Genetic diversity of mitochondrial cytochrome b gene in swamp buffalo.
cytb
buffalo
genetic diversity
phylogeny
Journal
Animal genetics
ISSN: 1365-2052
Titre abrégé: Anim Genet
Pays: England
ID NLM: 8605704
Informations de publication
Date de publication:
Dec 2020
Dec 2020
Historique:
received:
13
03
2020
revised:
12
07
2020
accepted:
18
08
2020
pubmed:
11
9
2020
medline:
24
3
2021
entrez:
10
9
2020
Statut:
ppublish
Résumé
The swamp buffalo (Bubalus carabanensis) is mainly bred for meat, transport and rice cultivation in China and Southeast Asian countries. In the current study, we investigated the genetic diversity, maternal origin and phylogenetic relationship of swamp buffalo by analyzing 1,786 mitochondrial cytochrome b (cytb) sequences from China, Vietnam, Laos, Thailand, India and Bangladesh. Our results indicated that the swamp buffalo can be divided into two major lineages (SA and SB with the sublineages) and three rare lineages (SC, SD and SE), which showed strong geographic differentiation. The SA1 lineage represented a major domestication event, which involved population expansion. Regions III and V showed higher haplotype diversity than the other regions, indicating that the regions of Southwest China and IndoChina are potential domestication centers for the swamp buffalo. In addition, the swamp buffalo showed a closer phylogenetic relationship to tamaraw. In conclusion, our findings revealed a high level of genetic diversity and the phylogenetic pattern of the swamp buffalo.
Substances chimiques
Cytochromes b
9035-37-4
Types de publication
Journal Article
Langues
eng
Sous-ensembles de citation
IM
Pagination
977-981Subventions
Organisme : the National Natural Science Foundation of China
ID : 31272399
Organisme : the National Beef Cattle and Yak Industrial Technology System
ID : CARS-37
Informations de copyright
© 2020 Stichting International Foundation for Animal Genetics.
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