmed: 10509158
Vieira L, Alves AC, Marques B, Reis I, Jorge G, Ambrosio AP, et al. Insertion of the 5’ part of BCR within the ABL gene at 9q34 in a Philadelphia-negative chronic myeloid leukemia. Cancer Genet Cytogenet. 1999;114:17–21.
pubmed: 10526530
Martin-Subero JI, Lahortiga I, Gomez E, Ferreira C, Larrayoz MJ, Odero MD, et al. Insertion (22;9)(q11;q34q21) in a patient with chronic myeloid leukemia characterized by fluorescence in situ hybridization. Cancer Genet Cytogenet. 2001;125:167–70.
pubmed: 11369063
Mohr B, Bornhauser M, Platzbecker U, Freiberg-Richter J, Naumann R, Prange-Krex G, et al. Problems with interphase fluorescence in situ hybridization in detecting BCR/ABL-positive cells in some patients using a novel technique with extra signals. Cancer Genet Cytogenet. 2001;127:111–7.
pubmed: 11425449
Loncarevic IF, Romer J, Starke H, Heller A, Bleck C, Ziegler M, et al. Heterogenic molecular basis for loss of ABL1-BCR transcription: deletions in der(9)t(9;22) and variants of standard t(9;22) in BCR-ABL1-positive chronic myeloid leukemia. Genes Chromosomes Cancer. 2002;34:193–200.
pubmed: 11979553
Morel F, Herry A, Le Bris MJ, Morice P, Bouquard P, Abgrall JF, et al. Contribution of fluorescence in situ hybridization analyses to the characterization of masked and complex Philadelphia chromosome translocations in chronic myelocytic leukemia. Cancer Genet Cytogenet. 2003;147:115–1120.
pubmed: 14623460
Aoun P, Wiggins M, Pickering D, Foran J, Rasheed H, Pavletic SZ, et al. Interphase fluorescence in situ hybridization studies for the detection of 9q34 deletions in chronic myelogenous leukemia: a practical approach to clinical diagnosis. Cancer Genet Cytogenet. 2004;154:138–43.
pubmed: 15474149
Monma F, Nishii K, Yamamori S, Hosokai N, Nakazaki T, Lorenzo FT, et al. Fluorescent in situ hybridization analysis of Philadelphia chromosome-negative chronic myeloid leukemia with the bcr/abl fusion gene. Int J Hematol. 2004;80:155–8.
pubmed: 15481444
Wan TS, Ma SK, Li CK, Chan LC. Atypical fluorescence in situ hybridisation pattern in chronic myeloid leukaemia due to cryptic insertion of BCR at 9q34. Leukemia. 2004;18:161–2.
pubmed: 14603334
Batista DA, Hawkins A, Murphy KM, Griffin CA. BCR/ABL rearrangement in two cases of Philadelphia chromosome negative chronic myeloid leukemia: deletion on the derivative chromosome 9 may or not be present. Cancer Genet Cytogenet. 2005;163:164–7.
pubmed: 16337861
Fugazza G, Garuti A, Marchelli S, Miglino M, Bruzzone R, Gatti AM, et al. Masked Philadelphia chromosome due to atypical BCR/ABL localization on the 9q34 band and duplication of the der(9) in a case of chronic myelogenous leukemia. Cancer Genet Cytogenet. 2005;163:173–5.
pubmed: 16337863
Valle L, Fernandez V, Perez-Pons C, Sanchez FG, Benitez J, Urioste M. Generation of the BCR/ABL fusion gene in a Philadelphia chromosome-negative chronic myeloid leukaemia: insertion of 5.6 Mb of 9q34 into the BCR region of chromosome 22. Hematol Oncol. 2006;24:86–8.
pubmed: 16598834
Struski S, Helias C, Gervais C, Leymarie V, Audhuy B, Moskovtchenko P, et al. Confirmation of a novel recurrent association: BCR-ABL t(9;22) and t(19;21). Cancer Genet Cytogenet. 2007;179:127–31.
pubmed: 18036399
Virgili A, Brazma D, Reid AG, Howard-Reeves J, Valganon M, Chanalaris A, et al. FISH mapping of Philadelphia negative BCR/ABL1 positive CML. Mol Cytogenet. 2008;1. https://doi.org/10.1186/1755-8166-1-14 .
Al-Achkar W, Liehr T, Wafa A. Insertion of the 3’ ABL region into the long arm of chromosome 1 in a Philadelphia chromosome-negative chronic myeloid leukemia case. Oncol Lett. 2010;1:951–4.
pubmed: 22870093 pmcid: 3412448
Toydemir R, Rowe L, Hibbard M, Salama M, Shetty S. Cytogenetic and molecular characterization of double inversion 3 associated with a cryptic BCR-ABL1 rearrangement and additional genetic changes. Cancer Genet Cytogenet. 2010;201:81–7.
pubmed: 20682391
Boles J, DeNicola M, Collins R, Garcia R, Patel S, Satayasoontorn K, et al. A chronic myelogenous leukemia (CML) case with a cryptic insertion of the ABL1 gene of chromosome 9 into 22 resulting in a fusion signal on the derivative 22: 46,XY.ish ins(22;9)(q11.2;q34q34)BCR+,ABL1. J Assoc Genet Technol. 2013;39:21–2.
pubmed: 26030620
Brahmbhatt MM, Trivedi PJ, Patel DM, Shukla SN, Patel PS. Location of the BCR/ABL fusion genes on both chromosomes 9 in Ph negative young cml patients: an indian experience. Indian J Hematol Blood Transfus. 2014;30:241–6.
pubmed: 25435721 pmcid: 4243418
Cattaneo D, Morotti D, Bucelli C, Cannone M, Zappa M, Guerneri S, et al. Comprehensive molecular analyses in a case of masked philadelphia chronic myeloid leukemia. Cytogenet Genome Res. 2015;147:35–40.
pubmed: 26636412
Shao L, Miller S, Keller-Ramey J, Zhang Y, Roulston D. Cytogenetic, fluorescence in situ hybridization, and genomic array characterization of chronic myeloid leukemia with cryptic BCR-ABL1 fusions. Cancer Genet. 2015;208-209:396–403.
Wang Z, Zen W, Meng F, Xin X, Luo L, Sun H, et al. Chronic myeloid leukemia with variation of translocation at (Ph) [ins (22;9) (q11;q21q34)]: a case report. Int J Clin Exp Pathol. 2015;8:13707–10.
pubmed: 26722598 pmcid: 4680543
Luatti S, Baldazzi C, Marzocchi G, Ameli G, Bochicchio MT, Soverini S, et al. Cryptic BCR-ABL fusion gene as variant rearrangement in chronic myeloid leukemia: molecular cytogenetic characterization and influence on TKIs therapy. Oncotarget. 2017;8:29906–13.
pubmed: 28404889 pmcid: 5444712
Tang Z, Li Y, Wang W, Yin CC, Tang G, Aung PP, et al. Genomic aberrations involving 12p/ETV6 are highly prevalent in blastic plasmacytoid dendritic cell neoplasms and might represent early clonal events. Leuk Res. 2018;73:86–94.
pubmed: 30248580
Tang Z, Tang G, Hu S, Patel KP, Yin CC, Wang W, et al. Deciphering the complexities of MECOM rearrangement-driven chromosomal aberrations. Cancer Genet. 2019;233-234:21–31.
pubmed: 31109591
Jean McGowan-Jordan AS, Michael Schmid. ISCN (2016): an International System for Human Cytogenetic Nomenclature. Basel, Switzerland: S. Kager AG; 2016.
Tang Z, Gu J, Tang G, Medeiros LJ. Quality assurance/quality control of fluorescence in situ hybridization tests in hematologic malignancies. OBM Genet. 2018;2:38. http://www.lidsen.com/journals/genetics/genetics-02-04-038.
Luthra R, Sanchez-Vega B, Medeiros LJ. TaqMan RT-PCR assay coupled with capillary electrophoresis for quantification and identification of bcr-abl transcript type. Mod Pathol. 2004;17:96–103.
pubmed: 14657955
Zhang L, Singh RR, Patel KP, Stingo F, Routbort M, You MJ, et al. BRAF kinase domain mutations are present in a subset of chronic myelomonocytic leukemia with wild-type RAS. Am J Hematol. 2014;89:499–504.
pubmed: 24446311 pmcid: 4207363
Radich JP, Deininger M, Abboud CN, Altman JK, Berman E, Bhatia R, et al. Chronic myeloid leukemia, version 1.2019, NCCN Clinical Practice Guidelines in Oncology. J Natl Compr Canc Netw. 2018;16:1108–35.
pubmed: 30181422
Primo D, Tabernero MD, Rasillo A, Sayagues JM, Espinosa AB, Chillon MC, et al. Patterns of BCR/ABL gene rearrangements by interphase fluorescence in situ hybridization (FISH) in BCR/ABL+ leukemias: incidence and underlying genetic abnormalities. Leukemia. 2003;17:1124–9.
pubmed: 12764379
Virgili A, Nacheva EP. Genomic amplification of BCR/ABL1 and a region downstream of ABL1 in chronic myeloid leukaemia: a FISH mapping study of CML patients and cell lines. Mol Cytogenet. 2010;3:15. https://doi.org/10.1186/1755-8166-3-15 .
doi: 10.1186/1755-8166-3-15 pubmed: 20809971 pmcid: 2944125
Hosoya N, Sanada M, Nannya Y, Nakazaki K, Wang L, Hangaishi A, et al. Genomewide screening of DNA copy number changes in chronic myelogenous leukemia with the use of high-resolution array-based comparative genomic hybridization. Genes Chromosomes Cancer. 2006;45:482–94.
pubmed: 16425296
Branford S, Hughes TP, Rudzki Z. Dual transcription of b2a2 and b3a2 BCR-ABL transcripts in chronic myeloid leukaemia is confined to patients with a linked polymorphism within the BCR gene. Br J Haematol. 2002;117:875–7.
pubmed: 12060123

Auteurs

Zhenya Tang (Z)

Department of Hematopathology, The University of Texas MD Anderson Cancer Center, Houston, TX, 77030, USA. ztang@mdanderson.org.

Gokce A Toruner (GA)

Department of Hematopathology, The University of Texas MD Anderson Cancer Center, Houston, TX, 77030, USA.

Guilin Tang (G)

Department of Hematopathology, The University of Texas MD Anderson Cancer Center, Houston, TX, 77030, USA.

C Cameron Yin (C)

Department of Hematopathology, The University of Texas MD Anderson Cancer Center, Houston, TX, 77030, USA.

Wei Wang (W)

Department of Hematopathology, The University of Texas MD Anderson Cancer Center, Houston, TX, 77030, USA.

Shimin Hu (S)

Department of Hematopathology, The University of Texas MD Anderson Cancer Center, Houston, TX, 77030, USA.

Beenu Thakral (B)

Department of Hematopathology, The University of Texas MD Anderson Cancer Center, Houston, TX, 77030, USA.

Sa A Wang (SA)

Department of Hematopathology, The University of Texas MD Anderson Cancer Center, Houston, TX, 77030, USA.

Roberto N Miranda (RN)

Department of Hematopathology, The University of Texas MD Anderson Cancer Center, Houston, TX, 77030, USA.

Joseph D Khoury (JD)

Department of Hematopathology, The University of Texas MD Anderson Cancer Center, Houston, TX, 77030, USA.

L Jeffrey Medeiros (LJ)

Department of Hematopathology, The University of Texas MD Anderson Cancer Center, Houston, TX, 77030, USA.

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