Pseudoscorpion Wolbachia symbionts: diversity and evidence for a new supergroup S.


Journal

BMC microbiology
ISSN: 1471-2180
Titre abrégé: BMC Microbiol
Pays: England
ID NLM: 100966981

Informations de publication

Date de publication:
30 06 2020
Historique:
received: 24 01 2020
accepted: 18 06 2020
entrez: 2 7 2020
pubmed: 2 7 2020
medline: 20 7 2021
Statut: epublish

Résumé

Wolbachia are the most widely spread endosymbiotic bacteria, present in a wide variety of insects and two families of nematodes. As of now, however, relatively little genomic data has been available. The Wolbachia symbiont can be parasitic, as described for many arthropod systems, an obligate mutualist, as in filarial nematodes or a combination of both in some organisms. They are currently classified into 16 monophyletic lineage groups ("supergroups"). Although the nature of these symbioses remains largely unknown, expanded Wolbachia genomic data will contribute to understanding their diverse symbiotic mechanisms and evolution. This report focuses on Wolbachia infections in three pseudoscorpion species infected by two distinct groups of Wolbachia strains, based upon multi-locus phylogenies. Geogarypus minor harbours wGmin and Chthonius ischnocheles harbours wCisc, both closely related to supergroup H, while Atemnus politus harbours wApol, a member of a novel supergroup S along with Wolbachia from the pseudoscorpion Cordylochernes scorpioides (wCsco). Wolbachia supergroup S is most closely related to Wolbachia supergroups C and F. Using target enrichment by hybridization with Wolbachia-specific biotinylated probes to capture large fragments of Wolbachia DNA, we produced two draft genomes of wApol. Annotation of wApol highlights presence of a biotin operon, which is incomplete in many sequenced Wolbachia genomes. The present study highlights at least two symbiont acquisition events among pseudoscorpion species. Phylogenomic analysis indicates that the Wolbachia from Atemnus politus (wApol), forms a separate supergroup ("S") with the Wolbachia from Cordylochernes scorpioides (wCsco). Interestingly, the biotin operon, present in wApol, appears to have been horizontally transferred multiple times along Wolbachia evolutionary history.

Sections du résumé

BACKGROUND
Wolbachia are the most widely spread endosymbiotic bacteria, present in a wide variety of insects and two families of nematodes. As of now, however, relatively little genomic data has been available. The Wolbachia symbiont can be parasitic, as described for many arthropod systems, an obligate mutualist, as in filarial nematodes or a combination of both in some organisms. They are currently classified into 16 monophyletic lineage groups ("supergroups"). Although the nature of these symbioses remains largely unknown, expanded Wolbachia genomic data will contribute to understanding their diverse symbiotic mechanisms and evolution.
RESULTS
This report focuses on Wolbachia infections in three pseudoscorpion species infected by two distinct groups of Wolbachia strains, based upon multi-locus phylogenies. Geogarypus minor harbours wGmin and Chthonius ischnocheles harbours wCisc, both closely related to supergroup H, while Atemnus politus harbours wApol, a member of a novel supergroup S along with Wolbachia from the pseudoscorpion Cordylochernes scorpioides (wCsco). Wolbachia supergroup S is most closely related to Wolbachia supergroups C and F. Using target enrichment by hybridization with Wolbachia-specific biotinylated probes to capture large fragments of Wolbachia DNA, we produced two draft genomes of wApol. Annotation of wApol highlights presence of a biotin operon, which is incomplete in many sequenced Wolbachia genomes.
CONCLUSIONS
The present study highlights at least two symbiont acquisition events among pseudoscorpion species. Phylogenomic analysis indicates that the Wolbachia from Atemnus politus (wApol), forms a separate supergroup ("S") with the Wolbachia from Cordylochernes scorpioides (wCsco). Interestingly, the biotin operon, present in wApol, appears to have been horizontally transferred multiple times along Wolbachia evolutionary history.

Identifiants

pubmed: 32605600
doi: 10.1186/s12866-020-01863-y
pii: 10.1186/s12866-020-01863-y
pmc: PMC7325362
doi:

Substances chimiques

Biotin 6SO6U10H04

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

188

Subventions

Organisme : New England Biolabs
ID : -
Pays : International

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Auteurs

Emilie Lefoulon (E)

Molecular Parasitology Group, Molecular Enzyme Division, New England Biolabs, Inc., Ipswich, USA.
School of Animal and Comparative Biomedical Sciences, University of Arizona, Tucson, USA.

Travis Clark (T)

Molecular Parasitology Group, Molecular Enzyme Division, New England Biolabs, Inc., Ipswich, USA.

Fanni Borveto (F)

ISEM, University of Montpellier, Montpellier, France.

Marco Perriat-Sanguinet (M)

ISEM, University of Montpellier, Montpellier, France.

Catherine Moulia (C)

ISEM, University of Montpellier, Montpellier, France.

Barton E Slatko (BE)

Molecular Parasitology Group, Molecular Enzyme Division, New England Biolabs, Inc., Ipswich, USA. slatko@neb.com.

Laurent Gavotte (L)

ISEM, University of Montpellier, Montpellier, France.

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