Recovery of Equilibrium Free Energy from Nonequilibrium Thermodynamics with Mechanosensitive Ion Channels in E. coli.


Journal

Physical review letters
ISSN: 1079-7114
Titre abrégé: Phys Rev Lett
Pays: United States
ID NLM: 0401141

Informations de publication

Date de publication:
05 Jun 2020
Historique:
received: 12 09 2019
accepted: 21 04 2020
entrez: 23 6 2020
pubmed: 23 6 2020
medline: 8 7 2020
Statut: ppublish

Résumé

In situ measurements of the free energy difference between the open and closed states of ion channels are challenging due to hysteresis effects and inactivation. Exploiting recent developments in statistical physics, we present a general formalism to extract the free energy difference ΔF between the closed and open states of mechanosensitive ion channels from nonequilibrium work distributions associated with the opening and closing of the channels (gating) in response to ramp stimulation protocols recorded in native patches. We show that the work distributions obtained from the gating of MscS channels in E. coli membrane satisfy the strong symmetry relation predicted by the Crooks fluctuation theorem. Our approach enables the determination of ΔF using patch-clamp experiments, which are often inherently restricted to the nonequilibrium regime.

Identifiants

pubmed: 32567892
doi: 10.1103/PhysRevLett.124.228101
doi:

Substances chimiques

Ion Channels 0

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

228101

Auteurs

Uğur Çetiner (U)

Institute for Physical Science and Technology, University of Maryland, College Park, Maryland 20742, USA.
Maryland Biophysics Program, University of Maryland, College Park, Maryland 20742, USA.
Department of Biology, University of Maryland, College Park, Maryland 20742, USA.

Oren Raz (O)

Department of Physics of Complex Systems, Faculty of Physics, Weizmann Institute of Science, Rehovot 7610001, Israel.

Sergei Sukharev (S)

Institute for Physical Science and Technology, University of Maryland, College Park, Maryland 20742, USA.
Maryland Biophysics Program, University of Maryland, College Park, Maryland 20742, USA.
Department of Biology, University of Maryland, College Park, Maryland 20742, USA.

Christopher Jarzynski (C)

Institute for Physical Science and Technology, University of Maryland, College Park, Maryland 20742, USA.
Maryland Biophysics Program, University of Maryland, College Park, Maryland 20742, USA.
Department of Chemistry and Biochemistry, University of Maryland, College Park, Maryland 20742, USA.
Department of Physics, University of Maryland, College Park, Maryland 20742, USA.

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