Real-time clinical note monitoring to detect conditions for rapid follow-up: A case study of clinical trial enrollment in drug-induced torsades de pointes and Stevens-Johnson syndrome.
data mining
electronic health records
natural language processing
patient selection
precision medicine
rare diseases
Journal
Journal of the American Medical Informatics Association : JAMIA
ISSN: 1527-974X
Titre abrégé: J Am Med Inform Assoc
Pays: England
ID NLM: 9430800
Informations de publication
Date de publication:
15 01 2021
15 01 2021
Historique:
received:
17
04
2020
revised:
07
07
2020
accepted:
20
08
2020
pubmed:
30
10
2020
medline:
8
6
2021
entrez:
29
10
2020
Statut:
ppublish
Résumé
Identifying acute events as they occur is challenging in large hospital systems. Here, we describe an automated method to detect 2 rare adverse drug events (ADEs), drug-induced torsades de pointes and Stevens-Johnson syndrome and toxic epidermal necrolysis, in near real time for participant recruitment into prospective clinical studies. A text processing system searched clinical notes from the electronic health record (EHR) for relevant keywords and alerted study personnel via email of potential patients for chart review or in-person evaluation. Between 2016 and 2018, the automated recruitment system resulted in capture of 138 true cases of drug-induced rare events, improving recall from 43% to 93%. Our focused electronic alert system maintained 2-year enrollment, including across an EHR migration from a bespoke system to Epic. Real-time monitoring of EHR notes may accelerate research for certain conditions less amenable to conventional study recruitment paradigms.
Identifiants
pubmed: 33120413
pii: 5943222
doi: 10.1093/jamia/ocaa213
pmc: PMC7810433
doi:
Types de publication
Journal Article
Research Support, N.I.H., Extramural
Langues
eng
Sous-ensembles de citation
IM
Pagination
126-131Subventions
Organisme : NIGMS NIH HHS
ID : P50 GM115305
Pays : United States
Organisme : NLM NIH HHS
ID : T15 LM007450
Pays : United States
Informations de copyright
© The Author(s) 2020. Published by Oxford University Press on behalf of the American Medical Informatics Association. All rights reserved. For permissions, please email: journals.permissions@oup.com.
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