A cost-effectiveness analysis of genomic sequencing in a prospective versus historical cohort of complex pediatric patients.

cost-effectiveness exome sequencing genomic sequencing monogenic pediatric

Journal

Genetics in medicine : official journal of the American College of Medical Genetics
ISSN: 1530-0366
Titre abrégé: Genet Med
Pays: United States
ID NLM: 9815831

Informations de publication

Date de publication:
12 2020
Historique:
received: 23 04 2020
accepted: 27 07 2020
revised: 23 07 2020
pubmed: 11 8 2020
medline: 28 4 2021
entrez: 11 8 2020
Statut: ppublish

Résumé

Cost-effectiveness evaluations of first-line genomic sequencing (GS) in the diagnosis of children with genetic conditions are limited by the lack of well-defined comparative cohorts. We sought to evaluate the cost-effectiveness of early GS in pediatric patients with complex monogenic conditions compared with a matched historical cohort. Data, including investigation costs, were collected in a prospective cohort of 92 pediatric patients undergoing singleton GS over an 18-month period (2016-2017) with two of the following: a condition with high mortality, multisystem disease involving three or more organs, or severe limitation of daily function. Comparative data were collected in a matched historical cohort who underwent traditional investigations in the years 2012-2013. GS yielded a diagnosis in 42% while traditional investigations yielded a diagnosis in 23% (p = 0.003). A change in management was experienced by 74% of patients diagnosed following GS, compared with 32% diagnosed following traditional investigations. Singleton GS at a cost of AU$3100 resulted in a mean saving per person of AU$3602 (95% confidence interval [CI] AU$2520-4685). Cost savings occurred across all investigation subtypes and were only minimally offset by clinical management costs. GS in complex pediatric patients saves significant costs and doubles the diagnostic yield of traditional approaches.

Identifiants

pubmed: 32773771
doi: 10.1038/s41436-020-0929-8
pii: S1098-3600(21)00822-4
doi:

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

1986-1993

Références

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Auteurs

Alison Yeung (A)

Victorian Clinical Genetics Services, Murdoch Children's Research Institute, Melbourne, Australia. alison.yeung@vcgs.org.au.
Melbourne Genomics Health Alliance, Melbourne, Australia. alison.yeung@vcgs.org.au.
Department of Pediatrics, University of Melbourne, Melbourne, Australia. alison.yeung@vcgs.org.au.

Natalie B Tan (NB)

Victorian Clinical Genetics Services, Murdoch Children's Research Institute, Melbourne, Australia.

Tiong Y Tan (TY)

Victorian Clinical Genetics Services, Murdoch Children's Research Institute, Melbourne, Australia.
Melbourne Genomics Health Alliance, Melbourne, Australia.
Department of Pediatrics, University of Melbourne, Melbourne, Australia.

Zornitza Stark (Z)

Victorian Clinical Genetics Services, Murdoch Children's Research Institute, Melbourne, Australia.
Melbourne Genomics Health Alliance, Melbourne, Australia.
Department of Pediatrics, University of Melbourne, Melbourne, Australia.

Natasha Brown (N)

Victorian Clinical Genetics Services, Murdoch Children's Research Institute, Melbourne, Australia.
Department of Pediatrics, University of Melbourne, Melbourne, Australia.

Matthew F Hunter (MF)

Monash Genetics, Monash Health, Melbourne, Australia.
Department of Pediatrics, Monash University, Melbourne, Australia.

Martin Delatycki (M)

Victorian Clinical Genetics Services, Murdoch Children's Research Institute, Melbourne, Australia.
Department of Pediatrics, University of Melbourne, Melbourne, Australia.

Chloe Stutterd (C)

Victorian Clinical Genetics Services, Murdoch Children's Research Institute, Melbourne, Australia.
Department of Pediatrics, University of Melbourne, Melbourne, Australia.

Ravi Savarirayan (R)

Victorian Clinical Genetics Services, Murdoch Children's Research Institute, Melbourne, Australia.
Department of Pediatrics, University of Melbourne, Melbourne, Australia.

George Mcgillivray (G)

Victorian Clinical Genetics Services, Murdoch Children's Research Institute, Melbourne, Australia.

Rachel Stapleton (R)

Victorian Clinical Genetics Services, Murdoch Children's Research Institute, Melbourne, Australia.

Smitha Kumble (S)

Victorian Clinical Genetics Services, Murdoch Children's Research Institute, Melbourne, Australia.

Lilian Downie (L)

Victorian Clinical Genetics Services, Murdoch Children's Research Institute, Melbourne, Australia.
Department of Pediatrics, University of Melbourne, Melbourne, Australia.

Matthew Regan (M)

Monash Genetics, Monash Health, Melbourne, Australia.
Department of Pediatrics, Monash University, Melbourne, Australia.

Sebastian Lunke (S)

Victorian Clinical Genetics Services, Murdoch Children's Research Institute, Melbourne, Australia.

Belinda Chong (B)

Victorian Clinical Genetics Services, Murdoch Children's Research Institute, Melbourne, Australia.

Dean Phelan (D)

Victorian Clinical Genetics Services, Murdoch Children's Research Institute, Melbourne, Australia.

Gemma R Brett (GR)

Victorian Clinical Genetics Services, Murdoch Children's Research Institute, Melbourne, Australia.
Melbourne Genomics Health Alliance, Melbourne, Australia.
Department of Pediatrics, University of Melbourne, Melbourne, Australia.

Anna Jarmolowicz (A)

Victorian Clinical Genetics Services, Murdoch Children's Research Institute, Melbourne, Australia.
Melbourne Genomics Health Alliance, Melbourne, Australia.

Yael Prawer (Y)

Melbourne Genomics Health Alliance, Melbourne, Australia.
Monash Genetics, Monash Health, Melbourne, Australia.
Department of Pediatrics, Monash University, Melbourne, Australia.

Giulia Valente (G)

Melbourne Genomics Health Alliance, Melbourne, Australia.
Genetics in the North East, Austin Health, Melbourne, Australia.

Yana Smagarinsky (Y)

Victorian Clinical Genetics Services, Murdoch Children's Research Institute, Melbourne, Australia.
Melbourne Genomics Health Alliance, Melbourne, Australia.

Melissa Martyn (M)

Melbourne Genomics Health Alliance, Melbourne, Australia.
Department of Pediatrics, University of Melbourne, Melbourne, Australia.
Murdoch Children's Research Institute, Melbourne, Australia.

Callum McEwan (C)

Melbourne Genomics Health Alliance, Melbourne, Australia.

Ilias Goranitis (I)

Murdoch Children's Research Institute, Melbourne, Australia.
Centre for Health Policy, Melbourne School of Population and Global Health, University of Melbourne, Melbourne, Australia.
Australian Genomics Health Alliance, Melbourne, Australia.

Clara Gaff (C)

Melbourne Genomics Health Alliance, Melbourne, Australia.
Department of Pediatrics, University of Melbourne, Melbourne, Australia.
Murdoch Children's Research Institute, Melbourne, Australia.

Susan M White (SM)

Victorian Clinical Genetics Services, Murdoch Children's Research Institute, Melbourne, Australia.
Melbourne Genomics Health Alliance, Melbourne, Australia.
Department of Pediatrics, University of Melbourne, Melbourne, Australia.

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