In Silico Prediction of Human Leukocytes Antigen (HLA) Class II Binding Hepatitis B Virus (HBV) Peptides in Botswana.


Journal

Viruses
ISSN: 1999-4915
Titre abrégé: Viruses
Pays: Switzerland
ID NLM: 101509722

Informations de publication

Date de publication:
06 07 2020
Historique:
received: 12 06 2020
accepted: 03 07 2020
entrez: 10 7 2020
pubmed: 10 7 2020
medline: 23 2 2021
Statut: epublish

Résumé

Hepatitis B virus (HBV) is the primary cause of liver-related malignancies worldwide, and there is no effective cure for chronic HBV infection (CHB) currently. Strong immunological responses induced by T cells are associated with HBV clearance during acute infection; however, the repertoire of epitopes (

Identifiants

pubmed: 32640609
pii: v12070731
doi: 10.3390/v12070731
pmc: PMC7412261
pii:
doi:

Substances chimiques

Epitopes, T-Lymphocyte 0
HLA Antigens 0
Hepatitis B Surface Antigens 0

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Références

J Hepatol. 2013 Sep;59(3):450-6
pubmed: 23669281
Gastroenterology. 2019 Jul;157(1):227-241.e7
pubmed: 30930022
Vaccine. 2013 Sep 13;31(40):4355-61
pubmed: 23887040
Open Biol. 2013 Jan 08;3(1):120139
pubmed: 23303307
N Engl J Med. 1995 Apr 20;332(16):1065-9
pubmed: 7898524
J Viral Hepat. 2016 Jan;23(1):5-14
pubmed: 26280668
World J Gastroenterol. 2016 Jan 7;22(1):126-44
pubmed: 26755865
Dent Update. ;44(4):322-4, 327
pubmed: 29172358
BMC Bioinformatics. 2014;15 Suppl 4:S2
pubmed: 25104313
Lancet. 2015 Oct 17;386(10003):1546-55
pubmed: 26231459
PLoS One. 2015 Jul 28;10(7):e0134037
pubmed: 26218239
World J Gastroenterol. 2012 Jun 28;18(24):3119-28
pubmed: 22791948
Hepatology. 2005 Jul;42(1):93-103
pubmed: 15962285
Dig Dis Sci. 2002 Oct;47(10):2139-50
pubmed: 12395884
Genes (Basel). 2018 Sep 07;9(9):
pubmed: 30205537
Virol J. 2018 Sep 3;15(1):137
pubmed: 30176885
World J Hepatol. 2014 Nov 27;6(11):783-92
pubmed: 25429316
Curr Opin Virol. 2017 Apr;23:75-81
pubmed: 28453967
Bioinformatics. 2014 Nov 15;30(22):3276-8
pubmed: 25095880
Hepatology. 2005 Jun;41(6):1383-90
pubmed: 15915462
N Engl J Med. 1998 Dec 24;339(26):1905-13
pubmed: 9862947
Vaccine. 2017 Apr 25;35(18):2308-2314
pubmed: 28351734
Pathol Biol (Paris). 2010 Aug;58(4):258-66
pubmed: 20116937
PLoS One. 2013 Jul 30;8(7):e70169
pubmed: 23936156
J Biomed Biotechnol. 2010;2010:705821
pubmed: 20508817
J Hepatol. 2016 Sep;65(3):509-16
pubmed: 27210427
Hepatogastroenterology. 1989 Oct;36(5):363-6
pubmed: 2620904
Sci Transl Med. 2018 Mar 21;10(433):
pubmed: 29563320
Cell. 2006 Feb 24;124(4):767-82
pubmed: 16497587
World J Gastroenterol. 2003 Oct;9(10):2221-5
pubmed: 14562382
J Immunol Res. 2016;2016:9069375
pubmed: 27243039
Lancet. 2001 Jun 2;357(9270):1777-89
pubmed: 11403834
Hepatology. 2002 May;35(5):1274-6
pubmed: 11981779
J Med Virol. 2006;78 Suppl 1:S59-65
pubmed: 16622880
BMC Bioinformatics. 2007 Jan 05;8:4
pubmed: 17207271
J Immunol. 1985 Jun;134(6):4203-11
pubmed: 2580909
Curr Opin Immunol. 2003 Aug;15(4):461-70
pubmed: 12900280
BMC Infect Dis. 2009 Sep 08;9:149
pubmed: 19737394
Clin Dev Immunol. 2012;2012:925135
pubmed: 22474485
Biochem Genet. 2011 Apr;49(3-4):258-69
pubmed: 21188498
Front Immunol. 2017 Jan 23;8:19
pubmed: 28167943
Methods Mol Biol. 2009;524:417-26
pubmed: 19377962
Proc Natl Acad Sci U S A. 1981 Jun;78(6):3403-7
pubmed: 6167985
Adv Protein Chem Struct Biol. 2015;99:131-53
pubmed: 26067819
World J Gastroenterol. 2013 Sep 7;19(33):5395-401
pubmed: 24023482
N Engl J Med. 2000 Sep 7;343(10):702-9
pubmed: 10974135
Eur J Immunol. 2001 Dec;31(12):3816-24
pubmed: 11745403
J Clin Invest. 1991 Jul;88(1):214-22
pubmed: 1711541
Microbes Infect. 2006 Oct;8(12-13):2783-90
pubmed: 17045504
Springerplus. 2016 Oct 28;5(1):1896
pubmed: 27843753
J Virol. 2003 Jan;77(1):68-76
pubmed: 12477811
Methods Enzymol. 1989;178:586-611
pubmed: 2601631
J Immunol. 2004 Nov 1;173(9):5863-71
pubmed: 15494540
Immunology. 2018 Jul;154(3):394-406
pubmed: 29315598
J Hepatol. 2020 Jan;72(1):45-56
pubmed: 31499130
Vaccine. 2014 Sep 3;32(39):4925-31
pubmed: 25045824
Hum Vaccin Immunother. 2017 Sep 2;13(9):1989-1996
pubmed: 28665747
Virus Genes. 2019 Feb;55(1):33-42
pubmed: 30382563
J Hepatol. 2014 Aug;61(2):408-17
pubmed: 24801416
Nucleic Acids Res. 2019 Jan 8;47(D1):D339-D343
pubmed: 30357391
Genes (Basel). 2018 Aug 21;9(9):
pubmed: 30134551
Clin Diagn Lab Immunol. 2005 Sep;12(9):1020-8
pubmed: 16148166
J Virol. 2003 Nov;77(22):12083-7
pubmed: 14581545
BMC Infect Dis. 2015 Aug 13;15:335
pubmed: 26268355
Clin Liver Dis. 2004 May;8(2):321-52, vi
pubmed: 15481343
Gut. 2020 Feb;69(2):343-354
pubmed: 30926653
J Clin Microbiol. 2011 Mar;49(3):1165-8
pubmed: 21209167
World J Gastroenterol. 2004 Jul 1;10(13):1902-6
pubmed: 15222033
Viruses. 2017 May 16;9(5):
pubmed: 28509875
Arch Virol. 2019 Feb;164(2):483-495
pubmed: 30415392
Genes (Basel). 2018 May 17;9(5):
pubmed: 29772814
Hepatology. 2016 Jan;63(1):284-306
pubmed: 26566246
Nucleic Acids Res. 2012 Jul;40(Web Server issue):W597-603
pubmed: 22661580
J Infect Dis. 1999 Apr;179(4):1004-6
pubmed: 10068598
Antiviral Res. 2007 Aug;75(2):113-20
pubmed: 17343928
NPJ Vaccines. 2019 Jul 19;4:30
pubmed: 31341647
Ann Surg Treat Res. 2018 Sep;95(3):147-151
pubmed: 30182021
J Clin Microbiol. 2013 Jan;51(1):163-8
pubmed: 23115258
PLoS One. 2014 Jan 22;9(1):e80445
pubmed: 24465366
Gut. 1999 May;44(5):759-64
pubmed: 10205220
J Exp Med. 2000 Apr 17;191(8):1263-8
pubmed: 10770794
Jpn J Infect Dis. 2012;65(6):476-82
pubmed: 23183198
J Pak Med Assoc. 2002 Jun;52(6):253-6
pubmed: 12503591
Lancet Gastroenterol Hepatol. 2017 Dec;2(12):900-909
pubmed: 29132759
Arch Immunol Ther Exp (Warsz). 2010 Apr;58(2):121-30
pubmed: 20155490
PLoS One. 2014 Jul 22;9(7):e101904
pubmed: 25051027
Virology. 2011 Mar 15;411(2):216-28
pubmed: 21236461
Immunol Cell Biol. 2007 Jan;85(1):16-23
pubmed: 17130898

Auteurs

Wonderful Tatenda Choga (WT)

Research Laboratory, Botswana Harvard AIDS Institute Partnership, Gaborone 0000, Botswana.
Division of Human Genetics, Department of Pathology, Faculty of Health Sciences, University of Cape Town, Cape Town 7925, South Africa.

Motswedi Anderson (M)

Research Laboratory, Botswana Harvard AIDS Institute Partnership, Gaborone 0000, Botswana.

Edward Zumbika (E)

Department of Applied Biology and Biochemistry, Faculty of Applied Sciences, National University of Science and Technology, Bulawayo 0000, Zimbabwe.

Bonolo B Phinius (BB)

Research Laboratory, Botswana Harvard AIDS Institute Partnership, Gaborone 0000, Botswana.

Tshepiso Mbangiwa (T)

Research Laboratory, Botswana Harvard AIDS Institute Partnership, Gaborone 0000, Botswana.
Division of Human Genetics, Department of Pathology, Faculty of Health Sciences, University of Cape Town, Cape Town 7925, South Africa.

Lynnette N Bhebhe (LN)

Research Laboratory, Botswana Harvard AIDS Institute Partnership, Gaborone 0000, Botswana.

Kabo Baruti (K)

Research Laboratory, Botswana Harvard AIDS Institute Partnership, Gaborone 0000, Botswana.
Department of Biological Sciences, Faculty of Science, University of Botswana, Gaborone 0000, Botswana.

Peter Opiyo Kimathi (PO)

Centre for Proteomic and Genomic Research, Cape Town 7925, South Africa.

Kaelo K Seatla (KK)

Research Laboratory, Botswana Harvard AIDS Institute Partnership, Gaborone 0000, Botswana.
Department of Medical Laboratory Sciences, Faculty of Health Sciences, University of Botswana, Gaborone 0000, Botswana.

Rosemary M Musonda (RM)

Research Laboratory, Botswana Harvard AIDS Institute Partnership, Gaborone 0000, Botswana.
Department of Immunology and Infectious Diseases, Harvard T.H. Chan School of Public Health, Boston, MA 02115, USA.

Trevor Graham Bell (TG)

P.O. Box 497, Wits, Johannesburg 2050, South Africa.

Sikhulile Moyo (S)

Research Laboratory, Botswana Harvard AIDS Institute Partnership, Gaborone 0000, Botswana.
Department of Immunology and Infectious Diseases, Harvard T.H. Chan School of Public Health, Boston, MA 02115, USA.

Jason T Blackard (JT)

Division of Digestive Diseases, University of Cincinnati College of Medicine, Cincinnati, OH 45267, USA.

Simani Gaseitsiwe (S)

Research Laboratory, Botswana Harvard AIDS Institute Partnership, Gaborone 0000, Botswana.
Department of Immunology and Infectious Diseases, Harvard T.H. Chan School of Public Health, Boston, MA 02115, USA.

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